| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is yaeT
Identifier: 157372017
GI number: 157372017
Start: 4180355
End: 4182760
Strand: Reverse
Name: yaeT
Synonym: Spro_3782
Alternate gene names: 157372017
Gene position: 4182760-4180355 (Counterclockwise)
Preceding gene: 157372018
Following gene: 157372016
Centisome position: 76.76
GC content: 53.08
Gene sequence:
>2406_bases ATGGCGATGAAAAAGTTGCTCATAGCGTCGCTGCTGTTTGGCAGCGCCACCGTATACGGTGCAGACGGGTTCGTAGTGAA GGATATTCATTTCGAAGGCCTGCAGCGAGTCGCCGTCGGTGCGGCGTTACTCAACATGCCGGTTCGCGTAGGCGATACCG TCACTGACGATGATATCAGTAATACCATCCGTGCCTTGTTTGCCACTGGCAACTTCGAGGACGTTCGCGTGCTGCGCGAT GGTAATACGCTGATTGTTCAGGTTAAGGAACGCCCTACCATTGCCAGCATCACTTTCTCCGGCAACAAGTCGGTGAAAGA TGACATGCTCAAGCAAAACCTGGAAGCCTCTGGCGTTCGGGTTGGCGAAGCGCTCGACCGCACCACGATATCCAGCATTG AAAAAGGGCTGGAAGACTTCTATTACAGCGTCGGTAAATACAGTGCCTCGGTGAAAGCCGTGGTCACGCCATTGCCGCGT AACCGTGTTGACCTGAAACTGGTGTTCACGGAAGGGGTTTCCGCCAAGATTCAACAAATCAACATTGTCGGCAATCATGC CTTCACCAATGATGAACTGATTTCACGCTTCCAACTGCGTGATGAAGTGCCGTGGTGGAACGTGGTTGGCGATCGCAAAT ACCAGAAGCAAAAGCTGGCGGGTGACCTCGAAACCCTGCGCAGTTTCTATCTGGACCGCGGCTACGCGCGCTTTAATATT GATTCGACTCAGGTCAGCCTGACGCCGGACAAAAAAGGCATCTACATCACCATCAATATCACTGAAGGCGAGCAGTACAA GCTCACCGACGTGGTGGTGAACGGCAATCTGGCCGGCCACTCGGCGGAAGTCGCCCAGTTGACCAAGATTGAGCCAGGTG AGCTGTATAACGGCAGTAAAGTAACCAAAATGGAAGACAACATCAAAACGATGTTGGGCCGTTACGGTTACGCTTACCCG CGTGTTTCTACCCAGCCTGAAATCAACGACGCGGATAAAACCGTGAAGCTGCACGTGAATATTGATGCGGGTAACCGTTT CTATGTCCGTCGCATCAAGTTTGAAGGCAACGACACCAGTAAAGATTCCGTACTGCGCCGTGAAATGCGTCAGATGGAAG GTGCGTGGCTGGGCAATGCACAGGTAGAGCAGGGCAAAGAACGTCTGAACCGTTTGGGCTATTTTGAAACGGTAGATGTG GAAACCCAGCGCGTGCCAGGTACTGCAGATCAGGTTGATGTCACCTATAAGGTGAAAGAGCGTAACACCGGTACCTTCAA CTTCGGCGTTGGCTACGGCACCGAGAGCGGCGTGAGCTTCCAGGCGGGCGTTCAGCAGGACAACTGGCTGGGGACCGGCT ATTCCGTCGGCATCAGCGGTACCAAGAACGATTACCAGACCTACACCGAGCTGTCGGTAACCAACCCGTACTTCACCGTT GACGGTGTGAGTTTGGGCGGCCGTATCTTCTACAACGACTTTAAAGCCGATGACGCGGACCTGTCCGACTATACCAACAA GAGTTACGGTATAGACGGTACCCTGGGCTTCCCGATCAACGAAAACAACTCGTTGCGTACCGGCCTGGGTTACGTGCATA ACGGCTTGTCCAACATGCAGCCGCAGATTGCCATGTGGCGTTATCTGGACTCGATGGGTCTGAACCCTAACACCACCGAT CGCGCCAGCTATTCTGCCGATGACTTCACGCTGAACCTGGGTTGGACCTATAACAACCTTGACCGTGGCTATTTCCCAAC CTCGGGTAACCGCACTACGCTCAATGGTAAAGTCACCATTCCAGGCTCGGATAACGAATACTACAAGTTGACGTTAGACA GCGTGCAGTATGTTCCGATCAATGATGACCGCACCTGGGTGCTGTTGGGTCGTGGCCGTCTGGGTTATGCAGATGGTCTG GGCGGCAAAGAAATGCCGTTCTACGAAAACTTCTATGCCGGTGGTTCCAGCACCGTGCGTGGTTTCGGCTCCAACACCAT CGGTCCAAAAGCGGCATACTACAACTCCAATTCGTATGGCTGTAGTAACGGTACCCCGATTTGTAATTCGGACGACGCAG TGGGCGGTAACGCCATGGCTGTCGCCAGTATGGAGCTGATCACACCAACGCCATTCATCAGTGAGAAATACGCCAACTCG GTGCGTACTTCACTGTTCATGGATGCGGGTACCGTGTGGGATACCAACTGGCAGAATACTGCGCAGACCAGCATGTATGA TATTCCGGACTACAGTAAGGCGAGCAACATCCGCGTTTCTGCCGGTATCGCCTTGCAGTGGATGTCACCTTTGGGTCCGT TGGTGTTCTCTTATGCCAACCCGATCAAGAAATACGAAGGCGACAAGTCCGAACAGTTCCAGTTTAACATTGGCAAGACC TGGTAA
Upstream 100 bases:
>100_bases TAGGTTCGATCGTGTTGGTGCTTTTAATGGGTCTTGCACTTTTCAATGATTTTTCTCGTCTTTAGGGGCGGGGATAGGTT AGGAAGAACGCATAACAACG
Downstream 100 bases:
>100_bases CAGGTCCGGCTTCTGGGCATAGCAGTTATTAAGAATCGCAAATGCCAGGCGCCCGTCCGAGCACAGAGAGATGATTCTCA TTGTTTTGCGGGATAAGTCT
Product: outer membrane protein assembly factor YaeT
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 801; Mature: 800
Protein sequence:
>801_residues MAMKKLLIASLLFGSATVYGADGFVVKDIHFEGLQRVAVGAALLNMPVRVGDTVTDDDISNTIRALFATGNFEDVRVLRD GNTLIVQVKERPTIASITFSGNKSVKDDMLKQNLEASGVRVGEALDRTTISSIEKGLEDFYYSVGKYSASVKAVVTPLPR NRVDLKLVFTEGVSAKIQQINIVGNHAFTNDELISRFQLRDEVPWWNVVGDRKYQKQKLAGDLETLRSFYLDRGYARFNI DSTQVSLTPDKKGIYITINITEGEQYKLTDVVVNGNLAGHSAEVAQLTKIEPGELYNGSKVTKMEDNIKTMLGRYGYAYP RVSTQPEINDADKTVKLHVNIDAGNRFYVRRIKFEGNDTSKDSVLRREMRQMEGAWLGNAQVEQGKERLNRLGYFETVDV ETQRVPGTADQVDVTYKVKERNTGTFNFGVGYGTESGVSFQAGVQQDNWLGTGYSVGISGTKNDYQTYTELSVTNPYFTV DGVSLGGRIFYNDFKADDADLSDYTNKSYGIDGTLGFPINENNSLRTGLGYVHNGLSNMQPQIAMWRYLDSMGLNPNTTD RASYSADDFTLNLGWTYNNLDRGYFPTSGNRTTLNGKVTIPGSDNEYYKLTLDSVQYVPINDDRTWVLLGRGRLGYADGL GGKEMPFYENFYAGGSSTVRGFGSNTIGPKAAYYNSNSYGCSNGTPICNSDDAVGGNAMAVASMELITPTPFISEKYANS VRTSLFMDAGTVWDTNWQNTAQTSMYDIPDYSKASNIRVSAGIALQWMSPLGPLVFSYANPIKKYEGDKSEQFQFNIGKT W
Sequences:
>Translated_801_residues MAMKKLLIASLLFGSATVYGADGFVVKDIHFEGLQRVAVGAALLNMPVRVGDTVTDDDISNTIRALFATGNFEDVRVLRD GNTLIVQVKERPTIASITFSGNKSVKDDMLKQNLEASGVRVGEALDRTTISSIEKGLEDFYYSVGKYSASVKAVVTPLPR NRVDLKLVFTEGVSAKIQQINIVGNHAFTNDELISRFQLRDEVPWWNVVGDRKYQKQKLAGDLETLRSFYLDRGYARFNI DSTQVSLTPDKKGIYITINITEGEQYKLTDVVVNGNLAGHSAEVAQLTKIEPGELYNGSKVTKMEDNIKTMLGRYGYAYP RVSTQPEINDADKTVKLHVNIDAGNRFYVRRIKFEGNDTSKDSVLRREMRQMEGAWLGNAQVEQGKERLNRLGYFETVDV ETQRVPGTADQVDVTYKVKERNTGTFNFGVGYGTESGVSFQAGVQQDNWLGTGYSVGISGTKNDYQTYTELSVTNPYFTV DGVSLGGRIFYNDFKADDADLSDYTNKSYGIDGTLGFPINENNSLRTGLGYVHNGLSNMQPQIAMWRYLDSMGLNPNTTD RASYSADDFTLNLGWTYNNLDRGYFPTSGNRTTLNGKVTIPGSDNEYYKLTLDSVQYVPINDDRTWVLLGRGRLGYADGL GGKEMPFYENFYAGGSSTVRGFGSNTIGPKAAYYNSNSYGCSNGTPICNSDDAVGGNAMAVASMELITPTPFISEKYANS VRTSLFMDAGTVWDTNWQNTAQTSMYDIPDYSKASNIRVSAGIALQWMSPLGPLVFSYANPIKKYEGDKSEQFQFNIGKT W >Mature_800_residues AMKKLLIASLLFGSATVYGADGFVVKDIHFEGLQRVAVGAALLNMPVRVGDTVTDDDISNTIRALFATGNFEDVRVLRDG NTLIVQVKERPTIASITFSGNKSVKDDMLKQNLEASGVRVGEALDRTTISSIEKGLEDFYYSVGKYSASVKAVVTPLPRN RVDLKLVFTEGVSAKIQQINIVGNHAFTNDELISRFQLRDEVPWWNVVGDRKYQKQKLAGDLETLRSFYLDRGYARFNID STQVSLTPDKKGIYITINITEGEQYKLTDVVVNGNLAGHSAEVAQLTKIEPGELYNGSKVTKMEDNIKTMLGRYGYAYPR VSTQPEINDADKTVKLHVNIDAGNRFYVRRIKFEGNDTSKDSVLRREMRQMEGAWLGNAQVEQGKERLNRLGYFETVDVE TQRVPGTADQVDVTYKVKERNTGTFNFGVGYGTESGVSFQAGVQQDNWLGTGYSVGISGTKNDYQTYTELSVTNPYFTVD GVSLGGRIFYNDFKADDADLSDYTNKSYGIDGTLGFPINENNSLRTGLGYVHNGLSNMQPQIAMWRYLDSMGLNPNTTDR ASYSADDFTLNLGWTYNNLDRGYFPTSGNRTTLNGKVTIPGSDNEYYKLTLDSVQYVPINDDRTWVLLGRGRLGYADGLG GKEMPFYENFYAGGSSTVRGFGSNTIGPKAAYYNSNSYGCSNGTPICNSDDAVGGNAMAVASMELITPTPFISEKYANSV RTSLFMDAGTVWDTNWQNTAQTSMYDIPDYSKASNIRVSAGIALQWMSPLGPLVFSYANPIKKYEGDKSEQFQFNIGKTW
Specific function: Involved in the assembly of outer membrane proteins. Does not play a direct role in the export of outer membrane lipids
COG id: COG4775
COG function: function code M; Outer membrane protein/protective antigen OMA87
Gene ontology:
Cell location: Cell outer membrane
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the surface antigen D15 family
Homologues:
Organism=Escherichia coli, GI1786374, Length=813, Percent_Identity=83.1488314883149, Blast_Score=1388, Evalue=0.0,
Paralogues:
None
Copy number: 180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 220 Molecules/Cell In: Stationary Phase, Ri
Swissprot (AC and ID): YAET_SERP5 (A8GID8)
Other databases:
- EMBL: CP000826 - RefSeq: YP_001480006.1 - ProteinModelPortal: A8GID8 - SMR: A8GID8 - STRING: A8GID8 - GeneID: 5607329 - GenomeReviews: CP000826_GR - KEGG: spe:Spro_3782 - eggNOG: COG4775 - HOGENOM: HBG482361 - OMA: GVTWYSP - ProtClustDB: PRK11067 - BioCyc: SPRO399741:SPRO_3782-MONOMER - HAMAP: MF_01430 - InterPro: IPR000184 - InterPro: IPR016474 - InterPro: IPR010827 - PANTHER: PTHR12815 - PIRSF: PIRSF006076 - TIGRFAMs: TIGR03303
Pfam domain/function: PF01103 Bac_surface_Ag; PF07244 Surf_Ag_VNR
EC number: NA
Molecular weight: Translated: 88726; Mature: 88595
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMKKLLIASLLFGSATVYGADGFVVKDIHFEGLQRVAVGAALLNMPVRVGDTVTDDDIS CCHHHHHHHHHHHCCEEEEECCCEEEEEECHHHHHHHHHHHHHHCCCEECCCCCCCHHHH NTIRALFATGNFEDVRVLRDGNTLIVQVKERPTIASITFSGNKSVKDDMLKQNLEASGVR HHHHEEEECCCCCEEEEEECCCEEEEEEECCCCEEEEEECCCCCHHHHHHHCCCCCCCEE VGEALDRTTISSIEKGLEDFYYSVGKYSASVKAVVTPLPRNRVDLKLVFTEGVSAKIQQI HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEEECCCCCEEEEE NIVGNHAFTNDELISRFQLRDEVPWWNVVGDRKYQKQKLAGDLETLRSFYLDRGYARFNI EEEECCCCCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEE DSTQVSLTPDKKGIYITINITEGEQYKLTDVVVNGNLAGHSAEVAQLTKIEPGELYNGSK CCCEEEECCCCCCEEEEEEECCCCCEEEEEEEEECCCCCCCCHHHHEEECCCCCCCCCCE VTKMEDNIKTMLGRYGYAYPRVSTQPEINDADKTVKLHVNIDAGNRFYVRRIKFEGNDTS EEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEEEECCCCCC KDSVLRREMRQMEGAWLGNAQVEQGKERLNRLGYFETVDVETQRVPGTADQVDVTYKVKE HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCEEEEEEEEC RNTGTFNFGVGYGTESGVSFQAGVQQDNWLGTGYSVGISGTKNDYQTYTELSVTNPYFTV CCCCEEEEEECCCCCCCCEEEECCCCCCEECCCEEEECCCCCCCCCEEEEEEECCCEEEE DGVSLGGRIFYNDFKADDADLSDYTNKSYGIDGTLGFPINENNSLRTGLGYVHNGLSNMQ ECCEECCEEEEECCCCCCCCHHHCCCCCCCCCCEEECCCCCCCCCCCCHHHHHCCCCCCC PQIAMWRYLDSMGLNPNTTDRASYSADDFTLNLGWTYNNLDRGYFPTSGNRTTLNGKVTI CHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCEEEEEEEEEE PGSDNEYYKLTLDSVQYVPINDDRTWVLLGRGRLGYADGLGGKEMPFYENFYAGGSSTVR CCCCCCEEEEEECCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHEECCCCCEEE GFGSNTIGPKAAYYNSNSYGCSNGTPICNSDDAVGGNAMAVASMELITPTPFISEKYANS ECCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHH VRTSLFMDAGTVWDTNWQNTAQTSMYDIPDYSKASNIRVSAGIALQWMSPLGPLVFSYAN HHHHEEEECCCEECCCCCCCCCCCEECCCCCCCCCCEEEECCEEEEECCCHHHHHHHHHC PIKKYEGDKSEQFQFNIGKTW HHHHHCCCCCCEEEEECCCCC >Mature Secondary Structure AMKKLLIASLLFGSATVYGADGFVVKDIHFEGLQRVAVGAALLNMPVRVGDTVTDDDIS CHHHHHHHHHHHCCEEEEECCCEEEEEECHHHHHHHHHHHHHHCCCEECCCCCCCHHHH NTIRALFATGNFEDVRVLRDGNTLIVQVKERPTIASITFSGNKSVKDDMLKQNLEASGVR HHHHEEEECCCCCEEEEEECCCEEEEEEECCCCEEEEEECCCCCHHHHHHHCCCCCCCEE VGEALDRTTISSIEKGLEDFYYSVGKYSASVKAVVTPLPRNRVDLKLVFTEGVSAKIQQI HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEEECCCCCEEEEE NIVGNHAFTNDELISRFQLRDEVPWWNVVGDRKYQKQKLAGDLETLRSFYLDRGYARFNI EEEECCCCCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEE DSTQVSLTPDKKGIYITINITEGEQYKLTDVVVNGNLAGHSAEVAQLTKIEPGELYNGSK CCCEEEECCCCCCEEEEEEECCCCCEEEEEEEEECCCCCCCCHHHHEEECCCCCCCCCCE VTKMEDNIKTMLGRYGYAYPRVSTQPEINDADKTVKLHVNIDAGNRFYVRRIKFEGNDTS EEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEEEECCCCCC KDSVLRREMRQMEGAWLGNAQVEQGKERLNRLGYFETVDVETQRVPGTADQVDVTYKVKE HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCEEEEEEEEC RNTGTFNFGVGYGTESGVSFQAGVQQDNWLGTGYSVGISGTKNDYQTYTELSVTNPYFTV CCCCEEEEEECCCCCCCCEEEECCCCCCEECCCEEEECCCCCCCCCEEEEEEECCCEEEE DGVSLGGRIFYNDFKADDADLSDYTNKSYGIDGTLGFPINENNSLRTGLGYVHNGLSNMQ ECCEECCEEEEECCCCCCCCHHHCCCCCCCCCCEEECCCCCCCCCCCCHHHHHCCCCCCC PQIAMWRYLDSMGLNPNTTDRASYSADDFTLNLGWTYNNLDRGYFPTSGNRTTLNGKVTI CHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCEEEEEEEEEE PGSDNEYYKLTLDSVQYVPINDDRTWVLLGRGRLGYADGLGGKEMPFYENFYAGGSSTVR CCCCCCEEEEEECCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHEECCCCCEEE GFGSNTIGPKAAYYNSNSYGCSNGTPICNSDDAVGGNAMAVASMELITPTPFISEKYANS ECCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHH VRTSLFMDAGTVWDTNWQNTAQTSMYDIPDYSKASNIRVSAGIALQWMSPLGPLVFSYAN HHHHEEEECCCEECCCCCCCCCCCEECCCCCCCCCCEEEECCEEEEECCCHHHHHHHHHC PIKKYEGDKSEQFQFNIGKTW HHHHHCCCCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA