| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157372331
Identifier: 157372331
GI number: 157372331
Start: 4554719
End: 4555345
Strand: Reverse
Name: 157372331
Synonym: Spro_4097
Alternate gene names: NA
Gene position: 4555345-4554719 (Counterclockwise)
Preceding gene: 157372332
Following gene: 157372330
Centisome position: 83.6
GC content: 56.14
Gene sequence:
>627_bases ATGATGTCTCCGCAGCATGTCGGTATTGCGCTGATGGCGGATCCGGTGCTGGCTGTCCTGTTGATAGGGCTGTTTATTGC GGTGATGGCCGGCCTGAATCTGCATGGCCGCGAGTCGGCTTCCGCACGGCGCCACCGGCGTTATCGTACGACGGCAGCCC GTGTTCTGCAGCGGCTGCCGCAACTGGGTGGTGATGCTCAGCGTCTGGCGTACCTGCGCAAAATCAATCCCTATGTCTTT GAAGAGCTGCTGCTCCTGGCATTTGAGCGCCAGGGATACGCGGTTATCCGCAATGCTTCCTACAGCGGTGACGGTGGTCT GGATGGTCAGGTCATCATCGGTGACCAAAAATATCTTATCCAGGCCAAGCGTTACGGCCGGGCTATCACACCGTCCCATA TCAAGAGTTTTGGTGCGTTGCTGCGACATCACCATTGCGAAGGGTTTTTCATTCATACCGGCCGTACTGGCCACCTTAGT CGGGCATTGCTGCAAAACCATCCCCACGTTCACCTGGTCAGTGGCCAGAAGCTGCTTGCATTGCTTGCCGGCAATGCGGA GTGGTTGTCATTTCTGACTGGGAGCACGGTAACCAAACGGAGTACCTCACATGTTTCATCAGTCTAA
Upstream 100 bases:
>100_bases CGATGGCGCCAGCCTCCGGCAGTGAGTTGGCGCGCCGGCTGCAGCTGTCGAATTACCCGGTACTCATCACCGATACCGGT CTGTCTCAGCAGGTCGGACC
Downstream 100 bases:
>100_bases TTATGTTGTCGTCGCTACCCGCTTTTTGTCAGCGATACTCAGAGTCCTGTTGGTCTGGCCAGGTGTGGTTCTGGCGATTT TTGGCTTCATGTTTTTTATG
Product: restriction endonuclease
Products: NA
Alternate protein names: Endonuclease
Number of amino acids: Translated: 208; Mature: 208
Protein sequence:
>208_residues MMSPQHVGIALMADPVLAVLLIGLFIAVMAGLNLHGRESASARRHRRYRTTAARVLQRLPQLGGDAQRLAYLRKINPYVF EELLLLAFERQGYAVIRNASYSGDGGLDGQVIIGDQKYLIQAKRYGRAITPSHIKSFGALLRHHHCEGFFIHTGRTGHLS RALLQNHPHVHLVSGQKLLALLAGNAEWLSFLTGSTVTKRSTSHVSSV
Sequences:
>Translated_208_residues MMSPQHVGIALMADPVLAVLLIGLFIAVMAGLNLHGRESASARRHRRYRTTAARVLQRLPQLGGDAQRLAYLRKINPYVF EELLLLAFERQGYAVIRNASYSGDGGLDGQVIIGDQKYLIQAKRYGRAITPSHIKSFGALLRHHHCEGFFIHTGRTGHLS RALLQNHPHVHLVSGQKLLALLAGNAEWLSFLTGSTVTKRSTSHVSSV >Mature_208_residues MMSPQHVGIALMADPVLAVLLIGLFIAVMAGLNLHGRESASARRHRRYRTTAARVLQRLPQLGGDAQRLAYLRKINPYVF EELLLLAFERQGYAVIRNASYSGDGGLDGQVIIGDQKYLIQAKRYGRAITPSHIKSFGALLRHHHCEGFFIHTGRTGHLS RALLQNHPHVHLVSGQKLLALLAGNAEWLSFLTGSTVTKRSTSHVSSV
Specific function: Unknown
COG id: COG1715
COG function: function code V; Restriction endonuclease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22931; Mature: 22931
Theoretical pI: Translated: 11.09; Mature: 11.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMSPQHVGIALMADPVLAVLLIGLFIAVMAGLNLHGRESASARRHRRYRTTAARVLQRLP CCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH QLGGDAQRLAYLRKINPYVFEELLLLAFERQGYAVIRNASYSGDGGLDGQVIIGDQKYLI HCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEECCHHHHH QAKRYGRAITPSHIKSFGALLRHHHCEGFFIHTGRTGHLSRALLQNHPHVHLVSGQKLLA HHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCCCEEEECCHHEEH LLAGNAEWLSFLTGSTVTKRSTSHVSSV HHHCCHHHHHHHHCCCCCCCCCHHHCCC >Mature Secondary Structure MMSPQHVGIALMADPVLAVLLIGLFIAVMAGLNLHGRESASARRHRRYRTTAARVLQRLP CCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH QLGGDAQRLAYLRKINPYVFEELLLLAFERQGYAVIRNASYSGDGGLDGQVIIGDQKYLI HCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEECCHHHHH QAKRYGRAITPSHIKSFGALLRHHHCEGFFIHTGRTGHLSRALLQNHPHVHLVSGQKLLA HHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCCCEEEECCHHEEH LLAGNAEWLSFLTGSTVTKRSTSHVSSV HHHCCHHHHHHHHCCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA