| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157372330
Identifier: 157372330
GI number: 157372330
Start: 4552098
End: 4554290
Strand: Reverse
Name: 157372330
Synonym: Spro_4096
Alternate gene names: NA
Gene position: 4554290-4552098 (Counterclockwise)
Preceding gene: 157372331
Following gene: 157372329
Centisome position: 83.58
GC content: 58.55
Gene sequence:
>2193_bases ATGGAAGTATCAATGCGCGAGGGGAGCGCAGCATGCACTTCCAATATGACAAGCCTGCGAATGATAAGGAAGGTCGCAAT GAGTAACCGGCATGTAATGGAAGCCTTGTTGCGCCCGGCCGTGGAACTCAACACGGCGATTGTGGCCGGAGGCGCGGCTG TGGTTTGTGCGATAGCGCCCTGGTCGGTAGCGCTGGCGCCAGAGGTGAGCTATGTCACCGCCGGCAGCTTTGCAGTGTTG TCTGCCGTACGTGCGCGCCAGGGGATGCGAGTGATCCGCTACCGCGGTAACCTGCGCCGGTTACCGCGGTATGTCATGGA AAGCCGACAGATCCCGGTGAGCCGGCAGCGACTGTTCCTGGGGCGGGGTTTTCGCTGGCAGCAGAAGCACACCCAGCGCC TGATGGACACCCGTCGTCCAGAGGTTGAGAAGTATGTTCAGCCGCCAAAAATGTACCAGATGGCGCGGCACCTGGAGCTA AAAACCGAATATACCCTGCCATGGTTGTCCCAACTGCTGCGTAAGGACTCCCCGCTCAATCCGGTCAGGCCGCTGCCACC GGTCGGGGGGAACCCGGCGATCCACGGTATTGAACCCGATGAGCTCGATGTCTCGATGGCGCTTGGCGAACGCGTAGGGC ATAGCCTGGTGCTGGGGACCACCCGTGTGGGCAAAACGCGTCTCGCCGAGTTACTGATCACCCAGGATATTCGCCGCGGT GATATCACCATCGTGTTTGATCCAAAAGGTGATGCAGACTTGCTGCGGCGGGTCTGGGCTGAAGCTCACCGTGCTGGCCG CGGGGATGAGCTGTTCATCTTCCACCTAGGCTGGCCAGATATCTCGGCACGCTATAACGCCGTGGGGCGTTTTGAGCGGG TGTCAGAGGTGGCTGGTCGTATCTCTGGTCAGTTAAGCGGGGAGGGCAACAGTGCGGCGTTCCGTGAGTTTGCCTGGCGA TTCGTCAACATCGTCGCGCGTGCCCTGGTTGCGTTGGGGCAGCGCCCGGACTACACCCTGATCACCCGATATGTGAACAA CATCAGTGAACTGTATGAGACCTATGCGAAGAAGGTGATTGAAACGCGTATGCCGGCACTGCAGCAGCAAATCGACAATA ACCTGCAGGTGCTGACGGAAGAGGATGTGCCGCGCAATATGCAGGGACAACCGAACGCGGTCAAAATATTTGCAGTCGAA ATGGCCCTGAGCTCGGAGGCCGGCAAGCAGCTGTACGACCCTATTCTGGATGGCCTGCGCTCGGCCGTGCGTTATGACCG TACCTACTTCGATAAAATCGTCGCCTCCCTGTTGCCGCTACTGGAGAAACTCACCACTGGCAAGACTGCGGAGCTGTTGG CGCCGAACTACATGGATATGAGCGATCCAAGGCCCATTTTTGACTGGGAGCAGGTCATCCGCAAGCGCGGTATTGTCTAC GTGGGGTTGGATGCCTTGTCGGACGGGGTGGTCGCCTCTGCCGTCGGCAACAGCATGTTTGCCGACCTGGTATCGGTGGC CGGCCATATCTATAAACACGGCATGCACGGCGGGTTGCCGACCCGGGCAGACGGTAAACTGCCTATCAACCTGCACTGTG ACGAGTTCAATGAGTTGATGGGGGACGAATTTATCCCTCTTATCAACAAAGGCGGTGGCGCCGGTATGCAAGTGACGGCC TACACGCAAACCGAGTCGGATATCGAGGCGCGCATCGGCAGTACCGCCAAGGCGGCTCAGGTCACGGGGAACTTCAATAC CCTGATCATGCTCCGCGTGCGTGAGAACCGGACCGCGCAGTTACTCACCACACAGTTGCCGGAAGTGGATATCTACACCA AAACCTTGGTATCAGGGCATGCCGATACGGCCGATGTGGAGAAGGGACAGGATTTTACTTCCAATACCCAAGACCGCGTC GGTACCGTAAAAGCCCCACTGCTTGCCCCGGCGGATGTGATTAACCTGCCGAAAGGACAGGCGTTCGCGCTACTGGAAGG CGGTCAACTGTGGAAAATTCGGATGCCACTGCCCAGTGGTGACAGGGATGATGCGCTTATGCCGGCCAACCTGCAGAAGA TTGCCGAGGAGATGCAGCGCAACTACCGTACCAGCGAGTCCTGGTGGTCAGCCAGCACGGTAATGCCGGATGTTGCCATC CAAGGGGGGCTGAATGTCGCAAGCGGTGAATAA
Upstream 100 bases:
>100_bases ATTCTCGGCATTGGGAGCACCTTGCTCGCATTTGGTGTGTTGGTCGAGCTGTGTTCATTGCTGATCAGATGCCGTCAGAA TAATCGGAGTGCTGTTCACT
Downstream 100 bases:
>100_bases ACAGCCTCAGCAGCCCGTACAACCCCGTAAGCATGGGCTGTTTTACAATGTGTTGTGGGGCTGGCCCTGGATGCTGATCG GGATGTTCCTGGCTTCGCTT
Product: putative plasmid transfer protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 730; Mature: 730
Protein sequence:
>730_residues MEVSMREGSAACTSNMTSLRMIRKVAMSNRHVMEALLRPAVELNTAIVAGGAAVVCAIAPWSVALAPEVSYVTAGSFAVL SAVRARQGMRVIRYRGNLRRLPRYVMESRQIPVSRQRLFLGRGFRWQQKHTQRLMDTRRPEVEKYVQPPKMYQMARHLEL KTEYTLPWLSQLLRKDSPLNPVRPLPPVGGNPAIHGIEPDELDVSMALGERVGHSLVLGTTRVGKTRLAELLITQDIRRG DITIVFDPKGDADLLRRVWAEAHRAGRGDELFIFHLGWPDISARYNAVGRFERVSEVAGRISGQLSGEGNSAAFREFAWR FVNIVARALVALGQRPDYTLITRYVNNISELYETYAKKVIETRMPALQQQIDNNLQVLTEEDVPRNMQGQPNAVKIFAVE MALSSEAGKQLYDPILDGLRSAVRYDRTYFDKIVASLLPLLEKLTTGKTAELLAPNYMDMSDPRPIFDWEQVIRKRGIVY VGLDALSDGVVASAVGNSMFADLVSVAGHIYKHGMHGGLPTRADGKLPINLHCDEFNELMGDEFIPLINKGGGAGMQVTA YTQTESDIEARIGSTAKAAQVTGNFNTLIMLRVRENRTAQLLTTQLPEVDIYTKTLVSGHADTADVEKGQDFTSNTQDRV GTVKAPLLAPADVINLPKGQAFALLEGGQLWKIRMPLPSGDRDDALMPANLQKIAEEMQRNYRTSESWWSASTVMPDVAI QGGLNVASGE
Sequences:
>Translated_730_residues MEVSMREGSAACTSNMTSLRMIRKVAMSNRHVMEALLRPAVELNTAIVAGGAAVVCAIAPWSVALAPEVSYVTAGSFAVL SAVRARQGMRVIRYRGNLRRLPRYVMESRQIPVSRQRLFLGRGFRWQQKHTQRLMDTRRPEVEKYVQPPKMYQMARHLEL KTEYTLPWLSQLLRKDSPLNPVRPLPPVGGNPAIHGIEPDELDVSMALGERVGHSLVLGTTRVGKTRLAELLITQDIRRG DITIVFDPKGDADLLRRVWAEAHRAGRGDELFIFHLGWPDISARYNAVGRFERVSEVAGRISGQLSGEGNSAAFREFAWR FVNIVARALVALGQRPDYTLITRYVNNISELYETYAKKVIETRMPALQQQIDNNLQVLTEEDVPRNMQGQPNAVKIFAVE MALSSEAGKQLYDPILDGLRSAVRYDRTYFDKIVASLLPLLEKLTTGKTAELLAPNYMDMSDPRPIFDWEQVIRKRGIVY VGLDALSDGVVASAVGNSMFADLVSVAGHIYKHGMHGGLPTRADGKLPINLHCDEFNELMGDEFIPLINKGGGAGMQVTA YTQTESDIEARIGSTAKAAQVTGNFNTLIMLRVRENRTAQLLTTQLPEVDIYTKTLVSGHADTADVEKGQDFTSNTQDRV GTVKAPLLAPADVINLPKGQAFALLEGGQLWKIRMPLPSGDRDDALMPANLQKIAEEMQRNYRTSESWWSASTVMPDVAI QGGLNVASGE >Mature_730_residues MEVSMREGSAACTSNMTSLRMIRKVAMSNRHVMEALLRPAVELNTAIVAGGAAVVCAIAPWSVALAPEVSYVTAGSFAVL SAVRARQGMRVIRYRGNLRRLPRYVMESRQIPVSRQRLFLGRGFRWQQKHTQRLMDTRRPEVEKYVQPPKMYQMARHLEL KTEYTLPWLSQLLRKDSPLNPVRPLPPVGGNPAIHGIEPDELDVSMALGERVGHSLVLGTTRVGKTRLAELLITQDIRRG DITIVFDPKGDADLLRRVWAEAHRAGRGDELFIFHLGWPDISARYNAVGRFERVSEVAGRISGQLSGEGNSAAFREFAWR FVNIVARALVALGQRPDYTLITRYVNNISELYETYAKKVIETRMPALQQQIDNNLQVLTEEDVPRNMQGQPNAVKIFAVE MALSSEAGKQLYDPILDGLRSAVRYDRTYFDKIVASLLPLLEKLTTGKTAELLAPNYMDMSDPRPIFDWEQVIRKRGIVY VGLDALSDGVVASAVGNSMFADLVSVAGHIYKHGMHGGLPTRADGKLPINLHCDEFNELMGDEFIPLINKGGGAGMQVTA YTQTESDIEARIGSTAKAAQVTGNFNTLIMLRVRENRTAQLLTTQLPEVDIYTKTLVSGHADTADVEKGQDFTSNTQDRV GTVKAPLLAPADVINLPKGQAFALLEGGQLWKIRMPLPSGDRDDALMPANLQKIAEEMQRNYRTSESWWSASTVMPDVAI QGGLNVASGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 80916; Mature: 80916
Theoretical pI: Translated: 9.02; Mature: 9.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVSMREGSAACTSNMTSLRMIRKVAMSNRHVMEALLRPAVELNTAIVAGGAAVVCAIAP CCCCCCCCCHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCEEEECCCEEEEEECC WSVALAPEVSYVTAGSFAVLSAVRARQGMRVIRYRGNLRRLPRYVMESRQIPVSRQRLFL CEEEECCCCCEEECCHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHCCCCHHHHHHHH GRGFRWQQKHTQRLMDTRRPEVEKYVQPPKMYQMARHLELKTEYTLPWLSQLLRKDSPLN CCCCCHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCC PVRPLPPVGGNPAIHGIEPDELDVSMALGERVGHSLVLGTTRVGKTRLAELLITQDIRRG CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCCCC DITIVFDPKGDADLLRRVWAEAHRAGRGDELFIFHLGWPDISARYNAVGRFERVSEVAGR CEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHH ISGQLSGEGNSAAFREFAWRFVNIVARALVALGQRPDYTLITRYVNNISELYETYAKKVI HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH ETRMPALQQQIDNNLQVLTEEDVPRNMQGQPNAVKIFAVEMALSSEAGKQLYDPILDGLR HHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHH SAVRYDRTYFDKIVASLLPLLEKLTTGKTAELLAPNYMDMSDPRPIFDWEQVIRKRGIVY HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHCCCEE VGLDALSDGVVASAVGNSMFADLVSVAGHIYKHGMHGGLPTRADGKLPINLHCDEFNELM EEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEHHHHHHHC GDEFIPLINKGGGAGMQVTAYTQTESDIEARIGSTAKAAQVTGNFNTLIMLRVRENRTAQ CCCCCHHEECCCCCCEEEEEEECCCHHHHHHCCCCHHHEEECCCCCEEEEEEECCCCCHH LLTTQLPEVDIYTKTLVSGHADTADVEKGQDFTSNTQDRVGTVKAPLLAPADVINLPKGQ HHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHCCCCCC AFALLEGGQLWKIRMPLPSGDRDDALMPANLQKIAEEMQRNYRTSESWWSASTVMPDVAI EEEEEECCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCHHH QGGLNVASGE CCCCCCCCCC >Mature Secondary Structure MEVSMREGSAACTSNMTSLRMIRKVAMSNRHVMEALLRPAVELNTAIVAGGAAVVCAIAP CCCCCCCCCHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCEEEECCCEEEEEECC WSVALAPEVSYVTAGSFAVLSAVRARQGMRVIRYRGNLRRLPRYVMESRQIPVSRQRLFL CEEEECCCCCEEECCHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHCCCCHHHHHHHH GRGFRWQQKHTQRLMDTRRPEVEKYVQPPKMYQMARHLELKTEYTLPWLSQLLRKDSPLN CCCCCHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCC PVRPLPPVGGNPAIHGIEPDELDVSMALGERVGHSLVLGTTRVGKTRLAELLITQDIRRG CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCCCC DITIVFDPKGDADLLRRVWAEAHRAGRGDELFIFHLGWPDISARYNAVGRFERVSEVAGR CEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHH ISGQLSGEGNSAAFREFAWRFVNIVARALVALGQRPDYTLITRYVNNISELYETYAKKVI HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH ETRMPALQQQIDNNLQVLTEEDVPRNMQGQPNAVKIFAVEMALSSEAGKQLYDPILDGLR HHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHH SAVRYDRTYFDKIVASLLPLLEKLTTGKTAELLAPNYMDMSDPRPIFDWEQVIRKRGIVY HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHCCCEE VGLDALSDGVVASAVGNSMFADLVSVAGHIYKHGMHGGLPTRADGKLPINLHCDEFNELM EEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEHHHHHHHC GDEFIPLINKGGGAGMQVTAYTQTESDIEARIGSTAKAAQVTGNFNTLIMLRVRENRTAQ CCCCCHHEECCCCCCEEEEEEECCCHHHHHHCCCCHHHEEECCCCCEEEEEEECCCCCHH LLTTQLPEVDIYTKTLVSGHADTADVEKGQDFTSNTQDRVGTVKAPLLAPADVINLPKGQ HHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHCCCCCC AFALLEGGQLWKIRMPLPSGDRDDALMPANLQKIAEEMQRNYRTSESWWSASTVMPDVAI EEEEEECCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCHHH QGGLNVASGE CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA