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The map label for this gene is yeeY [H]

Identifier: 157371714

GI number: 157371714

Start: 3849977

End: 3850918

Strand: Reverse

Name: yeeY [H]

Synonym: Spro_3477

Alternate gene names: 157371714

Gene position: 3850918-3849977 (Counterclockwise)

Preceding gene: 157371720

Following gene: 157371712

Centisome position: 70.67

GC content: 51.91

Gene sequence:

>942_bases
ATGACTAGATTATCCCTGGATGCGATTAAAATAATCAGCACCATAAAAAGTACCGGCTCTTTCTCAATGGCGGCGGAGGC
GTTGCATAAAACGCCGTCGGCGATATCCTATAGGGTTTCCAATATTGAAAGTAAACTCTGCGTGAAACTTTTTCATCGTA
ATGGCCCGATGATTACCCTGACAGATGAAGGGGAATTCCTGTTGCAAGAGGGCAGCTGGATTTTAAATGCGGTGCAGGAT
CTTGAGAGTAGGGTAAGAAACATCCCGAAATTCGATAATAATATCCGCATCGTCGTCGATAATTTCTTTCCACTGGAAAC
TATCACCCAGGATATCCGTGACTATATCCAGCACAGCCCAAATGCCAACATTTCCGTACAGCGTGAAGCACTGAATGGTA
CCTGGGACGCCCTGAAGAACAACCGGGCGGATTTGATTATCGCCATCGGCCAGATCCCGGACAGCGTGCAGGCCAAAACG
CTGATGCTCGGCAAACTGAATTTTGTGCTCTGTGTTTCACCTTCGCATCCCTTTGCGGCGCAGAAAAAGCCGGTGGATAA
AAACCAGCGGCTGAACGATATCGTGGTGGTGATTGCCGACAGCAGCCACGAACTGCCCAAACGTAACCACGGCACCATGC
CGTTACAGCGCCAACTGGTGGTGTGCGACGTCGAAAGTAAGCTGTCGCTGTTGAAGCGCGGCATTGGTCACGGCTTCCTG
CCACCGGCGCTGATAGAAAAAGAGTTGGCGAGCGGTGAGCTGGTGACGGTGCCGGTCGATATGCAAAAGGGGGACGAAAT
GATTTGGCTGGCCTGGCACCCGGCCAGCAAGGGCGCCGGATTTAGCTGGTGGCATGAGCGACTGACGCGTAAAAGCGACG
TCTTTAGCCTGATGGGACGCGAAGTGATACGTGACGGGGGTTACCCTTGGTGTAACAACTGA

Upstream 100 bases:

>100_bases
GGTTTTACTTACTCTTGTGTGACTTGAACGACTTTTACGCGCCAACCACTTGGGAATTTAGTGTCAATTTTTTCTTATTT
TATTTCAAAGAGGAATTTGT

Downstream 100 bases:

>100_bases
GGGAATTGACCACGAAGGGATGCGAAAATTAAACGTTTAATGCAATAAAAACCCCGTTGCCATCGGCCCCGGGGTTTTTT
AATGCGGCAACCTGCCGTTA

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 312

Protein sequence:

>313_residues
MTRLSLDAIKIISTIKSTGSFSMAAEALHKTPSAISYRVSNIESKLCVKLFHRNGPMITLTDEGEFLLQEGSWILNAVQD
LESRVRNIPKFDNNIRIVVDNFFPLETITQDIRDYIQHSPNANISVQREALNGTWDALKNNRADLIIAIGQIPDSVQAKT
LMLGKLNFVLCVSPSHPFAAQKKPVDKNQRLNDIVVVIADSSHELPKRNHGTMPLQRQLVVCDVESKLSLLKRGIGHGFL
PPALIEKELASGELVTVPVDMQKGDEMIWLAWHPASKGAGFSWWHERLTRKSDVFSLMGREVIRDGGYPWCNN

Sequences:

>Translated_313_residues
MTRLSLDAIKIISTIKSTGSFSMAAEALHKTPSAISYRVSNIESKLCVKLFHRNGPMITLTDEGEFLLQEGSWILNAVQD
LESRVRNIPKFDNNIRIVVDNFFPLETITQDIRDYIQHSPNANISVQREALNGTWDALKNNRADLIIAIGQIPDSVQAKT
LMLGKLNFVLCVSPSHPFAAQKKPVDKNQRLNDIVVVIADSSHELPKRNHGTMPLQRQLVVCDVESKLSLLKRGIGHGFL
PPALIEKELASGELVTVPVDMQKGDEMIWLAWHPASKGAGFSWWHERLTRKSDVFSLMGREVIRDGGYPWCNN
>Mature_312_residues
TRLSLDAIKIISTIKSTGSFSMAAEALHKTPSAISYRVSNIESKLCVKLFHRNGPMITLTDEGEFLLQEGSWILNAVQDL
ESRVRNIPKFDNNIRIVVDNFFPLETITQDIRDYIQHSPNANISVQREALNGTWDALKNNRADLIIAIGQIPDSVQAKTL
MLGKLNFVLCVSPSHPFAAQKKPVDKNQRLNDIVVVIADSSHELPKRNHGTMPLQRQLVVCDVESKLSLLKRGIGHGFLP
PALIEKELASGELVTVPVDMQKGDEMIWLAWHPASKGAGFSWWHERLTRKSDVFSLMGREVIRDGGYPWCNN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082024, Length=297, Percent_Identity=30.3030303030303, Blast_Score=160, Evalue=1e-40,
Organism=Escherichia coli, GI1787949, Length=283, Percent_Identity=29.6819787985866, Blast_Score=129, Evalue=3e-31,
Organism=Escherichia coli, GI1789492, Length=287, Percent_Identity=29.616724738676, Blast_Score=125, Evalue=3e-30,
Organism=Escherichia coli, GI1786508, Length=278, Percent_Identity=28.0575539568345, Blast_Score=113, Evalue=2e-26,
Organism=Escherichia coli, GI1786713, Length=277, Percent_Identity=28.158844765343, Blast_Score=111, Evalue=6e-26,
Organism=Escherichia coli, GI87082132, Length=277, Percent_Identity=24.9097472924188, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1790262, Length=176, Percent_Identity=25.5681818181818, Blast_Score=66, Evalue=3e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 35071; Mature: 34940

Theoretical pI: Translated: 8.35; Mature: 8.35

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRLSLDAIKIISTIKSTGSFSMAAEALHKTPSAISYRVSNIESKLCVKLFHRNGPMITL
CCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEE
TDEGEFLLQEGSWILNAVQDLESRVRNIPKFDNNIRIVVDNFFPLETITQDIRDYIQHSP
ECCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCC
NANISVQREALNGTWDALKNNRADLIIAIGQIPDSVQAKTLMLGKLNFVLCVSPSHPFAA
CCCEEEEEHHCCCHHHHHCCCCCEEEEEECCCCCCHHHHEEEEECCEEEEEECCCCCCCC
QKKPVDKNQRLNDIVVVIADSSHELPKRNHGTMPLQRQLVVCDVESKLSLLKRGIGHGFL
CCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHCEEEEEECHHHHHHHHHHCCCCCC
PPALIEKELASGELVTVPVDMQKGDEMIWLAWHPASKGAGFSWWHERLTRKSDVFSLMGR
CHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH
EVIRDGGYPWCNN
HHHHCCCCCCCCC
>Mature Secondary Structure 
TRLSLDAIKIISTIKSTGSFSMAAEALHKTPSAISYRVSNIESKLCVKLFHRNGPMITL
CCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEE
TDEGEFLLQEGSWILNAVQDLESRVRNIPKFDNNIRIVVDNFFPLETITQDIRDYIQHSP
ECCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCC
NANISVQREALNGTWDALKNNRADLIIAIGQIPDSVQAKTLMLGKLNFVLCVSPSHPFAA
CCCEEEEEHHCCCHHHHHCCCCCEEEEEECCCCCCHHHHEEEEECCEEEEEECCCCCCCC
QKKPVDKNQRLNDIVVVIADSSHELPKRNHGTMPLQRQLVVCDVESKLSLLKRGIGHGFL
CCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHCEEEEEECHHHHHHHHHHCCCCCC
PPALIEKELASGELVTVPVDMQKGDEMIWLAWHPASKGAGFSWWHERLTRKSDVFSLMGR
CHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH
EVIRDGGYPWCNN
HHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]