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The map label for this gene is 157371793

Identifier: 157371793

GI number: 157371793

Start: 3935275

End: 3935661

Strand: Reverse

Name: 157371793

Synonym: Spro_3558

Alternate gene names: NA

Gene position: 3935661-3935275 (Counterclockwise)

Preceding gene: 157371794

Following gene: 157371786

Centisome position: 72.23

GC content: 55.81

Gene sequence:

>387_bases
ATGTATATGTTTGATACCAATACGGTCAGCCAGCTCTTTCGTCGGCACCCTCGTCTGCTCGGCTTAATGGAAAAGATCCC
GCCTTCTGCGGTCTGCATTTCCAGTATTACCGAGGCTGAATTGCTCTATGGCGTCGCCAAACGGCAGAGTCTGACGCTGA
AAGCGACGGTTGCGGCATTCCTTGATTCCGTGACGGTCTATGCCTGGGACAGTGAAGCCGCGCATTGCTATGGCGCTATG
CGGGCGGAGATGACAAAAAACGGGCGGGTGATGGGGGCTTTGGATCAGCTTATTGCCGCACACGCCCAGAGCCGCGGTGC
GACGATTGTGACTAACGATAAGGCGTTCGCCATGGTGCCAGGGCTGGCAGTGGAAGACTGGACTTAA

Upstream 100 bases:

>100_bases
AAATGATCGCACAAACGCAGGTACCGCAGGACTTCCTGACCGCGGAGGATCGTCAGCAGGGGATGGCCACCCGCGATCCC
TTTGCCGGGGAAGAATAAGC

Downstream 100 bases:

>100_bases
AGCCCATTCACCAGCCGGCAAGGCTCGGCTTCCCAGCGATAGCCCACGCCGTACACCGAACGGATAAAGGACTTCTCGCC
GTCGATCAGTTCCAGCTTGC

Product: PilT domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 128; Mature: 128

Protein sequence:

>128_residues
MYMFDTNTVSQLFRRHPRLLGLMEKIPPSAVCISSITEAELLYGVAKRQSLTLKATVAAFLDSVTVYAWDSEAAHCYGAM
RAEMTKNGRVMGALDQLIAAHAQSRGATIVTNDKAFAMVPGLAVEDWT

Sequences:

>Translated_128_residues
MYMFDTNTVSQLFRRHPRLLGLMEKIPPSAVCISSITEAELLYGVAKRQSLTLKATVAAFLDSVTVYAWDSEAAHCYGAM
RAEMTKNGRVMGALDQLIAAHAQSRGATIVTNDKAFAMVPGLAVEDWT
>Mature_128_residues
MYMFDTNTVSQLFRRHPRLLGLMEKIPPSAVCISSITEAELLYGVAKRQSLTLKATVAAFLDSVTVYAWDSEAAHCYGAM
RAEMTKNGRVMGALDQLIAAHAQSRGATIVTNDKAFAMVPGLAVEDWT

Specific function: Unknown

COG id: COG1487

COG function: function code R; Predicted nucleic acid-binding protein, contains PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.nodosus virulence-associated protein C (vapC) [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002716
- InterPro:   IPR006596 [H]

Pfam domain/function: PF01850 PIN [H]

EC number: NA

Molecular weight: Translated: 13983; Mature: 13983

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYMFDTNTVSQLFRRHPRLLGLMEKIPPSAVCISSITEAELLYGVAKRQSLTLKATVAAF
CEEECCHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
LDSVTVYAWDSEAAHCYGAMRAEMTKNGRVMGALDQLIAAHAQSRGATIVTNDKAFAMVP
HHCEEEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEECCCEEEEEC
GLAVEDWT
CEECCCCC
>Mature Secondary Structure
MYMFDTNTVSQLFRRHPRLLGLMEKIPPSAVCISSITEAELLYGVAKRQSLTLKATVAAF
CEEECCHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
LDSVTVYAWDSEAAHCYGAMRAEMTKNGRVMGALDQLIAAHAQSRGATIVTNDKAFAMVP
HHCEEEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEECCCEEEEEC
GLAVEDWT
CEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]