| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157372412
Identifier: 157372412
GI number: 157372412
Start: 4632461
End: 4634575
Strand: Reverse
Name: 157372412
Synonym: Spro_4179
Alternate gene names: NA
Gene position: 4634575-4632461 (Counterclockwise)
Preceding gene: 157372413
Following gene: 157372411
Centisome position: 85.06
GC content: 57.78
Gene sequence:
>2115_bases ATGAGTAATCGCCACGTGATGGAAGCATTGCTGCGTCCAGCAGTCGAGTTGAATACAGCGATTGTGGCCGGTGCCGCAGC CGCTATTTGTTTTGTTGCCCCTTGGTCAGTGGCCTTGGCACCGTCGGTGAGTTATGTCACTGCCAGCGGGTTTGCGGTGT TATCTGCTATACGAGCCCGTCAGGGCATGCAGGTGATCCGCTATCGCCGTAATCTGCGCCGGCTGCCGCGCTACGTCATG ACCAGCGCACAGATCCCGGTTAGCCGGCAGCGGTTGTTCCTGGGGCGGGGTTTTCGCTGGCAGCAAAAGCACACCCAGCG CCTGATGGATACCCGTCGTCCAGAGGTTGAGAAGTATGTTCAGCCGCCAAAAATGTATCAGATGGCGCGTCGCCTGGAGC TTAAAACCGAATACACCCTGCCGTGGTTATCCCAGTTGCTGCGCACCGACTCCCTGCTGAATCCGGTCAGGCCGTTGCCG CCGGTCGGTGGGAACCCGGCGATTCATGGTATTGAACCCGATGAACTGGATGTTTCGATGGATTTGCGTGAACGCGTGGG CCACAGTCTGGTACTGGGTACTACGCGTGTTGGCAAAACGCGTCTCGCCGAGTTGCTGATCACCCAGGATATTCGGCGTG GTGACATCACCATCGTGTTTGATCCGAAAGGCGATGCAGACCTGCTGCGGCGTGTCTGGGCCGAAGCCCACCGTGCCGGC CGCGGGGATGAGCTGTTCATCTTTCATCTGGGTTGGCCAGATATCTCGGCACGCTATAACGCCGTCGGGCGTTTTGAGCG TGTGTCGGAAGTGGCCGGGCGTATCTCCGGGCAGTTGAGTGGGGAGGGCAACAGTGCGGCATTCCGCGAGTTTGCCTGGC GATTCGTCAACATCGTCGCGCGTGCCCTGGTTGCGTTGGGGCAGCGCCCGGACTACACCCTGATCACCCGGTATGTGAAC AACATCAGTGAACTGTATGAGACCTACGCGAAGAAGGTGATTGAAACGCGTATGCCGGCACTGCAGCAGCAAATCGACAA TAACCTGCAGGTGCTGACGGAAGAGGATGTGCCGCGCAATATGCAGGGACAACCGAACGCGGTCAAAATATTTGCAGTCG AAATGGCCCTGAGCTCGGAAGCCGGCAAGCAGCTGTATGATCCTATCCTGGATGGACTGCGCTCGGCCGTGCGCTATGAC CGCACCTATTTTGATAAAATTGTGGCGTCACTGCTGCCGTTGCTGGAAAAACTCACCACCGGCAAGACCGCAGAGCTGCT GGCGCCGAACTACATGGACATGAATGACCCCCGGCCGATATTTGACTGGGAACAGGTCATCCGCAAGCGCGGTATTGTTT ACGTCGGGCTGGATGCGTTGTCGGACGGAGTGGTTGCCTCTGCCGTCGGCAACAGTATGTTTGCTGACCTGGTGTCTGTG GCCGGCCATATCTATAAACACGGCATGCATGGCGGGTTGCCGACCCGCGCAGACGGCAAACTGCCGATCAACCTGCACTG TGACGAGTTCAATGAGTTGATGGGGGACGAATTTATCCCTCTCATCAACAAAGGCGGTGGCGCCGGCATGCAGGTGACGG CTTACACGCAAACCGAGTCGGACATTGAGGCGCGCATCGGCAGTACCGCCAAGGCGGCCCAGGTGACGGGTAACTTCAAT ACTCTGATCATGCTGCGCGTGCGAGAGAACCGAACCGCACAGCTACTGACGACACAGCTCCCGGAGGTCGATGTCTACAC CAAAACCCTGGTGTCGGGGCACGCTGATACGGCCGACATCGAGAAAGGGCAGGACTTCACGTCCAGTACTCAGGATCGCG TCGGTACGGTAAAAACGCCGCTGTTGATGCCGGCGGATGTGATTAATCTGCCGAAGGGGCAGGCGTTCGCGCTGCTGGAA GGTGGGCAATTATGGAAAATCAGGATGCCTTTACCGAGTGGCGACGGCGATGATGCGTTGATGCCACCCAACCTGCAGAA GATTGCCGAGGAGATGCAACGCAATTACCGGACCAGTGAATCCTGGTGGTCAGCCAGCACAGTCATGCCAGATGCGGTCA TAAAAGGGGGGCTGAATGTCACAAACGGTGAATAA
Upstream 100 bases:
>100_bases TGCTGCAAAACCATCCCCACGTTCACCTGGTCAGTGGTCAGCACCTGCTGGATTTATTGGCCGGTAAACCCTGCTGGAAC GAAAAAGGAATCAATCGATC
Downstream 100 bases:
>100_bases TCAGCCTCAGCAGCCCGTACAACCCCGCAAACATGGACTGCTATACAACGTGCTGTGGGGCTGGCCATGGATGCTGATCG GGATGTTTTTTGCCTCGTTG
Product: putative plasmid transfer protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 704; Mature: 703
Protein sequence:
>704_residues MSNRHVMEALLRPAVELNTAIVAGAAAAICFVAPWSVALAPSVSYVTASGFAVLSAIRARQGMQVIRYRRNLRRLPRYVM TSAQIPVSRQRLFLGRGFRWQQKHTQRLMDTRRPEVEKYVQPPKMYQMARRLELKTEYTLPWLSQLLRTDSLLNPVRPLP PVGGNPAIHGIEPDELDVSMDLRERVGHSLVLGTTRVGKTRLAELLITQDIRRGDITIVFDPKGDADLLRRVWAEAHRAG RGDELFIFHLGWPDISARYNAVGRFERVSEVAGRISGQLSGEGNSAAFREFAWRFVNIVARALVALGQRPDYTLITRYVN NISELYETYAKKVIETRMPALQQQIDNNLQVLTEEDVPRNMQGQPNAVKIFAVEMALSSEAGKQLYDPILDGLRSAVRYD RTYFDKIVASLLPLLEKLTTGKTAELLAPNYMDMNDPRPIFDWEQVIRKRGIVYVGLDALSDGVVASAVGNSMFADLVSV AGHIYKHGMHGGLPTRADGKLPINLHCDEFNELMGDEFIPLINKGGGAGMQVTAYTQTESDIEARIGSTAKAAQVTGNFN TLIMLRVRENRTAQLLTTQLPEVDVYTKTLVSGHADTADIEKGQDFTSSTQDRVGTVKTPLLMPADVINLPKGQAFALLE GGQLWKIRMPLPSGDGDDALMPPNLQKIAEEMQRNYRTSESWWSASTVMPDAVIKGGLNVTNGE
Sequences:
>Translated_704_residues MSNRHVMEALLRPAVELNTAIVAGAAAAICFVAPWSVALAPSVSYVTASGFAVLSAIRARQGMQVIRYRRNLRRLPRYVM TSAQIPVSRQRLFLGRGFRWQQKHTQRLMDTRRPEVEKYVQPPKMYQMARRLELKTEYTLPWLSQLLRTDSLLNPVRPLP PVGGNPAIHGIEPDELDVSMDLRERVGHSLVLGTTRVGKTRLAELLITQDIRRGDITIVFDPKGDADLLRRVWAEAHRAG RGDELFIFHLGWPDISARYNAVGRFERVSEVAGRISGQLSGEGNSAAFREFAWRFVNIVARALVALGQRPDYTLITRYVN NISELYETYAKKVIETRMPALQQQIDNNLQVLTEEDVPRNMQGQPNAVKIFAVEMALSSEAGKQLYDPILDGLRSAVRYD RTYFDKIVASLLPLLEKLTTGKTAELLAPNYMDMNDPRPIFDWEQVIRKRGIVYVGLDALSDGVVASAVGNSMFADLVSV AGHIYKHGMHGGLPTRADGKLPINLHCDEFNELMGDEFIPLINKGGGAGMQVTAYTQTESDIEARIGSTAKAAQVTGNFN TLIMLRVRENRTAQLLTTQLPEVDVYTKTLVSGHADTADIEKGQDFTSSTQDRVGTVKTPLLMPADVINLPKGQAFALLE GGQLWKIRMPLPSGDGDDALMPPNLQKIAEEMQRNYRTSESWWSASTVMPDAVIKGGLNVTNGE >Mature_703_residues SNRHVMEALLRPAVELNTAIVAGAAAAICFVAPWSVALAPSVSYVTASGFAVLSAIRARQGMQVIRYRRNLRRLPRYVMT SAQIPVSRQRLFLGRGFRWQQKHTQRLMDTRRPEVEKYVQPPKMYQMARRLELKTEYTLPWLSQLLRTDSLLNPVRPLPP VGGNPAIHGIEPDELDVSMDLRERVGHSLVLGTTRVGKTRLAELLITQDIRRGDITIVFDPKGDADLLRRVWAEAHRAGR GDELFIFHLGWPDISARYNAVGRFERVSEVAGRISGQLSGEGNSAAFREFAWRFVNIVARALVALGQRPDYTLITRYVNN ISELYETYAKKVIETRMPALQQQIDNNLQVLTEEDVPRNMQGQPNAVKIFAVEMALSSEAGKQLYDPILDGLRSAVRYDR TYFDKIVASLLPLLEKLTTGKTAELLAPNYMDMNDPRPIFDWEQVIRKRGIVYVGLDALSDGVVASAVGNSMFADLVSVA GHIYKHGMHGGLPTRADGKLPINLHCDEFNELMGDEFIPLINKGGGAGMQVTAYTQTESDIEARIGSTAKAAQVTGNFNT LIMLRVRENRTAQLLTTQLPEVDVYTKTLVSGHADTADIEKGQDFTSSTQDRVGTVKTPLLMPADVINLPKGQAFALLEG GQLWKIRMPLPSGDGDDALMPPNLQKIAEEMQRNYRTSESWWSASTVMPDAVIKGGLNVTNGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 78291; Mature: 78160
Theoretical pI: Translated: 8.99; Mature: 8.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNRHVMEALLRPAVELNTAIVAGAAAAICFVAPWSVALAPSVSYVTASGFAVLSAIRAR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHH QGMQVIRYRRNLRRLPRYVMTSAQIPVSRQRLFLGRGFRWQQKHTQRLMDTRRPEVEKYV HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHC QPPKMYQMARRLELKTEYTLPWLSQLLRTDSLLNPVRPLPPVGGNPAIHGIEPDELDVSM CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC DLRERVGHSLVLGTTRVGKTRLAELLITQDIRRGDITIVFDPKGDADLLRRVWAEAHRAG HHHHHCCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHCC RGDELFIFHLGWPDISARYNAVGRFERVSEVAGRISGQLSGEGNSAAFREFAWRFVNIVA CCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH RALVALGQRPDYTLITRYVNNISELYETYAKKVIETRMPALQQQIDNNLQVLTEEDVPRN HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCC MQGQPNAVKIFAVEMALSSEAGKQLYDPILDGLRSAVRYDRTYFDKIVASLLPLLEKLTT CCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GKTAELLAPNYMDMNDPRPIFDWEQVIRKRGIVYVGLDALSDGVVASAVGNSMFADLVSV CCCHHHCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEHHHHCCCHHHHHHHHHHHHHHHHH AGHIYKHGMHGGLPTRADGKLPINLHCDEFNELMGDEFIPLINKGGGAGMQVTAYTQTES HHHHHHHCCCCCCCCCCCCCCEEEEEHHHHHHHCCCCCCHHEECCCCCCEEEEEEECCCH DIEARIGSTAKAAQVTGNFNTLIMLRVRENRTAQLLTTQLPEVDVYTKTLVSGHADTADI HHHHHCCCCHHHHEECCCCCEEEEEEECCCCCHHHHHHCCCCCHHHHHHHHCCCCCCCCC EKGQDFTSSTQDRVGTVKTPLLMPADVINLPKGQAFALLEGGQLWKIRMPLPSGDGDDAL CCCCCCCCCHHHHCCCCCCCCCCCHHHHCCCCCCEEEEEECCCEEEEEECCCCCCCCCCC MPPNLQKIAEEMQRNYRTSESWWSASTVMPDAVIKGGLNVTNGE CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCC >Mature Secondary Structure SNRHVMEALLRPAVELNTAIVAGAAAAICFVAPWSVALAPSVSYVTASGFAVLSAIRAR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHH QGMQVIRYRRNLRRLPRYVMTSAQIPVSRQRLFLGRGFRWQQKHTQRLMDTRRPEVEKYV HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHC QPPKMYQMARRLELKTEYTLPWLSQLLRTDSLLNPVRPLPPVGGNPAIHGIEPDELDVSM CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC DLRERVGHSLVLGTTRVGKTRLAELLITQDIRRGDITIVFDPKGDADLLRRVWAEAHRAG HHHHHCCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHCC RGDELFIFHLGWPDISARYNAVGRFERVSEVAGRISGQLSGEGNSAAFREFAWRFVNIVA CCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH RALVALGQRPDYTLITRYVNNISELYETYAKKVIETRMPALQQQIDNNLQVLTEEDVPRN HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCC MQGQPNAVKIFAVEMALSSEAGKQLYDPILDGLRSAVRYDRTYFDKIVASLLPLLEKLTT CCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GKTAELLAPNYMDMNDPRPIFDWEQVIRKRGIVYVGLDALSDGVVASAVGNSMFADLVSV CCCHHHCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEHHHHCCCHHHHHHHHHHHHHHHHH AGHIYKHGMHGGLPTRADGKLPINLHCDEFNELMGDEFIPLINKGGGAGMQVTAYTQTES HHHHHHHCCCCCCCCCCCCCCEEEEEHHHHHHHCCCCCCHHEECCCCCCEEEEEEECCCH DIEARIGSTAKAAQVTGNFNTLIMLRVRENRTAQLLTTQLPEVDVYTKTLVSGHADTADI HHHHHCCCCHHHHEECCCCCEEEEEEECCCCCHHHHHHCCCCCHHHHHHHHCCCCCCCCC EKGQDFTSSTQDRVGTVKTPLLMPADVINLPKGQAFALLEGGQLWKIRMPLPSGDGDDAL CCCCCCCCCHHHHCCCCCCCCCCCHHHHCCCCCCEEEEEECCCEEEEEECCCCCCCCCCC MPPNLQKIAEEMQRNYRTSESWWSASTVMPDAVIKGGLNVTNGE CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA