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The map label for this gene is papH [H]

Identifier: 157372380

GI number: 157372380

Start: 4601235

End: 4601777

Strand: Reverse

Name: papH [H]

Synonym: Spro_4147

Alternate gene names: 157372380

Gene position: 4601777-4601235 (Counterclockwise)

Preceding gene: 157372381

Following gene: 157372379

Centisome position: 84.45

GC content: 52.67

Gene sequence:

>543_bases
ATGAAGCGATTAACCGGTTATGTGGCGTTTTCCCTATTGGCAGTGTTGCTGGTTCGTTTGCCGGCAGTGGCTGCATCAAC
CCCTGCAGGTTGGGGCAGAGTCAATATGGAAGGGGCTATTCTCGATACCGCCTGCGCAATAGAGGCTGGAAGCCGGGATC
AGAGCATAGAAATGTCTACACTGCCGCTCAGTCAGATTATTCGTGATGGGCAGGGGCTAACGAAACCCTTCACTATCCGT
TTGGTGAACTGTGTCTTATCCCGGGCAACGGCTGGCCTGCCGGACTGGCAGCGATTTCAGGTGACATTTGACGGAGATGG
TCGTAACGGACTGTTTCAGGTGCATGGTGAGGCGCGAGGTGTGGCGCTGCAAATCACCGATGCGCGGGGCAATATTGCTT
TACCGGGCAAGCCATTACCGATGAGTGACGTGAATCCTGGCAATATGGACCTTAATTATTTCCTGCGTCTGGTCGGCGAT
CAGAATGTATTGCGGGCAGGGGAATACTATTCTGCCGTACGTTTTAAGCTGGATTATTACTGA

Upstream 100 bases:

>100_bases
TGACTTACCCGTAAGTCGCGTCAACACCGGTTATGCAGCATGCGGGGTAACCCGCATGTTTTTTCCTTTGAAGGGCCGTG
TAATAGCATGGAGTGCATTA

Downstream 100 bases:

>100_bases
TAATAATAAAGGGGCAGTGGTTATGGCGTATTTATCTCCTGCGTCCAGGGTATTTCGTGCGCGCTTGCTGGGTATTTTCA
TTGTGGCTGCTTTAGGTGGA

Product: fimbrial protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MKRLTGYVAFSLLAVLLVRLPAVAASTPAGWGRVNMEGAILDTACAIEAGSRDQSIEMSTLPLSQIIRDGQGLTKPFTIR
LVNCVLSRATAGLPDWQRFQVTFDGDGRNGLFQVHGEARGVALQITDARGNIALPGKPLPMSDVNPGNMDLNYFLRLVGD
QNVLRAGEYYSAVRFKLDYY

Sequences:

>Translated_180_residues
MKRLTGYVAFSLLAVLLVRLPAVAASTPAGWGRVNMEGAILDTACAIEAGSRDQSIEMSTLPLSQIIRDGQGLTKPFTIR
LVNCVLSRATAGLPDWQRFQVTFDGDGRNGLFQVHGEARGVALQITDARGNIALPGKPLPMSDVNPGNMDLNYFLRLVGD
QNVLRAGEYYSAVRFKLDYY
>Mature_180_residues
MKRLTGYVAFSLLAVLLVRLPAVAASTPAGWGRVNMEGAILDTACAIEAGSRDQSIEMSTLPLSQIIRDGQGLTKPFTIR
LVNCVLSRATAGLPDWQRFQVTFDGDGRNGLFQVHGEARGVALQITDARGNIALPGKPLPMSDVNPGNMDLNYFLRLVGD
QNVLRAGEYYSAVRFKLDYY

Specific function: PapH seems to anchor the pilus to the bacterial cell. In addition the stoichiometric relationship between papH and papA determines the pilus length [H]

COG id: COG3539

COG function: function code NU; P pilus assembly protein, pilin FimA

Gene ontology:

Cell location: Secreted. Fimbrium [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779 [H]

Pfam domain/function: PF00419 Fimbrial [H]

EC number: NA

Molecular weight: Translated: 19605; Mature: 19605

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLTGYVAFSLLAVLLVRLPAVAASTPAGWGRVNMEGAILDTACAIEAGSRDQSIEMST
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCEEEEHEEEEECCCCCCCEEEEC
LPLSQIIRDGQGLTKPFTIRLVNCVLSRATAGLPDWQRFQVTFDGDGRNGLFQVHGEARG
CCHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEEECCCCE
VALQITDARGNIALPGKPLPMSDVNPGNMDLNYFLRLVGDQNVLRAGEYYSAVRFKLDYY
EEEEEECCCCCEECCCCCCCCCCCCCCCCCHHHHEEECCCCCCCCCCCCEEEEEEEEECC
>Mature Secondary Structure
MKRLTGYVAFSLLAVLLVRLPAVAASTPAGWGRVNMEGAILDTACAIEAGSRDQSIEMST
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCEEEEHEEEEECCCCCCCEEEEC
LPLSQIIRDGQGLTKPFTIRLVNCVLSRATAGLPDWQRFQVTFDGDGRNGLFQVHGEARG
CCHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEEECCCCE
VALQITDARGNIALPGKPLPMSDVNPGNMDLNYFLRLVGDQNVLRAGEYYSAVRFKLDYY
EEEEEECCCCCEECCCCCCCCCCCCCCCCCHHHHEEECCCCCCCCCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2882856; 1357526; 2897064 [H]