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The map label for this gene is yfcR [H]

Identifier: 157372375

GI number: 157372375

Start: 4596157

End: 4596669

Strand: Reverse

Name: yfcR [H]

Synonym: Spro_4142

Alternate gene names: 157372375

Gene position: 4596669-4596157 (Counterclockwise)

Preceding gene: 157372376

Following gene: 157372374

Centisome position: 84.36

GC content: 53.61

Gene sequence:

>513_bases
ATGAACGATAACCAGGTTGGCCTAAACAATGACCGGGCCAGGTATTGCGGCCTGTTGCTGCTATTTTCGTGCGGGCTGGT
GCAGGCTCAGGATCGAGTGAACTTTAACATTCAGGTGATAGAAGGCCCGCCGTGCAACATCAATAATGGCCAGGCTATTG
AAGTTAACTTTGGCGATGACCTGCTGATCACCCGGATCGACGGCGTGAATTACAGCAAGACCATCGATTACACCCTGGAC
TGCCGCGAAGCGGGCAATAATGCGATTCGGATGCAGATACAGGGGCTTGTAGCCTCTTTCGATGGCAATGTGCTGGCGAC
GGTAGAGCGGCCGGAACTTGGGGTCGCGATAAAACTCGCCAATGCCATGCCCATGCCGGTAAACGGCTGGTTAAACCTGG
CGAGTTCGTCGACAAAACCGGCACTAACAGCGGTTCCGGTAAAAGCACCGAACAGTGTGCTGCAGCCGGGGAGATTTTCC
GCCGGCGCCACCATGTTATTTGAATATCAATAA

Upstream 100 bases:

>100_bases
TTTCAGCGGTGCCGGTGAAAGCACCGGGAAGCAAGATTATAGGTGGGTACTTTGGCACTACGGCCATTATCGAGATTGAT
TACCAATAAGGGGCCGGGAG

Downstream 100 bases:

>100_bases
GGGGCAGATGATGCAGAATAAACACATTTTGCGGGCAGCCGCTGCCTGCTCGTTGGCGGTATTACTGGGCGGTTTACCCG
TGCGAGCGGAAGAGAACATG

Product: MrfE protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MNDNQVGLNNDRARYCGLLLLFSCGLVQAQDRVNFNIQVIEGPPCNINNGQAIEVNFGDDLLITRIDGVNYSKTIDYTLD
CREAGNNAIRMQIQGLVASFDGNVLATVERPELGVAIKLANAMPMPVNGWLNLASSSTKPALTAVPVKAPNSVLQPGRFS
AGATMLFEYQ

Sequences:

>Translated_170_residues
MNDNQVGLNNDRARYCGLLLLFSCGLVQAQDRVNFNIQVIEGPPCNINNGQAIEVNFGDDLLITRIDGVNYSKTIDYTLD
CREAGNNAIRMQIQGLVASFDGNVLATVERPELGVAIKLANAMPMPVNGWLNLASSSTKPALTAVPVKAPNSVLQPGRFS
AGATMLFEYQ
>Mature_170_residues
MNDNQVGLNNDRARYCGLLLLFSCGLVQAQDRVNFNIQVIEGPPCNINNGQAIEVNFGDDLLITRIDGVNYSKTIDYTLD
CREAGNNAIRMQIQGLVASFDGNVLATVERPELGVAIKLANAMPMPVNGWLNLASSSTKPALTAVPVKAPNSVLQPGRFS
AGATMLFEYQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788676, Length=161, Percent_Identity=31.055900621118, Blast_Score=70, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779 [H]

Pfam domain/function: PF00419 Fimbrial [H]

EC number: NA

Molecular weight: Translated: 18359; Mature: 18359

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDNQVGLNNDRARYCGLLLLFSCGLVQAQDRVNFNIQVIEGPPCNINNGQAIEVNFGDD
CCCCCCCCCCCHHHHHHHHHHHHCCCEEECCCCCEEEEEEECCCCCCCCCCEEEEECCCC
LLITRIDGVNYSKTIDYTLDCREAGNNAIRMQIQGLVASFDGNVLATVERPELGVAIKLA
EEEEEECCCCCCEEEEEEEEHHHCCCEEEEEEEEEEEEECCCCEEEEEECCCCCEEEEEC
NAMPMPVNGWLNLASSSTKPALTAVPVKAPNSVLQPGRFSAGATMLFEYQ
CCCCCCCCCEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEEC
>Mature Secondary Structure
MNDNQVGLNNDRARYCGLLLLFSCGLVQAQDRVNFNIQVIEGPPCNINNGQAIEVNFGDD
CCCCCCCCCCCHHHHHHHHHHHHCCCEEECCCCCEEEEEEECCCCCCCCCCEEEEECCCC
LLITRIDGVNYSKTIDYTLDCREAGNNAIRMQIQGLVASFDGNVLATVERPELGVAIKLA
EEEEEECCCCCCEEEEEEEEHHHCCCEEEEEEEEEEEEECCCCEEEEEECCCCCEEEEEC
NAMPMPVNGWLNLASSSTKPALTAVPVKAPNSVLQPGRFSAGATMLFEYQ
CCCCCCCCCEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]