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The map label for this gene is yfiC [C]

Identifier: 157371913

GI number: 157371913

Start: 4070998

End: 4071780

Strand: Reverse

Name: yfiC [C]

Synonym: Spro_3678

Alternate gene names: 157371913

Gene position: 4071780-4070998 (Counterclockwise)

Preceding gene: 157371915

Following gene: 157371911

Centisome position: 74.73

GC content: 56.07

Gene sequence:

>783_bases
ATGCTACGCCAGTTTTGTATTCAGGTGGTTATTGTGAGCACTCAATCGAAAGCGAATTTTACTCCGCGTCGCGGCGGTTT
TACCTTTAAGCAATTTTTTGTTGCTCACGATCGCTGTGCAATGAAAGTGGGTACCGACGGCGTGCTGCTCGGTGCATGGG
CTCCCCTGGCACAGGCACAACGGGTGCTGGATATCGGCAGCGGCAGCGGATTGATCGCGCTGATGCTCGCGCAGCGTACC
GCCGAGAACGTGCAGATTGACGCTGTAGAGCTCGATGAAGCCGCCGCTGCACAGGCGCATGACAATGTGCTGGAATCCCC
TTGGTCGCTGCGCATTCAGGTGCATGCGCAGGATATCCACCATTTTGCCCAACATCATGCCGGTCAATATGACCTGATCG
TCAGCAACCCGCCGTATTTCGAGCCTGCGGTCGCCTGTCGCGACCAGGCGCGCCATAACGCCCGTTACACCGAAACCCTG
ACCCACGATGCCCTGCTGGCCAGTGCGGAACAGCTAATCGTACCGCAGGGAACCTTTTGCGTAGTACTGCCGCATGACAT
TGGTGAAGCTTTCGAAACTAATGCACATCGCCGTGGCTGGCATACTGCGCAGCGGCTGAATGTCAGCGATCGCGCGGATA
CGCCGATGCACCGGGTATTGTTAGCCCTGACGCGTCAGCCTGCGGAAGAGGCAACCGAGCAGAAGCTGGCGATTAAGTTG
GCCGATGGCAGTTACACCGATGATTTTCGCCGTCTGATTACTGATTTCTATTTGTTTTACTGA

Upstream 100 bases:

>100_bases
TGGTCTACCTCTACTTGGGGCGCCGATTATAGACGGGTTGGCCGCGTTCTTCACCTATTTAAGCGGAAAGCATCTCTTTT
CCCAAAAATCAGATTGCCTT

Downstream 100 bases:

>100_bases
AATGAAAAGGGCGCCATGGTCAGGCGCCCAGGCGGCATCATTAGGGCTGCAGAATGGTCGGCAGCGCTTGCGGCAGCAGA
TCCGGATAGTCCAGCGTATA

Product: methyltransferase small

Products: NA

Alternate protein names: tRNA m6A37 methyltransferase

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MLRQFCIQVVIVSTQSKANFTPRRGGFTFKQFFVAHDRCAMKVGTDGVLLGAWAPLAQAQRVLDIGSGSGLIALMLAQRT
AENVQIDAVELDEAAAAQAHDNVLESPWSLRIQVHAQDIHHFAQHHAGQYDLIVSNPPYFEPAVACRDQARHNARYTETL
THDALLASAEQLIVPQGTFCVVLPHDIGEAFETNAHRRGWHTAQRLNVSDRADTPMHRVLLALTRQPAEEATEQKLAIKL
ADGSYTDDFRRLITDFYLFY

Sequences:

