Definition | Serratia proteamaculans 568 chromosome, complete genome. |
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Accession | NC_009832 |
Length | 5,448,853 |
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The map label for this gene is yfeX [H]
Identifier: 157371695
GI number: 157371695
Start: 3829437
End: 3830336
Strand: Reverse
Name: yfeX [H]
Synonym: Spro_3458
Alternate gene names: 157371695
Gene position: 3830336-3829437 (Counterclockwise)
Preceding gene: 157371696
Following gene: 157371694
Centisome position: 70.3
GC content: 58.78
Gene sequence:
>900_bases ATGACACAGGTTCAGAGCGGCATTTTGCTGGAACACTGCCGTTTCGCCATTTTTATGGAAGCCACGGTACAGGGCGAATT TGCCGAACTTCGTCAGGGCTGCAAGCAGTTTTGCCAGACGTTGACCGAGCTGCAACAGCAGTTCCCCGATGCGCATTTGG GCGCGGTGGTTGCCTTTGGCTATGACGTTTGGCATGACCTGTCCAGCGGTCAGGGCGCCAAAGAGCTGAAGCCATTCACC CCGCTCGGTAAAGGGCTGGCACCGGCCACCCAGCGCGACCTGCTGATCCATATTCAATCCCTGCGTCATGATGTTAACTT CACGCTGGCCCAGGCCGCGCTGGCGGCGTTCGGCAACGCCATCAAAATTGAAGAAGAAACCCACGGTTTCCGCTGGGTGG AAGAGCGTGACCTGAGCGGCTTTATCGACGGCACGGAAAACCCGCAGGGCGACCAACGTCCGGAAGTGGCGGTGATTGCC GAAGGCGAAGAAGACGCAGGCGGCAGCTACGTGCTGGTGCAGCGTTACGAACACAACCTGCGTCAGTGGCAGCGTTTCAC CACTGAACAGCAGGAGCAGATTATCGGCCGTACCAAACATGACAGCGAAGAACTGCCGCCGGAGCAACGCCCGGACACCT CGCACGTCAGCCGCGTTGATCTGAAAGAAGACGGCAAGGGGCTGAAGATCCTGCGCCAAAGCCTGCCTTATGGCACCGCC AGCGGCAAGCACGGGCTGTATTTCATCGCCTACTGCGCGCGTCTGCATAACATCGAAAAGCAACTGCTGAGCATGTTCGG CGATCTGGACGGCAAACGCGACGCGATGCTGCGTTTCAGCCGTGCGGTGACCGGCAGTTATTACTTTGCGCCATCACTGA CGCGCCTGCTGTCGCTGTAA
Upstream 100 bases:
>100_bases TCTTTGCGTTCGGGCAAGGCAAATACCCCTGCTTGCGGTATGATGCTGCGCATTCGTAACAGGCTACTGTTACCCGATTC TGCTATTGAGGATAACGACA
Downstream 100 bases:
>100_bases CACCTCTACCGGGGCTGGCTACGTCGGCTCCGGTTTTACTTCCCCCCTCTGGCATGCCGCTCCGTTCCTGCCTTATAGCG TTTGATGCTTGAAAATCACT
Product: Dyp-type peroxidase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 299; Mature: 298
Protein sequence:
>299_residues MTQVQSGILLEHCRFAIFMEATVQGEFAELRQGCKQFCQTLTELQQQFPDAHLGAVVAFGYDVWHDLSSGQGAKELKPFT PLGKGLAPATQRDLLIHIQSLRHDVNFTLAQAALAAFGNAIKIEEETHGFRWVEERDLSGFIDGTENPQGDQRPEVAVIA EGEEDAGGSYVLVQRYEHNLRQWQRFTTEQQEQIIGRTKHDSEELPPEQRPDTSHVSRVDLKEDGKGLKILRQSLPYGTA SGKHGLYFIAYCARLHNIEKQLLSMFGDLDGKRDAMLRFSRAVTGSYYFAPSLTRLLSL
Sequences:
>Translated_299_residues MTQVQSGILLEHCRFAIFMEATVQGEFAELRQGCKQFCQTLTELQQQFPDAHLGAVVAFGYDVWHDLSSGQGAKELKPFT PLGKGLAPATQRDLLIHIQSLRHDVNFTLAQAALAAFGNAIKIEEETHGFRWVEERDLSGFIDGTENPQGDQRPEVAVIA EGEEDAGGSYVLVQRYEHNLRQWQRFTTEQQEQIIGRTKHDSEELPPEQRPDTSHVSRVDLKEDGKGLKILRQSLPYGTA SGKHGLYFIAYCARLHNIEKQLLSMFGDLDGKRDAMLRFSRAVTGSYYFAPSLTRLLSL >Mature_298_residues TQVQSGILLEHCRFAIFMEATVQGEFAELRQGCKQFCQTLTELQQQFPDAHLGAVVAFGYDVWHDLSSGQGAKELKPFTP LGKGLAPATQRDLLIHIQSLRHDVNFTLAQAALAAFGNAIKIEEETHGFRWVEERDLSGFIDGTENPQGDQRPEVAVIAE GEEDAGGSYVLVQRYEHNLRQWQRFTTEQQEQIIGRTKHDSEELPPEQRPDTSHVSRVDLKEDGKGLKILRQSLPYGTAS GKHGLYFIAYCARLHNIEKQLLSMFGDLDGKRDAMLRFSRAVTGSYYFAPSLTRLLSL
Specific function: Unknown
COG id: COG2837
COG function: function code P; Predicted iron-dependent peroxidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DyP-type peroxidase family [H]
Homologues:
Organism=Escherichia coli, GI87082102, Length=300, Percent_Identity=68.3333333333333, Blast_Score=426, Evalue=1e-120,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011008 - InterPro: IPR006314 [H]
Pfam domain/function: PF04261 Dyp_perox [H]
EC number: NA
Molecular weight: Translated: 33636; Mature: 33505
Theoretical pI: Translated: 5.96; Mature: 5.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQVQSGILLEHCRFAIFMEATVQGEFAELRQGCKQFCQTLTELQQQFPDAHLGAVVAFG CCCCCCCHHHHHHHHHEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH YDVWHDLSSGQGAKELKPFTPLGKGLAPATQRDLLIHIQSLRHDVNFTLAQAALAAFGNA HHHHHHCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCE IKIEEETHGFRWVEERDLSGFIDGTENPQGDQRPEVAVIAEGEEDAGGSYVLVQRYEHNL EEEECCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEHHHHHHH RQWQRFTTEQQEQIIGRTKHDSEELPPEQRPDTSHVSRVDLKEDGKGLKILRQSLPYGTA HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHEECCHHCCCCHHHHHHHHCCCCCC SGKHGLYFIAYCARLHNIEKQLLSMFGDLDGKRDAMLRFSRAVTGSYYFAPSLTRLLSL CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEHHHHHHHHHCC >Mature Secondary Structure TQVQSGILLEHCRFAIFMEATVQGEFAELRQGCKQFCQTLTELQQQFPDAHLGAVVAFG CCCCCCHHHHHHHHHEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH YDVWHDLSSGQGAKELKPFTPLGKGLAPATQRDLLIHIQSLRHDVNFTLAQAALAAFGNA HHHHHHCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCE IKIEEETHGFRWVEERDLSGFIDGTENPQGDQRPEVAVIAEGEEDAGGSYVLVQRYEHNL EEEECCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEHHHHHHH RQWQRFTTEQQEQIIGRTKHDSEELPPEQRPDTSHVSRVDLKEDGKGLKILRQSLPYGTA HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHEECCHHCCCCHHHHHHHHCCCCCC SGKHGLYFIAYCARLHNIEKQLLSMFGDLDGKRDAMLRFSRAVTGSYYFAPSLTRLLSL CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]