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The map label for this gene is yfcR [H]

Identifier: 157372374

GI number: 157372374

Start: 4595646

End: 4596146

Strand: Reverse

Name: yfcR [H]

Synonym: Spro_4141

Alternate gene names: 157372374

Gene position: 4596146-4595646 (Counterclockwise)

Preceding gene: 157372375

Following gene: 157372373

Centisome position: 84.35

GC content: 53.09

Gene sequence:

>501_bases
ATGCAGAATAAACACATTTTGCGGGCAGCCGCTGCCTGCTCGTTGGCGGTATTACTGGGCGGTTTACCCGTGCGAGCGGA
AGAGAACATGCGTTTTCTGGGGACGTTGATCTCCCCGCCGCCCTGCATCATCAATGGCGGCCAGATGATCGAAGTGAATT
TTGGCGATGAGCTGGTGACTAGCCGCATAGATGGGGTTAATTACCGCAAGGACATCGACTACAGCCTGGATTGCCGTAAT
GCGGGTGCCAATTCTGTTCAGATGCAAATTCAAGGTAACGCCGCTACCTTTGATGGCTCCGTGCTGGCGACCGTTGAACG
CAGTGAGCTGGGTATTGCTTTGAAGACAGAGGCTGGCCCACCGATGAATATTAATACCTGGCATAAAATACAGTTCGGTG
CAACGCCAAAATTGGCTGCGGTGCCGGTGAAAGCGACGGGTAGCCAGTTGCAAGCAGGGAGCTTTACCGCTGGCGCTACG
ATGCTGATTGAATATCAATGA

Upstream 100 bases:

>100_bases
CTAACAGCGGTTCCGGTAAAAGCACCGAACAGTGTGCTGCAGCCGGGGAGATTTTCCGCCGGCGCCACCATGTTATTTGA
ATATCAATAAGGGGCAGATG

Downstream 100 bases:

>100_bases
GGGGCAAAAGGGTGAATGCTAAACAGGTTGGCAGAGCCGCTTTTTTTTATTTCCTGCTCGGGACGTTGGGTGATTTTTCT
GCAATGGCGGAAGATAACAT

Product: fimbrial protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MQNKHILRAAAACSLAVLLGGLPVRAEENMRFLGTLISPPPCIINGGQMIEVNFGDELVTSRIDGVNYRKDIDYSLDCRN
AGANSVQMQIQGNAATFDGSVLATVERSELGIALKTEAGPPMNINTWHKIQFGATPKLAAVPVKATGSQLQAGSFTAGAT
MLIEYQ

Sequences:

>Translated_166_residues
MQNKHILRAAAACSLAVLLGGLPVRAEENMRFLGTLISPPPCIINGGQMIEVNFGDELVTSRIDGVNYRKDIDYSLDCRN
AGANSVQMQIQGNAATFDGSVLATVERSELGIALKTEAGPPMNINTWHKIQFGATPKLAAVPVKATGSQLQAGSFTAGAT
MLIEYQ
>Mature_166_residues
MQNKHILRAAAACSLAVLLGGLPVRAEENMRFLGTLISPPPCIINGGQMIEVNFGDELVTSRIDGVNYRKDIDYSLDCRN
AGANSVQMQIQGNAATFDGSVLATVERSELGIALKTEAGPPMNINTWHKIQFGATPKLAAVPVKATGSQLQAGSFTAGAT
MLIEYQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788676, Length=163, Percent_Identity=38.0368098159509, Blast_Score=114, Evalue=5e-27,
Organism=Escherichia coli, GI1788675, Length=149, Percent_Identity=34.8993288590604, Blast_Score=82, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779 [H]

Pfam domain/function: PF00419 Fimbrial [H]

EC number: NA

Molecular weight: Translated: 17633; Mature: 17633

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNKHILRAAAACSLAVLLGGLPVRAEENMRFLGTLISPPPCIINGGQMIEVNFGDELVT
CCCCHHHHHHHHHHHHHHHCCCCEECCCCCEEEEEECCCCCEEEECCEEEEEECCCHHHH
SRIDGVNYRKDIDYSLDCRNAGANSVQMQIQGNAATFDGSVLATVERSELGIALKTEAGP
HHCCCCCCCCCCCEEEECCCCCCCEEEEEEECCEEEECCEEEEEEECCCCCEEEECCCCC
PMNINTWHKIQFGATPKLAAVPVKATGSQLQAGSFTAGATMLIEYQ
CCCCCCEEEEEECCCCCEEEEEEECCCCEEECCCCCCCEEEEEEEC
>Mature Secondary Structure
MQNKHILRAAAACSLAVLLGGLPVRAEENMRFLGTLISPPPCIINGGQMIEVNFGDELVT
CCCCHHHHHHHHHHHHHHHCCCCEECCCCCEEEEEECCCCCEEEECCEEEEEECCCHHHH
SRIDGVNYRKDIDYSLDCRNAGANSVQMQIQGNAATFDGSVLATVERSELGIALKTEAGP
HHCCCCCCCCCCCEEEECCCCCCCEEEEEEECCEEEECCEEEEEEECCCCCEEEECCCCC
PMNINTWHKIQFGATPKLAAVPVKATGSQLQAGSFTAGATMLIEYQ
CCCCCCEEEEEECCCCCEEEEEEECCCCEEECCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]