>Translated_260_residues
MLRQFCIQVVIVSTQSKANFTPRRGGFTFKQFFVAHDRCAMKVGTDGVLLGAWAPLAQAQRVLDIGSGSGLIALMLAQRT
AENVQIDAVELDEAAAAQAHDNVLESPWSLRIQVHAQDIHHFAQHHAGQYDLIVSNPPYFEPAVACRDQARHNARYTETL
THDALLASAEQLIVPQGTFCVVLPHDIGEAFETNAHRRGWHTAQRLNVSDRADTPMHRVLLALTRQPAEEATEQKLAIKL
ADGSYTDDFRRLITDFYLFY
>Mature_260_residues
MLRQFCIQVVIVSTQSKANFTPRRGGFTFKQFFVAHDRCAMKVGTDGVLLGAWAPLAQAQRVLDIGSGSGLIALMLAQRT
AENVQIDAVELDEAAAAQAHDNVLESPWSLRIQVHAQDIHHFAQHHAGQYDLIVSNPPYFEPAVACRDQARHNARYTETL
THDALLASAEQLIVPQGTFCVVLPHDIGEAFETNAHRRGWHTAQRLNVSDRADTPMHRVLLALTRQPAEEATEQKLAIKL
ADGSYTDDFRRLITDFYLFY

Specific function: Specifically methylates the adenine in position 37 of tRNA(Val)

COG id: COG4123

COG function: function code R; Predicted O-methyltransferase

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. tRNA (adenine-N(6)-)-methyltransferase family

Homologues:

Organism=Escherichia coli, GI87082131, Length=244, Percent_Identity=52.4590163934426, Blast_Score=257, Evalue=6e-70,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): TRMN6_SERP5 (A8GI34)

Other databases:

- EMBL:   CP000826
- RefSeq:   YP_001479902.1
- ProteinModelPortal:   A8GI34
- STRING:   A8GI34
- GeneID:   5606710
- GenomeReviews:   CP000826_GR
- KEGG:   spe:Spro_3678
- eggNOG:   COG4123
- HOGENOM:   HBG307609
- OMA:   FKQFHIN
- BioCyc:   SPRO399741:SPRO_3678-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01872
- InterPro:   IPR002052
- InterPro:   IPR007848
- InterPro:   IPR022882

Pfam domain/function: PF05175 MTS

EC number: =2.1.1.55

Molecular weight: Translated: 29041; Mature: 29041

Theoretical pI: Translated: 6.57; Mature: 6.57

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRQFCIQVVIVSTQSKANFTPRRGGFTFKQFFVAHDRCAMKVGTDGVLLGAWAPLAQAQ
CHHHHEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHEEEEECCCCEEEECCCCHHHHH
RVLDIGSGSGLIALMLAQRTAENVQIDAVELDEAAAAQAHDNVLESPWSLRIQVHAQDIH
HHEECCCCCCHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHCCCEEEEEEEEHHHHH
HFAQHHAGQYDLIVSNPPYFEPAVACRDQARHNARYTETLTHDALLASAEQLIVPQGTFC
HHHHHCCCCEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEECCCCEE
VVLPHDIGEAFETNAHRRGWHTAQRLNVSDRADTPMHRVLLALTRQPAEEATEQKLAIKL
EEECCCCCHHHHCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHEEEEEE
ADGSYTDDFRRLITDFYLFY
CCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MLRQFCIQVVIVSTQSKANFTPRRGGFTFKQFFVAHDRCAMKVGTDGVLLGAWAPLAQAQ
CHHHHEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHEEEEECCCCEEEECCCCHHHHH
RVLDIGSGSGLIALMLAQRTAENVQIDAVELDEAAAAQAHDNVLESPWSLRIQVHAQDIH
HHEECCCCCCHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHCCCEEEEEEEEHHHHH
HFAQHHAGQYDLIVSNPPYFEPAVACRDQARHNARYTETLTHDALLASAEQLIVPQGTFC
HHHHHCCCCEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEECCCCEE
VVLPHDIGEAFETNAHRRGWHTAQRLNVSDRADTPMHRVLLALTRQPAEEATEQKLAIKL
EEECCCCCHHHHCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHEEEEEE
ADGSYTDDFRRLITDFYLFY
CCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA