| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157372353
Identifier: 157372353
GI number: 157372353
Start: 4575504
End: 4576154
Strand: Reverse
Name: 157372353
Synonym: Spro_4119
Alternate gene names: NA
Gene position: 4576154-4575504 (Counterclockwise)
Preceding gene: 157372355
Following gene: 157372352
Centisome position: 83.98
GC content: 37.79
Gene sequence:
>651_bases TTGGATGAAAAGAACGCACCAACCATTGAGTATTATATTGATAACCCTGTAATACCTGCCTGCGCCGGGATAACCCTTGT TAAGGATCTCAGTCACCGCTTTGTTGCATCTAACCTGTTATTTAGCCGGTTCTCTGGTGTGGATCCGTATAGGTTACCGA CTCTTGATGATTCAGATATGCCTTGGGCTGAAAGAGGCGATATTTATAGGGATCATGAGAAAGCGATCCTTGCAGGTGAG GTTTACAATGTTCTTGAACCACTCCCAGGAGTCGTTCATGCATTTTTACATACTTCTAAACAAGTTATATATGATAAGAA TGGATTTCCCGCCGGGACTACAGCAACTGCCATTATTATGAATGGTCATATTGATTTTCATAATGTTACCGGTGTGTCAA AAGTGTTAAAAATATCATCATACAAAGATGTAAAACTTAGCTCCAATGAGGCTAGGTTGCTGTTTTTTCTACTTAAAGGA TTGAAAAGAAAACAAATATCAGAGCTTTTGAATATTAATCTTGCTAATTATGACTACTGCATGAGAAACCTGAAAGTCAA GTTCAATGTGAGTTCAAGTGTTCAGCTTATAGATAAGTGCATTAAGCTAGGGTATCAGGATACATTCCCTTTTCAGATTT TTTTCAAATAG
Upstream 100 bases:
>100_bases AGAGTGAAAGTGAAGGATTATGCTTTCGCTTTACAGTCAAGGCCCTAAAGTCCATGGGAGGACTTCCATGACCAAGATAG ACAATAGACAGTTTTCACTT
Downstream 100 bases:
>100_bases TTATCGTGGGTTTCTTGGTTTTTTCCTATGACTTCTCATAGGATCTTAAATCCTTCTTTTTGACACGTTAACAAAATTAA TATTATTCTACTCCAACACG
Product: LuxR family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 216; Mature: 216
Protein sequence:
>216_residues MDEKNAPTIEYYIDNPVIPACAGITLVKDLSHRFVASNLLFSRFSGVDPYRLPTLDDSDMPWAERGDIYRDHEKAILAGE VYNVLEPLPGVVHAFLHTSKQVIYDKNGFPAGTTATAIIMNGHIDFHNVTGVSKVLKISSYKDVKLSSNEARLLFFLLKG LKRKQISELLNINLANYDYCMRNLKVKFNVSSSVQLIDKCIKLGYQDTFPFQIFFK
Sequences:
>Translated_216_residues MDEKNAPTIEYYIDNPVIPACAGITLVKDLSHRFVASNLLFSRFSGVDPYRLPTLDDSDMPWAERGDIYRDHEKAILAGE VYNVLEPLPGVVHAFLHTSKQVIYDKNGFPAGTTATAIIMNGHIDFHNVTGVSKVLKISSYKDVKLSSNEARLLFFLLKG LKRKQISELLNINLANYDYCMRNLKVKFNVSSSVQLIDKCIKLGYQDTFPFQIFFK >Mature_216_residues MDEKNAPTIEYYIDNPVIPACAGITLVKDLSHRFVASNLLFSRFSGVDPYRLPTLDDSDMPWAERGDIYRDHEKAILAGE VYNVLEPLPGVVHAFLHTSKQVIYDKNGFPAGTTATAIIMNGHIDFHNVTGVSKVLKISSYKDVKLSSNEARLLFFLLKG LKRKQISELLNINLANYDYCMRNLKVKFNVSSSVQLIDKCIKLGYQDTFPFQIFFK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24457; Mature: 24457
Theoretical pI: Translated: 8.43; Mature: 8.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDEKNAPTIEYYIDNPVIPACAGITLVKDLSHRFVASNLLFSRFSGVDPYRLPTLDDSDM CCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC PWAERGDIYRDHEKAILAGEVYNVLEPLPGVVHAFLHTSKQVIYDKNGFPAGTTATAIIM CCHHCCCCEECCCCEEHHHHHHHHHHCCHHHHHHHHHCCCCEEECCCCCCCCCCEEEEEE NGHIDFHNVTGVSKVLKISSYKDVKLSSNEARLLFFLLKGLKRKQISELLNINLANYDYC ECCCCCCCCCHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH MRNLKVKFNVSSSVQLIDKCIKLGYQDTFPFQIFFK HHCCEEEEECCCHHHHHHHHHHCCCCCCCCEEEEEC >Mature Secondary Structure MDEKNAPTIEYYIDNPVIPACAGITLVKDLSHRFVASNLLFSRFSGVDPYRLPTLDDSDM CCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC PWAERGDIYRDHEKAILAGEVYNVLEPLPGVVHAFLHTSKQVIYDKNGFPAGTTATAIIM CCHHCCCCEECCCCEEHHHHHHHHHHCCHHHHHHHHHCCCCEEECCCCCCCCCCEEEEEE NGHIDFHNVTGVSKVLKISSYKDVKLSSNEARLLFFLLKGLKRKQISELLNINLANYDYC ECCCCCCCCCHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH MRNLKVKFNVSSSVQLIDKCIKLGYQDTFPFQIFFK HHCCEEEEECCCHHHHHHHHHHCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA