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The map label for this gene is yfcU [H]

Identifier: 157372379

GI number: 157372379

Start: 4598672

End: 4601212

Strand: Reverse

Name: yfcU [H]

Synonym: Spro_4146

Alternate gene names: 157372379

Gene position: 4601212-4598672 (Counterclockwise)

Preceding gene: 157372380

Following gene: 157372378

Centisome position: 84.44

GC content: 55.18

Gene sequence:

>2541_bases
ATGGCGTATTTATCTCCTGCGTCCAGGGTATTTCGTGCGCGCTTGCTGGGTATTTTCATTGTGGCTGCTTTAGGTGGAGA
GGTTATATTCGCTCAGGCTGGGGAAGAGGTTCAGTTCAATACCGATATTTTAGATTTAAAAGATCGGGAAAATATCGATT
TAAGCCAGTTTTCTCAGGGCGGGTTTATTATGCCCGGCACTTATCCGATGGTGGTGCGGATTAATGAGCAGGATTTACCG
GAGCAGCCGGTCGTGTTTCGAGCGCCGGATAGTGATCCCAAAGGTAGTTTGGTGTGCTTGTCTCCCGAACTGGTTGGTCA
ACTAGGGTTGAAGCCCGAAATGCTCGAAGGGCTGACCTGGTGGCACGATGGGCAGTGCCTTGATCTCAGCAGCTTGAAGG
GGATGGAAGCGCGAGGCAATCTGAGCAATGGGGTGTTGTATTTGAGCATCCCACAGGCTTATTTGGAATATACCTCCGAT
AACTGGGATCCCCCTTCGCGCTGGGATGATGGCATACCTGGTTTGTTGCTGGATTATAACATTAATGCGCAAACTCGGCG
GCAACAGTCTCATGGCGATAAAGGCTATAGCCTGAGCGGTAACGGCACTATGGGGGCCAACCTCGGTGCCTGGCGCTTGC
GTGCGGACTGGCAGACACGGCTTGAACATCAAACCGGCCAGGGGCAGAGCAACCAGCAAAACTGGGAGTGGAGCCGTTAT
TACGCCTACCGCGCTATCCGCAGTCTGGGGGCGCGCTTAACGCTGGGTGAAGACTATCTCACCTCCGAAGTATTCGACAG
CTTCCGCTTTAGCGGCCTGAGCCTGAACTCCGACGACAACATGTTACCGCCGAACCTGCGCGGCTACGCGCCGGAGGTCA
CCGGGATCGCCCGCAGTAACGCAAAAGTGACTATAAGCCAGCAGGGGCGCGTGTTGTACGAGACTCAGGTGGCCTCGGGG
CCTTTTCGGATCCAGGACATCAATAATGCGGTGAACGGCAAATTGGATGTTCGGGTAGAAGAGCAGGACGGCACAGTGCA
GGAATTCCAAATGGATACCGCCAGCGTGCCTTACCTGACGCGCCCGGGGCGGGTGCGCTACAAGCTGGCGAGCGGTAAAC
CTTCGGATTGGCAGCACCGAAGTGACGGCCCGTTGTTCGCTATGGGGGATTTCTCCTGGGGCATCAACAACGGCTGGTCA
CTGTATGGCGGTGGGCTGGCAGCCGGTGATTACAACGCGGCATCGATTGGCTTTGGGCGTGATTTGCTGGTGTTCGGGGC
GTTGGCGTTCGACGTTACCCAGTCTCGGGCAGTGCTGGATCGCTACGGCACGTTAAGCGGGCGTTCGTATCGACTCAGCT
ATTCCAAAACGTTCGACGAATACGACAGCCAGGTGACGTTCGCCGGGTACCGATTCTCTGAGCGCAACTTTATGCGTATG
GGGGAGTTTTTGGAGGCGCGGCGAGACAGTTCTTTGCTCAATCAAAGCAAAGAGATGTATACGGTCTCATTCAACAAGCA
ATTCCGTGATCTGGGGCTGAGCGCATATGTGGATTACCAACACCAGACCTATTGGGACCGCCCGGCCAACGATCGGTTAA
GCCTGTCGGTGTCGCGTTACTTTGATATTGGGGAATTCCGCAACCTTAGCCTGTCGCTCTCGGCCTATCGCAACACCTAC
AACGGAGTGAGCGACGACGGTATGTATCTCTCACTGTCGATGCCATTCGGTAACAACGGCTCAGTGAGTTACAACACCAC
GGTCAATCGTAATGATACCACGCACAGGGTGGGTTATTACGACCGGGTGGATGATCGCACCAACTATCAGCTCAATGCTG
GTACCGCCCGCAGTGGTGAGTCGTTGAGTGGTTACATCAGCCATCGTGGCGATGTGGCGCAGGTGAATGCCAACGCCAGC
TATCAGGCGGGGCAATATTCTTCGATGGGGCTTTCACTGCAAGGGGGCGCTACTGCGACGCTGGAAGGCGCTGCATTGCA
TCGCTCCGGCATGACGGGGGGCACGCGGCTGTTAATTGATACCGATGGTGCGCCAAACGTGCCGGTGCGTGGTTATGGTC
CAAGCGTGCGCTCTAATGCCTTCGGCAAAGTAGTGGTGGCAGATATCAGCAGTTACTACCGCAGCAAGGCGAGCATCGAT
CTGGATAAGCTGGATGAGAATACGGAGGCCACCAACTCGGTAACGCAGGCCACATTGACTGAAGGTGCTATTGGCTACCG
ACATTTTGAAGTGATCTCGGGAATGAAGGCAATGGCGGTTATCCGGTTGGCGGATGGCAGCACCCCGCCGTTTGGCGCCA
CGGTGCGAAACAGCAAAGATCAGGATACCGGCATCGTCAACGAAGACGGCAGCGTTTATCTGAGCGGTATCAAGGCCGGG
CAAATGATGTCGGTTAACTGGGATGGCCGCAGGCAATGTGAGATTTCTTTGCCGGAGACGCTGCCACAGAGTGACCAAAC
GAATTTATTGCTGCCGTGTAGTGCGGTGGCGACTACAGAGAAAACAGGTAACGAATCATGA

Upstream 100 bases:

>100_bases
CGTCTGGTCGGCGATCAGAATGTATTGCGGGCAGGGGAATACTATTCTGCCGTACGTTTTAAGCTGGATTATTACTGATA
ATAATAAAGGGGCAGTGGTT

Downstream 100 bases:

>100_bases
AAATGAACAAGATTTTGCCCCTTTCCGCGTTGTTGTTGTGCACGGGAATGACGGCTCAACAGGCAAACGCTGCGATTTCG
CTGGACCGCACCCGGATCGT

Product: fimbrial biogenesis outer membrane usher protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 846; Mature: 845

Protein sequence:

>846_residues
MAYLSPASRVFRARLLGIFIVAALGGEVIFAQAGEEVQFNTDILDLKDRENIDLSQFSQGGFIMPGTYPMVVRINEQDLP
EQPVVFRAPDSDPKGSLVCLSPELVGQLGLKPEMLEGLTWWHDGQCLDLSSLKGMEARGNLSNGVLYLSIPQAYLEYTSD
NWDPPSRWDDGIPGLLLDYNINAQTRRQQSHGDKGYSLSGNGTMGANLGAWRLRADWQTRLEHQTGQGQSNQQNWEWSRY
YAYRAIRSLGARLTLGEDYLTSEVFDSFRFSGLSLNSDDNMLPPNLRGYAPEVTGIARSNAKVTISQQGRVLYETQVASG
PFRIQDINNAVNGKLDVRVEEQDGTVQEFQMDTASVPYLTRPGRVRYKLASGKPSDWQHRSDGPLFAMGDFSWGINNGWS
LYGGGLAAGDYNAASIGFGRDLLVFGALAFDVTQSRAVLDRYGTLSGRSYRLSYSKTFDEYDSQVTFAGYRFSERNFMRM
GEFLEARRDSSLLNQSKEMYTVSFNKQFRDLGLSAYVDYQHQTYWDRPANDRLSLSVSRYFDIGEFRNLSLSLSAYRNTY
NGVSDDGMYLSLSMPFGNNGSVSYNTTVNRNDTTHRVGYYDRVDDRTNYQLNAGTARSGESLSGYISHRGDVAQVNANAS
YQAGQYSSMGLSLQGGATATLEGAALHRSGMTGGTRLLIDTDGAPNVPVRGYGPSVRSNAFGKVVVADISSYYRSKASID
LDKLDENTEATNSVTQATLTEGAIGYRHFEVISGMKAMAVIRLADGSTPPFGATVRNSKDQDTGIVNEDGSVYLSGIKAG
QMMSVNWDGRRQCEISLPETLPQSDQTNLLLPCSAVATTEKTGNES

Sequences:

>Translated_846_residues
MAYLSPASRVFRARLLGIFIVAALGGEVIFAQAGEEVQFNTDILDLKDRENIDLSQFSQGGFIMPGTYPMVVRINEQDLP
EQPVVFRAPDSDPKGSLVCLSPELVGQLGLKPEMLEGLTWWHDGQCLDLSSLKGMEARGNLSNGVLYLSIPQAYLEYTSD
NWDPPSRWDDGIPGLLLDYNINAQTRRQQSHGDKGYSLSGNGTMGANLGAWRLRADWQTRLEHQTGQGQSNQQNWEWSRY
YAYRAIRSLGARLTLGEDYLTSEVFDSFRFSGLSLNSDDNMLPPNLRGYAPEVTGIARSNAKVTISQQGRVLYETQVASG
PFRIQDINNAVNGKLDVRVEEQDGTVQEFQMDTASVPYLTRPGRVRYKLASGKPSDWQHRSDGPLFAMGDFSWGINNGWS
LYGGGLAAGDYNAASIGFGRDLLVFGALAFDVTQSRAVLDRYGTLSGRSYRLSYSKTFDEYDSQVTFAGYRFSERNFMRM
GEFLEARRDSSLLNQSKEMYTVSFNKQFRDLGLSAYVDYQHQTYWDRPANDRLSLSVSRYFDIGEFRNLSLSLSAYRNTY
NGVSDDGMYLSLSMPFGNNGSVSYNTTVNRNDTTHRVGYYDRVDDRTNYQLNAGTARSGESLSGYISHRGDVAQVNANAS
YQAGQYSSMGLSLQGGATATLEGAALHRSGMTGGTRLLIDTDGAPNVPVRGYGPSVRSNAFGKVVVADISSYYRSKASID
LDKLDENTEATNSVTQATLTEGAIGYRHFEVISGMKAMAVIRLADGSTPPFGATVRNSKDQDTGIVNEDGSVYLSGIKAG
QMMSVNWDGRRQCEISLPETLPQSDQTNLLLPCSAVATTEKTGNES
>Mature_845_residues
AYLSPASRVFRARLLGIFIVAALGGEVIFAQAGEEVQFNTDILDLKDRENIDLSQFSQGGFIMPGTYPMVVRINEQDLPE
QPVVFRAPDSDPKGSLVCLSPELVGQLGLKPEMLEGLTWWHDGQCLDLSSLKGMEARGNLSNGVLYLSIPQAYLEYTSDN
WDPPSRWDDGIPGLLLDYNINAQTRRQQSHGDKGYSLSGNGTMGANLGAWRLRADWQTRLEHQTGQGQSNQQNWEWSRYY
AYRAIRSLGARLTLGEDYLTSEVFDSFRFSGLSLNSDDNMLPPNLRGYAPEVTGIARSNAKVTISQQGRVLYETQVASGP
FRIQDINNAVNGKLDVRVEEQDGTVQEFQMDTASVPYLTRPGRVRYKLASGKPSDWQHRSDGPLFAMGDFSWGINNGWSL
YGGGLAAGDYNAASIGFGRDLLVFGALAFDVTQSRAVLDRYGTLSGRSYRLSYSKTFDEYDSQVTFAGYRFSERNFMRMG
EFLEARRDSSLLNQSKEMYTVSFNKQFRDLGLSAYVDYQHQTYWDRPANDRLSLSVSRYFDIGEFRNLSLSLSAYRNTYN
GVSDDGMYLSLSMPFGNNGSVSYNTTVNRNDTTHRVGYYDRVDDRTNYQLNAGTARSGESLSGYISHRGDVAQVNANASY
QAGQYSSMGLSLQGGATATLEGAALHRSGMTGGTRLLIDTDGAPNVPVRGYGPSVRSNAFGKVVVADISSYYRSKASIDL
DKLDENTEATNSVTQATLTEGAIGYRHFEVISGMKAMAVIRLADGSTPPFGATVRNSKDQDTGIVNEDGSVYLSGIKAGQ
MMSVNWDGRRQCEISLPETLPQSDQTNLLLPCSAVATTEKTGNES

Specific function: Involved in the export and assembly of a fimbrial subunit across the outer membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial export usher family [H]

Homologues:

Organism=Escherichia coli, GI87081778, Length=826, Percent_Identity=37.409200968523, Blast_Score=523, Evalue=1e-149,
Organism=Escherichia coli, GI1790772, Length=872, Percent_Identity=29.0137614678899, Blast_Score=320, Evalue=2e-88,
Organism=Escherichia coli, GI1787172, Length=837, Percent_Identity=29.5101553166069, Blast_Score=298, Evalue=8e-82,
Organism=Escherichia coli, GI1789533, Length=838, Percent_Identity=29.1169451073986, Blast_Score=286, Evalue=5e-78,
Organism=Escherichia coli, GI1786332, Length=833, Percent_Identity=29.0516206482593, Blast_Score=277, Evalue=2e-75,
Organism=Escherichia coli, GI1786744, Length=860, Percent_Identity=27.6744186046512, Blast_Score=265, Evalue=6e-72,
Organism=Escherichia coli, GI1788427, Length=862, Percent_Identity=25.9860788863109, Blast_Score=209, Evalue=5e-55,
Organism=Escherichia coli, GI1789610, Length=793, Percent_Identity=25.4728877679697, Blast_Score=127, Evalue=4e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000015
- InterPro:   IPR018030 [H]

Pfam domain/function: PF00577 Usher [H]

EC number: NA

Molecular weight: Translated: 93308; Mature: 93176

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: PS01151 FIMBRIAL_USHER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYLSPASRVFRARLLGIFIVAALGGEVIFAQAGEEVQFNTDILDLKDRENIDLSQFSQG
CCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEECCCEEECCCCCCCCHHHHCCC
GFIMPGTYPMVVRINEQDLPEQPVVFRAPDSDPKGSLVCLSPELVGQLGLKPEMLEGLTW
CEECCCCCEEEEEECCCCCCCCCEEEECCCCCCCCCEEEECHHHHHHCCCCHHHHCCCCE
WHDGQCLDLSSLKGMEARGNLSNGVLYLSIPQAYLEYTSDNWDPPSRWDDGIPGLLLDYN
ECCCCEEEHHHCCCCCCCCCCCCCEEEEEECHHHHHHCCCCCCCCCCCCCCCCCEEEEEC
INAQTRRQQSHGDKGYSLSGNGTMGANLGAWRLRADWQTRLEHQTGQGQSNQQNWEWSRY
CCHHHHHHHHCCCCCEEECCCCCCCCCCCEEEEECCHHHHHHHCCCCCCCCCCCCCHHHH
YAYRAIRSLGARLTLGEDYLTSEVFDSFRFSGLSLNSDDNMLPPNLRGYAPEVTGIARSN
HHHHHHHHCCCEEEECCHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCEEECCC
AKVTISQQGRVLYETQVASGPFRIQDINNAVNGKLDVRVEEQDGTVQEFQMDTASVPYLT
CEEEEECCCCEEEEEEECCCCEEEEECCCCCCCEEEEEEECCCCCCEEEECCCCCCCEEE
RPGRVRYKLASGKPSDWQHRSDGPLFAMGDFSWGINNGWSLYGGGLAAGDYNAASIGFGR
CCCCEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEECCEEECCCCCCEEECCCC
DLLVFGALAFDVTQSRAVLDRYGTLSGRSYRLSYSKTFDEYDSQVTFAGYRFSERNFMRM
HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHCCEEEEEEEEECCCHHHHH
GEFLEARRDSSLLNQSKEMYTVSFNKQFRDLGLSAYVDYQHQTYWDRPANDRLSLSVSRY
HHHHHHHHHHHHHCCCCEEEEEEECCHHHHCCCEEEEECCCCEECCCCCCCEEEEEEEHE
FDIGEFRNLSLSLSAYRNTYNGVSDDGMYLSLSMPFGNNGSVSYNTTVNRNDTTHRVGYY
ECCCCCCCEEEEEEEHHCCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCEEECCCE
DRVDDRTNYQLNAGTARSGESLSGYISHRGDVAQVNANASYQAGQYSSMGLSLQGGATAT
ECCCCCCCEEEECCCCCCCCCCEEHHHCCCCEEEEECCCCCCCCCCCCCCEEECCCCEEE
LEGAALHRSGMTGGTRLLIDTDGAPNVPVRGYGPSVRSNAFGKVVVADISSYYRSKASID
ECCCEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHCCCCCC
LDKLDENTEATNSVTQATLTEGAIGYRHFEVISGMKAMAVIRLADGSTPPFGATVRNSKD
HHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEEEEECCCCCCCCCEECCCCC
QDTGIVNEDGSVYLSGIKAGQMMSVNWDGRRQCEISLPETLPQSDQTNLLLPCSAVATTE
CCCCEECCCCCEEEEEECCCEEEEECCCCCEEEEEECCCCCCCCCCCCEEEECCCEEECC
KTGNES
CCCCCC
>Mature Secondary Structure 
AYLSPASRVFRARLLGIFIVAALGGEVIFAQAGEEVQFNTDILDLKDRENIDLSQFSQG
CCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEECCCEEECCCCCCCCHHHHCCC
GFIMPGTYPMVVRINEQDLPEQPVVFRAPDSDPKGSLVCLSPELVGQLGLKPEMLEGLTW
CEECCCCCEEEEEECCCCCCCCCEEEECCCCCCCCCEEEECHHHHHHCCCCHHHHCCCCE
WHDGQCLDLSSLKGMEARGNLSNGVLYLSIPQAYLEYTSDNWDPPSRWDDGIPGLLLDYN
ECCCCEEEHHHCCCCCCCCCCCCCEEEEEECHHHHHHCCCCCCCCCCCCCCCCCEEEEEC
INAQTRRQQSHGDKGYSLSGNGTMGANLGAWRLRADWQTRLEHQTGQGQSNQQNWEWSRY
CCHHHHHHHHCCCCCEEECCCCCCCCCCCEEEEECCHHHHHHHCCCCCCCCCCCCCHHHH
YAYRAIRSLGARLTLGEDYLTSEVFDSFRFSGLSLNSDDNMLPPNLRGYAPEVTGIARSN
HHHHHHHHCCCEEEECCHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCEEECCC
AKVTISQQGRVLYETQVASGPFRIQDINNAVNGKLDVRVEEQDGTVQEFQMDTASVPYLT
CEEEEECCCCEEEEEEECCCCEEEEECCCCCCCEEEEEEECCCCCCEEEECCCCCCCEEE
RPGRVRYKLASGKPSDWQHRSDGPLFAMGDFSWGINNGWSLYGGGLAAGDYNAASIGFGR
CCCCEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEECCEEECCCCCCEEECCCC
DLLVFGALAFDVTQSRAVLDRYGTLSGRSYRLSYSKTFDEYDSQVTFAGYRFSERNFMRM
HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHCCEEEEEEEEECCCHHHHH
GEFLEARRDSSLLNQSKEMYTVSFNKQFRDLGLSAYVDYQHQTYWDRPANDRLSLSVSRY
HHHHHHHHHHHHHCCCCEEEEEEECCHHHHCCCEEEEECCCCEECCCCCCCEEEEEEEHE
FDIGEFRNLSLSLSAYRNTYNGVSDDGMYLSLSMPFGNNGSVSYNTTVNRNDTTHRVGYY
ECCCCCCCEEEEEEEHHCCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCEEECCCE
DRVDDRTNYQLNAGTARSGESLSGYISHRGDVAQVNANASYQAGQYSSMGLSLQGGATAT
ECCCCCCCEEEECCCCCCCCCCEEHHHCCCCEEEEECCCCCCCCCCCCCCEEECCCCEEE
LEGAALHRSGMTGGTRLLIDTDGAPNVPVRGYGPSVRSNAFGKVVVADISSYYRSKASID
ECCCEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHCCCCCC
LDKLDENTEATNSVTQATLTEGAIGYRHFEVISGMKAMAVIRLADGSTPPFGATVRNSKD
HHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEEEEECCCCCCCCCEECCCCC
QDTGIVNEDGSVYLSGIKAGQMMSVNWDGRRQCEISLPETLPQSDQTNLLLPCSAVATTE
CCCCEECCCCCEEEEEECCCEEEEECCCCCEEEEEECCCCCCCCCCCCEEEECCCEEECC
KTGNES
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]