| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is torZ [C]
Identifier: 157372066
GI number: 157372066
Start: 4240534
End: 4242792
Strand: Reverse
Name: torZ [C]
Synonym: Spro_3831
Alternate gene names: 157372066
Gene position: 4242792-4240534 (Counterclockwise)
Preceding gene: 157372068
Following gene: 157372065
Centisome position: 77.87
GC content: 59.89
Gene sequence:
>2259_bases ATGTCGATTAAACGTTACCCGCAACTCGCTCACTGGGGGGCGTATACCGCCGTGGTTGAAGACGGCAGGCTTATCCGCTG TGAGCCGTTTGCAGGCGATCCGGATCCTTCCCCGATGCTCGACTCCATCGCGCCGATGGCCTATTCCGACAAACGGATCC GTAAGCCGGCGGTGCGCCGCTCCTGGCTGCAAAAGCGTGAAGGCAGTGACCGCACGCTGCGTGGCCGTGAGGATTTTGTC GAAGTGGACTGGGATCTGGCGCTCGATCTGGTGGCGGAAGAAAACCGCCGCGTGCGCGATCGCTATGGCCCCTCGGGCCT GTTTACCGGCTCCTATGGTTGGTCATCCGCCGGGCGTTTGCATCATGCGCGTTCGCTGGTGCGGCGCTTTTATTTCGGCG GTGGCGGCGGTGTTGATCAGTTAGGCAACTACAGTTGGGGCGCTGCGCAGTTTTTCCTGCCGTATGTGATTGGTACCTTC ACCCCATTGACCGGGCGCGTCACCAGTTGGCCGAGCGTGGTTGAGCACTGTGAACTGTTTGTCGCTTTCGGTGGGTTGGC ACTGAAAAATGCCCAGGTATCGTCCGGTGGCGCGGCGGAACACTCGCTCAAACCATGGTTGCAAAAACTGGTGCAGAAAG GCACCCCGGTTATCAACATCAGCCCGATGCGTGATGACTGCCCGGCATTTGTGAATGCCGAATGGATCCCAATCCGCCCG AATACCGATGTGGCGTTAATGCTGGCACTGGCGTATGAAATTCAGCGTCGGGGCGCGCAGGACGAAGCATTTCTCTATAG CCACTGTGCCGGTTATGACCAACTGGCGAGTTATCTGCGCGGCACCGATGACGGCGTGGCGAAAACCCCAGAATGGGCCA GTGCGATCACCGGTATCCCGGCGGCGCGCATTGGCTTGCTCGCACAGCAACTGATTGGCGTGCGAAGCTTTCTTACCTGC TCCTATTCCGTTCAGCGCGCTCATCGTGGCGAACAGCCCTATTGGATGATGATTGCCCTGTCGGCGATGCTCGGCCAGGT TGGGCTACCGGGCGGCGGCTTCTCGTTTGGCCACGGTTCAATGAACGGGGTTGGCAACCCGCGCGTGGATACGCCGGGGC CAATGATGCCGGTGGGGCCTAACCCTTGTGGGTTGGCGATCCCGGTGGCACGCATTTGCGACATGTTGCTGCAACCGGGC GAACCCTACCAGTTCCGTGGCGAGACGCTGCACTACCCGGATATCCATCTGGTGCACTGGGCCGGGGGTAACCCGTTCCA TCATCACCAACAGTTAAACCGGCTGGTGGAAGGCTGGCAGAAGCCGGATACGGTGATTGTGCAGGATATCTGGTGGACCC CGGCCGCCAAAATGGCAGATATCGTGCTGCCGGTAACCACCTCGCTGGAACGTAACGATATCGGCGGTTCATCGCGCGAT CGCTACGTGTTGGCGATGCATCAGGCCATTGCGCCGCAGCATCAGGCGCGTAACGACTTTGATATTTTTGCCGATCTGGC GGAGCGACTGGGTTACCGCGAACAATTCACCGAAAATCGCGATGAACGAGCCTGGATCGAATCTATCTATCAGCAGTGCG GACAGGCGCAGGCCGGTACCGGTGTGGAATGGCCCGAGTTCGAGGATTTTTGGCGTAAAGGCTATGTCGAGCTGCCGGCA CCGGCGAAAGAATTTGTGTTCTTTGACGACTTCCGCGCCGACCCACAGGCCAACCCGCTGCAAACTCCGAGCGGCAAGAT TGAGTTGTTCAGCGAGAAAATTGCCGGCTACGGTTATGCTGATTTTGCACCGCATCCGCAGTGGCAGCCGCCGGTCGAAT GGCTGGGGGCGCCACAGGCCAAAGAGTGGCCGCTGCACCTGATTTCCATCCAGCCGAGCGATCGTTTACACAGCCAGATG GACCCGGCCCCCCTGGCGCAGGGCAATAAAACCGCCGGGCGCGAAACGCTGTATATGCACCCGCAGGATGCGATAAAACG CGGTATTGTCGATGGCGTTGAGGTGTTGGTCAGCAATGCGCGCGGCAGTTGTCTGGCGGGCGTCGCTATTACCGACGGCG TTACACCGGGCGTGGTGCTGATGGCCACCGGTGCCTGGTTTGATCCGGGCTTCGGCAGCCAGCGGCTGCAGGTGGAACAG TCCGGCAATCCGAACGTATTAACGCTGGATATCGGCACCTCGCCGTTAACTCAGGGGCCGAACGCCATGAGCTGCCTGGT CGAGGTGAGCGTTCGATAG
Upstream 100 bases:
>100_bases GTGCTTAGACCTGCGCAGCTCAGTAATAGAGCCATTTGTGCTTTGGCGGCGCACGGCAGCTAATGTTACTTTTGTGTATC CCATTTTGTTTGAGAACCGC
Downstream 100 bases:
>100_bases GTAATATACCCTATGAATTTCAAGTTGCAGCTAGGCGACCAACTCGCTCATCCCCAGGCGCTTACTTGAGTAAGTAACTG GGGTGAGCGAGTGCAGATAA
Product: molybdopterin oxidoreductase
Products: Biotin [C]
Alternate protein names: BDS reductase; BSO reductase [H]
Number of amino acids: Translated: 752; Mature: 751
Protein sequence:
>752_residues MSIKRYPQLAHWGAYTAVVEDGRLIRCEPFAGDPDPSPMLDSIAPMAYSDKRIRKPAVRRSWLQKREGSDRTLRGREDFV EVDWDLALDLVAEENRRVRDRYGPSGLFTGSYGWSSAGRLHHARSLVRRFYFGGGGGVDQLGNYSWGAAQFFLPYVIGTF TPLTGRVTSWPSVVEHCELFVAFGGLALKNAQVSSGGAAEHSLKPWLQKLVQKGTPVINISPMRDDCPAFVNAEWIPIRP NTDVALMLALAYEIQRRGAQDEAFLYSHCAGYDQLASYLRGTDDGVAKTPEWASAITGIPAARIGLLAQQLIGVRSFLTC SYSVQRAHRGEQPYWMMIALSAMLGQVGLPGGGFSFGHGSMNGVGNPRVDTPGPMMPVGPNPCGLAIPVARICDMLLQPG EPYQFRGETLHYPDIHLVHWAGGNPFHHHQQLNRLVEGWQKPDTVIVQDIWWTPAAKMADIVLPVTTSLERNDIGGSSRD RYVLAMHQAIAPQHQARNDFDIFADLAERLGYREQFTENRDERAWIESIYQQCGQAQAGTGVEWPEFEDFWRKGYVELPA PAKEFVFFDDFRADPQANPLQTPSGKIELFSEKIAGYGYADFAPHPQWQPPVEWLGAPQAKEWPLHLISIQPSDRLHSQM DPAPLAQGNKTAGRETLYMHPQDAIKRGIVDGVEVLVSNARGSCLAGVAITDGVTPGVVLMATGAWFDPGFGSQRLQVEQ SGNPNVLTLDIGTSPLTQGPNAMSCLVEVSVR
Sequences:
>Translated_752_residues MSIKRYPQLAHWGAYTAVVEDGRLIRCEPFAGDPDPSPMLDSIAPMAYSDKRIRKPAVRRSWLQKREGSDRTLRGREDFV EVDWDLALDLVAEENRRVRDRYGPSGLFTGSYGWSSAGRLHHARSLVRRFYFGGGGGVDQLGNYSWGAAQFFLPYVIGTF TPLTGRVTSWPSVVEHCELFVAFGGLALKNAQVSSGGAAEHSLKPWLQKLVQKGTPVINISPMRDDCPAFVNAEWIPIRP NTDVALMLALAYEIQRRGAQDEAFLYSHCAGYDQLASYLRGTDDGVAKTPEWASAITGIPAARIGLLAQQLIGVRSFLTC SYSVQRAHRGEQPYWMMIALSAMLGQVGLPGGGFSFGHGSMNGVGNPRVDTPGPMMPVGPNPCGLAIPVARICDMLLQPG EPYQFRGETLHYPDIHLVHWAGGNPFHHHQQLNRLVEGWQKPDTVIVQDIWWTPAAKMADIVLPVTTSLERNDIGGSSRD RYVLAMHQAIAPQHQARNDFDIFADLAERLGYREQFTENRDERAWIESIYQQCGQAQAGTGVEWPEFEDFWRKGYVELPA PAKEFVFFDDFRADPQANPLQTPSGKIELFSEKIAGYGYADFAPHPQWQPPVEWLGAPQAKEWPLHLISIQPSDRLHSQM DPAPLAQGNKTAGRETLYMHPQDAIKRGIVDGVEVLVSNARGSCLAGVAITDGVTPGVVLMATGAWFDPGFGSQRLQVEQ SGNPNVLTLDIGTSPLTQGPNAMSCLVEVSVR >Mature_751_residues SIKRYPQLAHWGAYTAVVEDGRLIRCEPFAGDPDPSPMLDSIAPMAYSDKRIRKPAVRRSWLQKREGSDRTLRGREDFVE VDWDLALDLVAEENRRVRDRYGPSGLFTGSYGWSSAGRLHHARSLVRRFYFGGGGGVDQLGNYSWGAAQFFLPYVIGTFT PLTGRVTSWPSVVEHCELFVAFGGLALKNAQVSSGGAAEHSLKPWLQKLVQKGTPVINISPMRDDCPAFVNAEWIPIRPN TDVALMLALAYEIQRRGAQDEAFLYSHCAGYDQLASYLRGTDDGVAKTPEWASAITGIPAARIGLLAQQLIGVRSFLTCS YSVQRAHRGEQPYWMMIALSAMLGQVGLPGGGFSFGHGSMNGVGNPRVDTPGPMMPVGPNPCGLAIPVARICDMLLQPGE PYQFRGETLHYPDIHLVHWAGGNPFHHHQQLNRLVEGWQKPDTVIVQDIWWTPAAKMADIVLPVTTSLERNDIGGSSRDR YVLAMHQAIAPQHQARNDFDIFADLAERLGYREQFTENRDERAWIESIYQQCGQAQAGTGVEWPEFEDFWRKGYVELPAP AKEFVFFDDFRADPQANPLQTPSGKIELFSEKIAGYGYADFAPHPQWQPPVEWLGAPQAKEWPLHLISIQPSDRLHSQMD PAPLAQGNKTAGRETLYMHPQDAIKRGIVDGVEVLVSNARGSCLAGVAITDGVTPGVVLMATGAWFDPGFGSQRLQVEQS GNPNVLTLDIGTSPLTQGPNAMSCLVEVSVR
Specific function: This enzyme may serve as a scavenger, allowing the cell to utilize biotin sulfoxide as a biotin source. It reduces a spontaneous oxidation product of biotin, D-biotin D-sulfoxide (BSO or BDS), back to biotin [H]
COG id: COG0243
COG function: function code C; Anaerobic dehydrogenases, typically selenocysteine-containing
Gene ontology:
Cell location: Periplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prokaryotic molybdopterin-containing oxidoreductase family [H]
Homologues:
Organism=Escherichia coli, GI87081994, Length=761, Percent_Identity=40.0788436268068, Blast_Score=545, Evalue=1e-156, Organism=Escherichia coli, GI145693196, Length=760, Percent_Identity=40.2631578947368, Blast_Score=537, Evalue=1e-153, Organism=Escherichia coli, GI1787231, Length=764, Percent_Identity=41.3612565445026, Blast_Score=528, Evalue=1e-151, Organism=Escherichia coli, GI87081797, Length=735, Percent_Identity=31.156462585034, Blast_Score=290, Evalue=2e-79, Organism=Escherichia coli, GI1787870, Length=736, Percent_Identity=28.125, Blast_Score=252, Evalue=5e-68, Organism=Escherichia coli, GI171474008, Length=735, Percent_Identity=28.7074829931973, Blast_Score=240, Evalue=2e-64, Organism=Escherichia coli, GI3868721, Length=771, Percent_Identity=20.4928664072633, Blast_Score=105, Evalue=8e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009010 - InterPro: IPR006658 - InterPro: IPR006657 - InterPro: IPR006656 - InterPro: IPR006655 [H]
Pfam domain/function: PF00384 Molybdopterin; PF01568 Molydop_binding [H]
EC number: 1.7.2.3 [C]
Molecular weight: Translated: 83013; Mature: 82882
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: PS00490 MOLYBDOPTERIN_PROK_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIKRYPQLAHWGAYTAVVEDGRLIRCEPFAGDPDPSPMLDSIAPMAYSDKRIRKPAVRR CCCCCCCCHHHCCCEEEEECCCCEEEEECCCCCCCCCCHHHHHCCCCCCCHHHHCHHHHH SWLQKREGSDRTLRGREDFVEVDWDLALDLVAEENRRVRDRYGPSGLFTGSYGWSSAGRL HHHHHHCCCCCCCCCCCCEEEECHHHHHHHHHHCCHHHHHHCCCCCEEECCCCCCCCCHH HHARSLVRRFYFGGGGGVDQLGNYSWGAAQFFLPYVIGTFTPLTGRVTSWPSVVEHCELF HHHHHHHHHHHCCCCCCHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH VAFGGLALKNAQVSSGGAAEHSLKPWLQKLVQKGTPVINISPMRDDCPAFVNAEWIPIRP HHHCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCEEEECC NTDVALMLALAYEIQRRGAQDEAFLYSHCAGYDQLASYLRGTDDGVAKTPEWASAITGIP CCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHCCCCCCCCCCCHHHHHHCCCC AARIGLLAQQLIGVRSFLTCSYSVQRAHRGEQPYWMMIALSAMLGQVGLPGGGFSFGHGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCCCCCCCCCCCC MNGVGNPRVDTPGPMMPVGPNPCGLAIPVARICDMLLQPGEPYQFRGETLHYPDIHLVHW CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEECCCEECCCCEEEEEE AGGNPFHHHQQLNRLVEGWQKPDTVIVQDIWWTPAAKMADIVLPVTTSLERNDIGGSSRD CCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHEEEECCCCCCCCCCCCCCCC RYVLAMHQAIAPQHQARNDFDIFADLAERLGYREQFTENRDERAWIESIYQQCGQAQAGT CEEEEEHHHHCCHHHCCCCHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHCCCCCCC GVEWPEFEDFWRKGYVELPAPAKEFVFFDDFRADPQANPLQTPSGKIELFSEKIAGYGYA CCCCCCHHHHHHCCCEECCCCHHHEEEEECCCCCCCCCCCCCCCCCEEEEHHHHCCCCCC DFAPHPQWQPPVEWLGAPQAKEWPLHLISIQPSDRLHSQMDPAPLAQGNKTAGRETLYMH CCCCCCCCCCCHHHCCCCCCCCCCEEEEEECCCHHHHHCCCCCCCCCCCCCCCCCEEEEC PQDAIKRGIVDGVEVLVSNARGSCLAGVAITDGVTPGVVLMATGAWFDPGFGSQRLQVEQ CHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEEEEECCCCCCCCCCCEEEEEC SGNPNVLTLDIGTSPLTQGPNAMSCLVEVSVR CCCCCEEEEECCCCCCCCCCCCEEEEEEEECC >Mature Secondary Structure SIKRYPQLAHWGAYTAVVEDGRLIRCEPFAGDPDPSPMLDSIAPMAYSDKRIRKPAVRR CCCCCCCHHHCCCEEEEECCCCEEEEECCCCCCCCCCHHHHHCCCCCCCHHHHCHHHHH SWLQKREGSDRTLRGREDFVEVDWDLALDLVAEENRRVRDRYGPSGLFTGSYGWSSAGRL HHHHHHCCCCCCCCCCCCEEEECHHHHHHHHHHCCHHHHHHCCCCCEEECCCCCCCCCHH HHARSLVRRFYFGGGGGVDQLGNYSWGAAQFFLPYVIGTFTPLTGRVTSWPSVVEHCELF HHHHHHHHHHHCCCCCCHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH VAFGGLALKNAQVSSGGAAEHSLKPWLQKLVQKGTPVINISPMRDDCPAFVNAEWIPIRP HHHCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCEEEECC NTDVALMLALAYEIQRRGAQDEAFLYSHCAGYDQLASYLRGTDDGVAKTPEWASAITGIP CCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHCCCCCCCCCCCHHHHHHCCCC AARIGLLAQQLIGVRSFLTCSYSVQRAHRGEQPYWMMIALSAMLGQVGLPGGGFSFGHGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCCCCCCCCCCCC MNGVGNPRVDTPGPMMPVGPNPCGLAIPVARICDMLLQPGEPYQFRGETLHYPDIHLVHW CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEECCCEECCCCEEEEEE AGGNPFHHHQQLNRLVEGWQKPDTVIVQDIWWTPAAKMADIVLPVTTSLERNDIGGSSRD CCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHEEEECCCCCCCCCCCCCCCC RYVLAMHQAIAPQHQARNDFDIFADLAERLGYREQFTENRDERAWIESIYQQCGQAQAGT CEEEEEHHHHCCHHHCCCCHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHCCCCCCC GVEWPEFEDFWRKGYVELPAPAKEFVFFDDFRADPQANPLQTPSGKIELFSEKIAGYGYA CCCCCCHHHHHHCCCEECCCCHHHEEEEECCCCCCCCCCCCCCCCCEEEEHHHHCCCCCC DFAPHPQWQPPVEWLGAPQAKEWPLHLISIQPSDRLHSQMDPAPLAQGNKTAGRETLYMH CCCCCCCCCCCHHHCCCCCCCCCCEEEEEECCCHHHHHCCCCCCCCCCCCCCCCCEEEEC PQDAIKRGIVDGVEVLVSNARGSCLAGVAITDGVTPGVVLMATGAWFDPGFGSQRLQVEQ CHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEEEEECCCCCCCCCCCEEEEEC SGNPNVLTLDIGTSPLTQGPNAMSCLVEVSVR CCCCCEEEEECCCCCCCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: A Spontaneous Oxidation Product Of Biotin, D-Biotin D-Sulfoxide (Bso Or Bds) [C]
Specific reaction: Reduces A Spontaneous Oxidation Product Of Biotin, D-Biotin D-Sulfoxide (Bso Or Bds), Back To Biotin. [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7733660 [H]