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The map label for this gene is yjcF [C]

Identifier: 157372424

GI number: 157372424

Start: 4643249

End: 4645783

Strand: Reverse

Name: yjcF [C]

Synonym: Spro_4191

Alternate gene names: 157372424

Gene position: 4645783-4643249 (Counterclockwise)

Preceding gene: 157372432

Following gene: 157372423

Centisome position: 85.26

GC content: 57.4

Gene sequence:

>2535_bases
ATGAAGATTATTAAGCCGCTGCGTCTGAGCGTATTAAATCGACCTTTCCGCCAGCAGGGTAAAAATTATCTCGGCGTTTC
TGTGATGGCACTGCTGGATATGGGCACAACGCCCCAGCTGCGTCCGGAAGTGGAATTATGGCAACTGGCGGCGGAAGAAC
TGCAAACCAGTGGCGGCGTCATTGATGTGGCCATTCCGAAAGTCCGGGCTGAATTTCTGGCGACGGGTAATGCTTATACC
CGTCATCAGAAGGAAAAAAACAGCTGCGCAGTGCGCATTGACGTGGGCAGCCTCAGCAAGACCCTGGTGGCTTTTGGCGA
TCGTTTCTGGTCTGGTTCGCAGCCGACCCCGCCACGCAATTTTGAGTCGATGCGCCTTGACTGGAGCCGTGCTTTCGGCG
GCGCAGGATACGAAGAGAACCCTCATGGTATTGGCGCCGTGGAAGAGCAGCACAACGGCGCGGCTTTTCGTCGCCTGCCA
AATATCGAACCGCTACATCAACGTATGACCTCACCGCGGCAGCAGCCCGAGCCGGTAAGTTTTGGGCCGCTGGACATGAC
CTGGCCGCGTCGTTTTAAGCGCATGGGCAAAGCCTATGACGCCAACTGGCTGAAAAATGACTTTCCAGGCCTGGCCCGCG
ACGCCGACTGGCGTGTATTCAATGCCGCCAGCCCGGACCAATGGTGGCCGGAACAAGATGAGCTGCCGCCTGAGGCCGAG
TGGCGCATTTGGAATATGCATCCGGAAAAACCGCTACAGTCGGGCAAACTGCCGCCATGGCGGGCGCGCTGTTTTATCAA
TCGTCAGCGTGGGGATGAAACGCTGTTTGAAGAGATTAGGTTGCGTGCCACCACGGTCTGGTTCTTCCCGCATCGGCAAC
AGATGATGCTGATCTGGCAGGGCAGTGGCCGCATTAACGAGGATGATGCGGCGGATGTGCTGCAACTGATGCCGGCGCTG
GAGAAAAACGGCGCCGCTCGTTCGGCCAATCACTATCGCAAGGTGTTGGCCCAGCGGCTGGATAAAGGGAAGGGGGCGCT
GTTTGCCTTCCGTGAAAAAGATTTGTTGCCGGAAGAGCTTATCGGTCCCTGGATTGACAGCGAAATGCAGCAAACAGAAA
GCCCGATGCAAAACAATATGCAAAACCGGGTAAGTAAAATACGCGAACAGCACCGCGCCAGGCTTGAGGCTGAAGGGCGG
GATGTTAACGAGCTACTGGCGGATATGTCGCAGCCAGAGATGCCGAGGCTGGATGAACTGCCGGAGTTTGTCGAACGACT
GGAGCGCCAGGCTGAGGAGATGAAAGCGCAGGCTGAGGCGCGCCAGGCTGAAGTGGAAGCCCGCCAGGGTGCCAAACAGG
ACTCACGGCCGCGTGGCCCGGAATCAATGCACCGTATGCAGGAGATGCTGCATCAACATGCGGACAGTATGACGGCGAAG
AAATTGGCGCAGAGCCGCGAATCGCTGCACCAGATGTATCTGATGGCAGCCCAGCATCAACCGCCGGCGCAACGCATGAC
GGGGGATATTGCCCGGATTATTCGCCAGCGCGCTTCGAACACCATGGCGTGCGGAGGGGACTTTAGCGAGTTGGATTTCA
CCGGCGCGAACCTCTCCGGCATGGATTTTCGCGGCGCTAATTTCCGTAAGGCGTTGCTGGAAAGCGCCGATCTCAGCGGT
TGTCAGTTGGACGGCGCTGATTTTAGCGAGGCGATGCTGGCGCGAACCGATTTGCGCAACAGTTCGCTGCGTGAATGCAA
TCTGACCAAAGCCAGCCTGGCGTTGGCCCAGTGCCGACAGACCGATTTTAGCGGCGCCAACCTGACGGAAACCCAACTGG
AAGACGCGCTGTTTGAAGACTGTGACTTCAGCCGTGCCACGCTAAAAACGCTATTGCTGCGCCAGGTCGGTATTAGCCAT
TGCCGTTTCCACCGTGCGGAGCTGGAGGAGTGTATCGTTATGAATTTAACGCTGCCGCAGCTCGATTTCAGCGAGGCCAG
GCTGCGTAAGACCGTCTTCCAACAGTGCGAGTTGCAGGCTGCGGTCTTCAACGGTGCGTGGCTTGAGAGCTGTAACTGGG
TGGAGAGCAAACTGCCGTACGCCCAGTTTAAAGCGGCCAGCCTGCTGACCTGCGCAGCCGTAATGGAGAGTGACTTAAGC
GGCGCGGACTTTAGCGAAGCAACGCTGAAAGAAAGTAATCTGCGCCAGGCTTTGCTTACGCAGGCGAACTTTACGTTGGC
GAAGGTGGAGAACAGCGATCTCAGCGAGGCGGACTGTCAGAGGGCGAATTTCACCCGCGCCAACCTGGTCGGGAGCCTGT
TGATCCGCACTGATTTCCGTCAGGTCAATTTCACCGGAGCCAACCTGATGGGCGCACTGATGCAGAAAACCCAACTGGGC
GGCGCGGACTTTACCGCTGCCAATCTGTTCCGCGCCGATCTGTCACAATCCTTTATTAATATGGAGACGCGGCTGGACAA
CGCCTATACCAGCCGGGTGAAGACTCTGCCGAAGCGGGATGAGGAACTGTCATGA

Upstream 100 bases:

>100_bases
CATCTTGCACTGATTAGGTTAATGCGATAGAAAACCTAGACAGATGTATTATCCCCCTTTTTAAGCGCGTTCATTAACTG
GCTGCCTAAAGGCGCATTAT

Downstream 100 bases:

>100_bases
CGACGCTGAGCGCGGCAGAGCTACAGCAGAAAATAAAAAATGGCGAGATGATTAACGCCTGCAACCTCGATGGTCTCGAG
CTGCAAGGATACGACCTGTC

Product: pentapeptide repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 844; Mature: 844

Protein sequence:

>844_residues
MKIIKPLRLSVLNRPFRQQGKNYLGVSVMALLDMGTTPQLRPEVELWQLAAEELQTSGGVIDVAIPKVRAEFLATGNAYT
RHQKEKNSCAVRIDVGSLSKTLVAFGDRFWSGSQPTPPRNFESMRLDWSRAFGGAGYEENPHGIGAVEEQHNGAAFRRLP
NIEPLHQRMTSPRQQPEPVSFGPLDMTWPRRFKRMGKAYDANWLKNDFPGLARDADWRVFNAASPDQWWPEQDELPPEAE
WRIWNMHPEKPLQSGKLPPWRARCFINRQRGDETLFEEIRLRATTVWFFPHRQQMMLIWQGSGRINEDDAADVLQLMPAL
EKNGAARSANHYRKVLAQRLDKGKGALFAFREKDLLPEELIGPWIDSEMQQTESPMQNNMQNRVSKIREQHRARLEAEGR
DVNELLADMSQPEMPRLDELPEFVERLERQAEEMKAQAEARQAEVEARQGAKQDSRPRGPESMHRMQEMLHQHADSMTAK
KLAQSRESLHQMYLMAAQHQPPAQRMTGDIARIIRQRASNTMACGGDFSELDFTGANLSGMDFRGANFRKALLESADLSG
CQLDGADFSEAMLARTDLRNSSLRECNLTKASLALAQCRQTDFSGANLTETQLEDALFEDCDFSRATLKTLLLRQVGISH
CRFHRAELEECIVMNLTLPQLDFSEARLRKTVFQQCELQAAVFNGAWLESCNWVESKLPYAQFKAASLLTCAAVMESDLS
GADFSEATLKESNLRQALLTQANFTLAKVENSDLSEADCQRANFTRANLVGSLLIRTDFRQVNFTGANLMGALMQKTQLG
GADFTAANLFRADLSQSFINMETRLDNAYTSRVKTLPKRDEELS

Sequences:

>Translated_844_residues
MKIIKPLRLSVLNRPFRQQGKNYLGVSVMALLDMGTTPQLRPEVELWQLAAEELQTSGGVIDVAIPKVRAEFLATGNAYT
RHQKEKNSCAVRIDVGSLSKTLVAFGDRFWSGSQPTPPRNFESMRLDWSRAFGGAGYEENPHGIGAVEEQHNGAAFRRLP
NIEPLHQRMTSPRQQPEPVSFGPLDMTWPRRFKRMGKAYDANWLKNDFPGLARDADWRVFNAASPDQWWPEQDELPPEAE
WRIWNMHPEKPLQSGKLPPWRARCFINRQRGDETLFEEIRLRATTVWFFPHRQQMMLIWQGSGRINEDDAADVLQLMPAL
EKNGAARSANHYRKVLAQRLDKGKGALFAFREKDLLPEELIGPWIDSEMQQTESPMQNNMQNRVSKIREQHRARLEAEGR
DVNELLADMSQPEMPRLDELPEFVERLERQAEEMKAQAEARQAEVEARQGAKQDSRPRGPESMHRMQEMLHQHADSMTAK
KLAQSRESLHQMYLMAAQHQPPAQRMTGDIARIIRQRASNTMACGGDFSELDFTGANLSGMDFRGANFRKALLESADLSG
CQLDGADFSEAMLARTDLRNSSLRECNLTKASLALAQCRQTDFSGANLTETQLEDALFEDCDFSRATLKTLLLRQVGISH
CRFHRAELEECIVMNLTLPQLDFSEARLRKTVFQQCELQAAVFNGAWLESCNWVESKLPYAQFKAASLLTCAAVMESDLS
GADFSEATLKESNLRQALLTQANFTLAKVENSDLSEADCQRANFTRANLVGSLLIRTDFRQVNFTGANLMGALMQKTQLG
GADFTAANLFRADLSQSFINMETRLDNAYTSRVKTLPKRDEELS
>Mature_844_residues
MKIIKPLRLSVLNRPFRQQGKNYLGVSVMALLDMGTTPQLRPEVELWQLAAEELQTSGGVIDVAIPKVRAEFLATGNAYT
RHQKEKNSCAVRIDVGSLSKTLVAFGDRFWSGSQPTPPRNFESMRLDWSRAFGGAGYEENPHGIGAVEEQHNGAAFRRLP
NIEPLHQRMTSPRQQPEPVSFGPLDMTWPRRFKRMGKAYDANWLKNDFPGLARDADWRVFNAASPDQWWPEQDELPPEAE
WRIWNMHPEKPLQSGKLPPWRARCFINRQRGDETLFEEIRLRATTVWFFPHRQQMMLIWQGSGRINEDDAADVLQLMPAL
EKNGAARSANHYRKVLAQRLDKGKGALFAFREKDLLPEELIGPWIDSEMQQTESPMQNNMQNRVSKIREQHRARLEAEGR
DVNELLADMSQPEMPRLDELPEFVERLERQAEEMKAQAEARQAEVEARQGAKQDSRPRGPESMHRMQEMLHQHADSMTAK
KLAQSRESLHQMYLMAAQHQPPAQRMTGDIARIIRQRASNTMACGGDFSELDFTGANLSGMDFRGANFRKALLESADLSG
CQLDGADFSEAMLARTDLRNSSLRECNLTKASLALAQCRQTDFSGANLTETQLEDALFEDCDFSRATLKTLLLRQVGISH
CRFHRAELEECIVMNLTLPQLDFSEARLRKTVFQQCELQAAVFNGAWLESCNWVESKLPYAQFKAASLLTCAAVMESDLS
GADFSEATLKESNLRQALLTQANFTLAKVENSDLSEADCQRANFTRANLVGSLLIRTDFRQVNFTGANLMGALMQKTQLG
GADFTAANLFRADLSQSFINMETRLDNAYTSRVKTLPKRDEELS

Specific function: Unknown

COG id: COG1357

COG function: function code S; Uncharacterized low-complexity proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 7 pentapeptide repeat domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001646 [H]

Pfam domain/function: PF00805 Pentapeptide [H]

EC number: NA

Molecular weight: Translated: 95651; Mature: 95651

Theoretical pI: Translated: 6.47; Mature: 6.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIIKPLRLSVLNRPFRQQGKNYLGVSVMALLDMGTTPQLRPEVELWQLAAEELQTSGGV
CCCCHHHHHHHHCCCHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCE
IDVAIPKVRAEFLATGNAYTRHQKEKNSCAVRIDVGSLSKTLVAFGDRFWSGSQPTPPRN
EEEECHHHHHHHHHCCCHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCC
FESMRLDWSRAFGGAGYEENPHGIGAVEEQHNGAAFRRLPNIEPLHQRMTSPRQQPEPVS
CHHHHEEHHHHCCCCCCCCCCCCCCCCHHCCCCHHHHHCCCCCHHHHHHCCCCCCCCCCC
FGPLDMTWPRRFKRMGKAYDANWLKNDFPGLARDADWRVFNAASPDQWWPEQDELPPEAE
CCCCCCCHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCC
WRIWNMHPEKPLQSGKLPPWRARCFINRQRGDETLFEEIRLRATTVWFFPHRQQMMLIWQ
EEEECCCCCCCHHCCCCCCCHHHHEEECCCCHHHHHHHHHHHHEEEEEECCCCEEEEEEC
GSGRINEDDAADVLQLMPALEKNGAARSANHYRKVLAQRLDKGKGALFAFREKDLLPEEL
CCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHH
IGPWIDSEMQQTESPMQNNMQNRVSKIREQHRARLEAEGRDVNELLADMSQPEMPRLDEL
HCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCHHHH
PEFVERLERQAEEMKAQAEARQAEVEARQGAKQDSRPRGPESMHRMQEMLHQHADSMTAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
KLAQSRESLHQMYLMAAQHQPPAQRMTGDIARIIRQRASNTMACGGDFSELDFTGANLSG
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCC
MDFRGANFRKALLESADLSGCQLDGADFSEAMLARTDLRNSSLRECNLTKASLALAQCRQ
CCCCCCHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHCCCCCCHHCCCHHHHHHHHHHHH
TDFSGANLTETQLEDALFEDCDFSRATLKTLLLRQVGISHCRFHRAELEECIVMNLTLPQ
CCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCC
LDFSEARLRKTVFQQCELQAAVFNGAWLESCNWVESKLPYAQFKAASLLTCAAVMESDLS
CCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHCCCC
GADFSEATLKESNLRQALLTQANFTLAKVENSDLSEADCQRANFTRANLVGSLLIRTDFR
CCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCCHHHHHHHHHHHHHCCH
QVNFTGANLMGALMQKTQLGGADFTAANLFRADLSQSFINMETRLDNAYTSRVKTLPKRD
HEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
EELS
CCCC
>Mature Secondary Structure
MKIIKPLRLSVLNRPFRQQGKNYLGVSVMALLDMGTTPQLRPEVELWQLAAEELQTSGGV
CCCCHHHHHHHHCCCHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCE
IDVAIPKVRAEFLATGNAYTRHQKEKNSCAVRIDVGSLSKTLVAFGDRFWSGSQPTPPRN
EEEECHHHHHHHHHCCCHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCC
FESMRLDWSRAFGGAGYEENPHGIGAVEEQHNGAAFRRLPNIEPLHQRMTSPRQQPEPVS
CHHHHEEHHHHCCCCCCCCCCCCCCCCHHCCCCHHHHHCCCCCHHHHHHCCCCCCCCCCC
FGPLDMTWPRRFKRMGKAYDANWLKNDFPGLARDADWRVFNAASPDQWWPEQDELPPEAE
CCCCCCCHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCC
WRIWNMHPEKPLQSGKLPPWRARCFINRQRGDETLFEEIRLRATTVWFFPHRQQMMLIWQ
EEEECCCCCCCHHCCCCCCCHHHHEEECCCCHHHHHHHHHHHHEEEEEECCCCEEEEEEC
GSGRINEDDAADVLQLMPALEKNGAARSANHYRKVLAQRLDKGKGALFAFREKDLLPEEL
CCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHH
IGPWIDSEMQQTESPMQNNMQNRVSKIREQHRARLEAEGRDVNELLADMSQPEMPRLDEL
HCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCHHHH
PEFVERLERQAEEMKAQAEARQAEVEARQGAKQDSRPRGPESMHRMQEMLHQHADSMTAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
KLAQSRESLHQMYLMAAQHQPPAQRMTGDIARIIRQRASNTMACGGDFSELDFTGANLSG
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCC
MDFRGANFRKALLESADLSGCQLDGADFSEAMLARTDLRNSSLRECNLTKASLALAQCRQ
CCCCCCHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHCCCCCCHHCCCHHHHHHHHHHHH
TDFSGANLTETQLEDALFEDCDFSRATLKTLLLRQVGISHCRFHRAELEECIVMNLTLPQ
CCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCC
LDFSEARLRKTVFQQCELQAAVFNGAWLESCNWVESKLPYAQFKAASLLTCAAVMESDLS
CCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHCCCC
GADFSEATLKESNLRQALLTQANFTLAKVENSDLSEADCQRANFTRANLVGSLLIRTDFR
CCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCCHHHHHHHHHHHHHCCH
QVNFTGANLMGALMQKTQLGGADFTAANLFRADLSQSFINMETRLDNAYTSRVKTLPKRD
HEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
EELS
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]