| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157372352
Identifier: 157372352
GI number: 157372352
Start: 4573178
End: 4574887
Strand: Reverse
Name: 157372352
Synonym: Spro_4118
Alternate gene names: NA
Gene position: 4574887-4573178 (Counterclockwise)
Preceding gene: 157372353
Following gene: 157372351
Centisome position: 83.96
GC content: 53.16
Gene sequence:
>1710_bases ATGCTGAAGGCTATCAAAGAGCTGCTTGTCGGGACCCGGGAGATGCCGGTAAAGCCATCGGCAATCACTTCAGGCTCACG GGGCCCTACGGGCTATTATATACCCGCGTCAGTAGAACAGCTCTTGAGCACGGCGTCTCGTAAGCAGTGTTTACAGCAGT TATGGGAAAACTGTGCACTTCCCAAAGACCTCTATGAACATTTCTATCTGCAGCCACTGAAGCAACTCATCACATTGATG CAGGAGTTGCCGGCAACTCCGCAAGGTGAGTATGCCAGGGAAGGGGGGTTGGTTGATGTCACCCTGCAAACGACGACTTA TGCGGTGCGCCTGGCCAAAGGGCACATGCTGCCACCTGGGGCCGAGCCTGAAGAACAATCGGCCCAGAATGTACAATGGA ATGTCGTGGTGTTTTACGCTGCGCTTTGGCACTACCTGCCGTTGTTGAGCCAACTGCAAGGGGAGTTCCAAAGTGGCCGT ACCTGGTTGCCCGGTCTGACGGTGCCCAGTGAACCTTACCGCTTTCGTTTCAGTGCGATTCAGCCAGCCCCAACATTGAC GACAAGTCAGAGTACGGTGATTGCGGCCCGGCTGTTGCCTGCAGAGGTAATCGACTGGCTATCAACACTGCCGGCGGCTA CACACTCGTTGATGACGATCGCTTCCCGACAGTCTGGCGCTTTACCTGTGATAGACGAAATCGTTCAGGAAGCGGCCAAG CTGGCGCGCGGCGATAGCCTGTCCGTAGCATCCTCTCCGGCATCCATCTCCGACACATTGACAATGGTCTTACCATCGGT GGTGCTAACTACAGAAAAGAGCACCTCTTCAGTACCCGTGGTTGATTTACAAAGTGCAGTCAGCGACACCAACCTTCCGA TCGTTGAGGAACAACTGCCGGCGGAGATATTAAATCAGCCCGAAGAAAATGCAGCGTCAGCGACGGATGTATTACTAAGC GCGGCCTTAGATATGCCGGTAAACGATCAACCTTTGGTTGAGGGGGGCCTGGGGCCTGAAACGGTGGTCGGCATCGAGGA GGATATGCAGACTCTGTTGTCATTGATGGCGGTTGAGGTGTCTGCTCCGGTAATTCAGACAGAACAGGAGTCCGGGGACG CCCCTCACCAGGATGAAGGCCCTACACCTGCCGATAGCCCTGCGATTACTGCTGAAGTGACTCAGGTAGTTGAGGCTGCC GAAATAAACCGGGAGTCAGACGCCATCGATGATATCGCTCCCGAGGCGGAAAATTCAATAACCGGATTTTGTGCCCCTCA AACTACTGACTTCGCTGCCTCGCAATCGCAAAATCTGGGCATTCAAGGTGATGGGGGCATAGCTCCCGGAGAAGTCTTTT GGCGTTGGTTAGCTGATGGACTCAATTCTAATGAGATCCTCATCAACTCTGTCACCGCGCGGGTTCATCTTGTTTCTGGT TTTGTCTTCATCACCGTACCTGGGATTTTTTATTTGTACCTGAAACAGGCTGGCCAGGATGGCTCTCAACGAGAGGGCCT TCAGGAGGATTTTGAACGCCTGGAGAAGCATCGTCGGGTCAAAGGTAAACGATTTTATTTTGCACACCTGTATGAAACAT CAGAGCGCACAGGTGCGTTTAAACGAACCAAAGGTTACCTCGTTAAAGCAAGTTTGCTCTATCGGGGGAAAAACCTGCCG GACGATAGTCCGGTTCTGGTGATCCCTTGA
Upstream 100 bases:
>100_bases AGCGCCGGTCATGATTCAACGGAGTGCTGCTAATGCCTTATTCTGATACACCTGAACAAGCCGCCATCATCGAGCGTGAT GTTATTGCTGGAGGCGTAGC
Downstream 100 bases:
>100_bases TAGGGATTAATCGTGTCTTGTGACTACATCATGTTCGCAAGATTTCTATTTAAACTAGGGAGATATCATGCATAAATCTT GTGTTATGGATTGGGACACC
Product: relaxase
Products: NA
Alternate protein names: Helicase; Relaxase-Related Protein; Helicase/Relaxase
Number of amino acids: Translated: 569; Mature: 569
Protein sequence:
>569_residues MLKAIKELLVGTREMPVKPSAITSGSRGPTGYYIPASVEQLLSTASRKQCLQQLWENCALPKDLYEHFYLQPLKQLITLM QELPATPQGEYAREGGLVDVTLQTTTYAVRLAKGHMLPPGAEPEEQSAQNVQWNVVVFYAALWHYLPLLSQLQGEFQSGR TWLPGLTVPSEPYRFRFSAIQPAPTLTTSQSTVIAARLLPAEVIDWLSTLPAATHSLMTIASRQSGALPVIDEIVQEAAK LARGDSLSVASSPASISDTLTMVLPSVVLTTEKSTSSVPVVDLQSAVSDTNLPIVEEQLPAEILNQPEENAASATDVLLS AALDMPVNDQPLVEGGLGPETVVGIEEDMQTLLSLMAVEVSAPVIQTEQESGDAPHQDEGPTPADSPAITAEVTQVVEAA EINRESDAIDDIAPEAENSITGFCAPQTTDFAASQSQNLGIQGDGGIAPGEVFWRWLADGLNSNEILINSVTARVHLVSG FVFITVPGIFYLYLKQAGQDGSQREGLQEDFERLEKHRRVKGKRFYFAHLYETSERTGAFKRTKGYLVKASLLYRGKNLP DDSPVLVIP
Sequences:
>Translated_569_residues MLKAIKELLVGTREMPVKPSAITSGSRGPTGYYIPASVEQLLSTASRKQCLQQLWENCALPKDLYEHFYLQPLKQLITLM QELPATPQGEYAREGGLVDVTLQTTTYAVRLAKGHMLPPGAEPEEQSAQNVQWNVVVFYAALWHYLPLLSQLQGEFQSGR TWLPGLTVPSEPYRFRFSAIQPAPTLTTSQSTVIAARLLPAEVIDWLSTLPAATHSLMTIASRQSGALPVIDEIVQEAAK LARGDSLSVASSPASISDTLTMVLPSVVLTTEKSTSSVPVVDLQSAVSDTNLPIVEEQLPAEILNQPEENAASATDVLLS AALDMPVNDQPLVEGGLGPETVVGIEEDMQTLLSLMAVEVSAPVIQTEQESGDAPHQDEGPTPADSPAITAEVTQVVEAA EINRESDAIDDIAPEAENSITGFCAPQTTDFAASQSQNLGIQGDGGIAPGEVFWRWLADGLNSNEILINSVTARVHLVSG FVFITVPGIFYLYLKQAGQDGSQREGLQEDFERLEKHRRVKGKRFYFAHLYETSERTGAFKRTKGYLVKASLLYRGKNLP DDSPVLVIP >Mature_569_residues MLKAIKELLVGTREMPVKPSAITSGSRGPTGYYIPASVEQLLSTASRKQCLQQLWENCALPKDLYEHFYLQPLKQLITLM QELPATPQGEYAREGGLVDVTLQTTTYAVRLAKGHMLPPGAEPEEQSAQNVQWNVVVFYAALWHYLPLLSQLQGEFQSGR TWLPGLTVPSEPYRFRFSAIQPAPTLTTSQSTVIAARLLPAEVIDWLSTLPAATHSLMTIASRQSGALPVIDEIVQEAAK LARGDSLSVASSPASISDTLTMVLPSVVLTTEKSTSSVPVVDLQSAVSDTNLPIVEEQLPAEILNQPEENAASATDVLLS AALDMPVNDQPLVEGGLGPETVVGIEEDMQTLLSLMAVEVSAPVIQTEQESGDAPHQDEGPTPADSPAITAEVTQVVEAA EINRESDAIDDIAPEAENSITGFCAPQTTDFAASQSQNLGIQGDGGIAPGEVFWRWLADGLNSNEILINSVTARVHLVSG FVFITVPGIFYLYLKQAGQDGSQREGLQEDFERLEKHRRVKGKRFYFAHLYETSERTGAFKRTKGYLVKASLLYRGKNLP DDSPVLVIP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61701; Mature: 61701
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKAIKELLVGTREMPVKPSAITSGSRGPTGYYIPASVEQLLSTASRKQCLQQLWENCAL CHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHCCC PKDLYEHFYLQPLKQLITLMQELPATPQGEYAREGGLVDVTLQTTTYAVRLAKGHMLPPG CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCEEEEEEECCEEEEEECCCCCCCCC AEPEEQSAQNVQWNVVVFYAALWHYLPLLSQLQGEFQSGRTWLPGLTVPSEPYRFRFSAI CCCCHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCEEEEEEE QPAPTLTTSQSTVIAARLLPAEVIDWLSTLPAATHSLMTIASRQSGALPVIDEIVQEAAK CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH LARGDSLSVASSPASISDTLTMVLPSVVLTTEKSTSSVPVVDLQSAVSDTNLPIVEEQLP HHCCCCCEECCCCCCHHHHHHHHHHHHHEEECCCCCCCCEEEHHHHHCCCCCCCHHHHCC AEILNQPEENAASATDVLLSAALDMPVNDQPLVEGGLGPETVVGIEEDMQTLLSLMAVEV HHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHEECCHHHHHHHHHHHHHHH SAPVIQTEQESGDAPHQDEGPTPADSPAITAEVTQVVEAAEINRESDAIDDIAPEAENSI CCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCC TGFCAPQTTDFAASQSQNLGIQGDGGIAPGEVFWRWLADGLNSNEILINSVTARVHLVSG EEEECCCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEHHHHEEHHHHC FVFITVPGIFYLYLKQAGQDGSQREGLQEDFERLEKHRRVKGKRFYFAHLYETSERTGAF EEEEHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHCCCCCEEEEEEEECCHHHCCCH KRTKGYLVKASLLYRGKNLPDDSPVLVIP HHCCCEEEEEEHHHCCCCCCCCCCEEEEC >Mature Secondary Structure MLKAIKELLVGTREMPVKPSAITSGSRGPTGYYIPASVEQLLSTASRKQCLQQLWENCAL CHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHCCC PKDLYEHFYLQPLKQLITLMQELPATPQGEYAREGGLVDVTLQTTTYAVRLAKGHMLPPG CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCEEEEEEECCEEEEEECCCCCCCCC AEPEEQSAQNVQWNVVVFYAALWHYLPLLSQLQGEFQSGRTWLPGLTVPSEPYRFRFSAI CCCCHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCEEEEEEE QPAPTLTTSQSTVIAARLLPAEVIDWLSTLPAATHSLMTIASRQSGALPVIDEIVQEAAK CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH LARGDSLSVASSPASISDTLTMVLPSVVLTTEKSTSSVPVVDLQSAVSDTNLPIVEEQLP HHCCCCCEECCCCCCHHHHHHHHHHHHHEEECCCCCCCCEEEHHHHHCCCCCCCHHHHCC AEILNQPEENAASATDVLLSAALDMPVNDQPLVEGGLGPETVVGIEEDMQTLLSLMAVEV HHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHEECCHHHHHHHHHHHHHHH SAPVIQTEQESGDAPHQDEGPTPADSPAITAEVTQVVEAAEINRESDAIDDIAPEAENSI CCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCC TGFCAPQTTDFAASQSQNLGIQGDGGIAPGEVFWRWLADGLNSNEILINSVTARVHLVSG EEEECCCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEHHHHEEHHHHC FVFITVPGIFYLYLKQAGQDGSQREGLQEDFERLEKHRRVKGKRFYFAHLYETSERTGAF EEEEHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHCCCCCEEEEEEEECCHHHCCCH KRTKGYLVKASLLYRGKNLPDDSPVLVIP HHCCCEEEEEEHHHCCCCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA