| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157372413
Identifier: 157372413
GI number: 157372413
Start: 4634572
End: 4635162
Strand: Reverse
Name: 157372413
Synonym: Spro_4180
Alternate gene names: NA
Gene position: 4635162-4634572 (Counterclockwise)
Preceding gene: 157372414
Following gene: 157372412
Centisome position: 85.07
GC content: 54.99
Gene sequence:
>591_bases ATGATGTCCCCGCAGCATTTCGGTATCGCGCTGATGGCGAGTCCGATGCTGGTCGTCCTGTTGATAGGGCTGTTTATTGC GGTGATGGCCAGGTTGAATCTGCGTGGCCACGAGTCGGCCTCCGCACGGCGCCACCGCCGTTATCAGGCGATGGCCGCAC GGGTGCTTGAGCGATTACCACAATTGGCCGGTGACGCGCAGCGCCTGACTTACCTGCGCAAGATCAATCCCTACGTATTT GAAGAGCTGTTGTTGCTGGCCTGTGAACGCCAGGGACATCCGGTCAAACGTAACGCCTCATACAGCGGCGATGGCGGCCT AGACGGTCAGGTCATCATTGATGGCAAAAAATACTTTATACAGGCCAAACGCTATGGCCGAATCATCACTCCCTCACACA TCCAAAACTTTGGTGCGCTGCTGCTGAAATCTCGGTGCGAGGGTTTTTTTATTCATACCGGTCGTACTGGCCACCTCAGC CGGGCATTGCTGCAAAACCATCCCCACGTTCACCTGGTCAGTGGTCAGCACCTGCTGGATTTATTGGCCGGTAAACCCTG CTGGAACGAAAAAGGAATCAATCGATCATGA
Upstream 100 bases:
>100_bases CGATGGCGCCGGCCTCCGGCAGTGAACTGGCGCGCCGACTGCAGCTGTCTAACTACCCGGTACTCATCACCGACACCGGT TTGTCCCAGAAGGTCACGCC
Downstream 100 bases:
>100_bases GTAATCGCCACGTGATGGAAGCATTGCTGCGTCCAGCAGTCGAGTTGAATACAGCGATTGTGGCCGGTGCCGCAGCCGCT ATTTGTTTTGTTGCCCCTTG
Product: restriction endonuclease
Products: NA
Alternate protein names: Endonuclease
Number of amino acids: Translated: 196; Mature: 196
Protein sequence:
>196_residues MMSPQHFGIALMASPMLVVLLIGLFIAVMARLNLRGHESASARRHRRYQAMAARVLERLPQLAGDAQRLTYLRKINPYVF EELLLLACERQGHPVKRNASYSGDGGLDGQVIIDGKKYFIQAKRYGRIITPSHIQNFGALLLKSRCEGFFIHTGRTGHLS RALLQNHPHVHLVSGQHLLDLLAGKPCWNEKGINRS
Sequences:
>Translated_196_residues MMSPQHFGIALMASPMLVVLLIGLFIAVMARLNLRGHESASARRHRRYQAMAARVLERLPQLAGDAQRLTYLRKINPYVF EELLLLACERQGHPVKRNASYSGDGGLDGQVIIDGKKYFIQAKRYGRIITPSHIQNFGALLLKSRCEGFFIHTGRTGHLS RALLQNHPHVHLVSGQHLLDLLAGKPCWNEKGINRS >Mature_196_residues MMSPQHFGIALMASPMLVVLLIGLFIAVMARLNLRGHESASARRHRRYQAMAARVLERLPQLAGDAQRLTYLRKINPYVF EELLLLACERQGHPVKRNASYSGDGGLDGQVIIDGKKYFIQAKRYGRIITPSHIQNFGALLLKSRCEGFFIHTGRTGHLS RALLQNHPHVHLVSGQHLLDLLAGKPCWNEKGINRS
Specific function: Unknown
COG id: COG1715
COG function: function code V; Restriction endonuclease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22008; Mature: 22008
Theoretical pI: Translated: 10.89; Mature: 10.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMSPQHFGIALMASPMLVVLLIGLFIAVMARLNLRGHESASARRHRRYQAMAARVLERLP CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH QLAGDAQRLTYLRKINPYVFEELLLLACERQGHPVKRNASYSGDGGLDGQVIIDGKKYFI HHCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCHHHEE QAKRYGRIITPSHIQNFGALLLKSRCEGFFIHTGRTGHLSRALLQNHPHVHLVSGQHLLD EHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCCCEEEECCHHHHH LLAGKPCWNEKGINRS HHCCCCCCCCCCCCCC >Mature Secondary Structure MMSPQHFGIALMASPMLVVLLIGLFIAVMARLNLRGHESASARRHRRYQAMAARVLERLP CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH QLAGDAQRLTYLRKINPYVFEELLLLACERQGHPVKRNASYSGDGGLDGQVIIDGKKYFI HHCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCHHHEE QAKRYGRIITPSHIQNFGALLLKSRCEGFFIHTGRTGHLSRALLQNHPHVHLVSGQHLLD EHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCCCEEEECCHHHHH LLAGKPCWNEKGINRS HHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA