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The map label for this gene is ppdA [H]

Identifier: 157372055

GI number: 157372055

Start: 4227308

End: 4227817

Strand: Reverse

Name: ppdA [H]

Synonym: Spro_3820

Alternate gene names: 157372055

Gene position: 4227817-4227308 (Counterclockwise)

Preceding gene: 157372056

Following gene: 157372054

Centisome position: 77.59

GC content: 58.43

Gene sequence:

>510_bases
ATGAACGACAAGATGATTTTCAATAATATTGATGGCCAGCGCGGGATGACGCTGATTGAGCTGCTGGTGGTGATTACCCT
GGCAGGCCTGCTGACCGGCTGGGGGGTTAGCCACTGGCGTCATTATCAACAGGCCCTGCGGCTGGAACATACCGCGCAGC
AACTGTTGGCATTTCTCACCCGGTTACAGGCAGACGCCAACTGGCGCAACCGCACGGCACTGCTGGGGTTTAAAACCGGC
GATCCCTGGTGCATCGGCAGCGGCCAATCGCCAATGGATTGCGCAGCGCTCGGCGATGATGTGTTCAGCCCCGGCTATCG
GGACGTGCAACTGGCGGGGTTTACTCAAAAGGATATGGGGTTCTATGGCCTGCGTAACAATGCACAGGCCGGGCATATCT
TGCTCAGCAATGGCGCTGGCCGCCTGCGGTTGGTGCTGTCTGCCAAGGGGCGGCTACGGTTATGCAGTGAAGGCGCGAGC
ATAAGAGGGATTACGACATGCCAGCTCTAG

Upstream 100 bases:

>100_bases
ATTGGTTTCTCCCGTCAGTTTCATAGAAAGGTTGCGCAGCACGCTTCAGGTCGGATAACGCCGTCTTTATCCTGCTGTGC
TCCTGGTTACACTGGCCGCC

Downstream 100 bases:

>100_bases
CGCGCGGTTTTACCTTGCCGGAGGTGATGCTGGCGCTGACGTTTGGCAGCCTGATTGCGTTGGCGGCGGCTAAAACTTAT
CCGGTCTTGCGTCAGCACAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MNDKMIFNNIDGQRGMTLIELLVVITLAGLLTGWGVSHWRHYQQALRLEHTAQQLLAFLTRLQADANWRNRTALLGFKTG
DPWCIGSGQSPMDCAALGDDVFSPGYRDVQLAGFTQKDMGFYGLRNNAQAGHILLSNGAGRLRLVLSAKGRLRLCSEGAS
IRGITTCQL

Sequences:

>Translated_169_residues
MNDKMIFNNIDGQRGMTLIELLVVITLAGLLTGWGVSHWRHYQQALRLEHTAQQLLAFLTRLQADANWRNRTALLGFKTG
DPWCIGSGQSPMDCAALGDDVFSPGYRDVQLAGFTQKDMGFYGLRNNAQAGHILLSNGAGRLRLVLSAKGRLRLCSEGAS
IRGITTCQL
>Mature_169_residues
MNDKMIFNNIDGQRGMTLIELLVVITLAGLLTGWGVSHWRHYQQALRLEHTAQQLLAFLTRLQADANWRNRTALLGFKTG
DPWCIGSGQSPMDCAALGDDVFSPGYRDVQLAGFTQKDMGFYGLRNNAQAGHILLSNGAGRLRLVLSAKGRLRLCSEGAS
IRGITTCQL

Specific function: Not yet known [H]

COG id: COG2165

COG function: function code NU; Type II secretory pathway, pseudopilin PulG

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789190, Length=153, Percent_Identity=38.562091503268, Blast_Score=104, Evalue=3e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012902
- InterPro:   IPR001120 [H]

Pfam domain/function: PF07963 N_methyl [H]

EC number: NA

Molecular weight: Translated: 18577; Mature: 18577

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDKMIFNNIDGQRGMTLIELLVVITLAGLLTGWGVSHWRHYQQALRLEHTAQQLLAFLT
CCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RLQADANWRNRTALLGFKTGDPWCIGSGQSPMDCAALGDDVFSPGYRDVQLAGFTQKDMG
HHHCCCCCCCCEEEEEEECCCCEEECCCCCCCHHHHHCCHHCCCCCCEEEEECCCCCCCC
FYGLRNNAQAGHILLSNGAGRLRLVLSAKGRLRLCSEGASIRGITTCQL
EEECCCCCCCCEEEEECCCCEEEEEEECCCCEEEECCCCCCCCEEEECC
>Mature Secondary Structure
MNDKMIFNNIDGQRGMTLIELLVVITLAGLLTGWGVSHWRHYQQALRLEHTAQQLLAFLT
CCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RLQADANWRNRTALLGFKTGDPWCIGSGQSPMDCAALGDDVFSPGYRDVQLAGFTQKDMG
HHHCCCCCCCCEEEEEEECCCCEEECCCCCCCHHHHHCCHHCCCCCCEEEEECCCCCCCC
FYGLRNNAQAGHILLSNGAGRLRLVLSAKGRLRLCSEGASIRGITTCQL
EEECCCCCCCCEEEEECCCCEEEEEEECCCCEEEECCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3520484; 9278503; 7934814 [H]