The gene/protein map for NC_009832 is currently unavailable.
Definition Serratia proteamaculans 568 chromosome, complete genome.
Accession NC_009832
Length 5,448,853

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The map label for this gene is ccmA [H]

Identifier: 157371628

GI number: 157371628

Start: 3750785

End: 3751465

Strand: Reverse

Name: ccmA [H]

Synonym: Spro_3391

Alternate gene names: 157371628

Gene position: 3751465-3750785 (Counterclockwise)

Preceding gene: 157371632

Following gene: 157371627

Centisome position: 68.85

GC content: 55.8

Gene sequence:

>681_bases
ATGGCTTATGCTATGATCGCTATCCCAAAGAAAAATATGAGTTCTCCGATGCTGGAAGCTAAAAATCTGAGTTGCGTCCG
CGATGAACGCACCCTGTTTAGCGCGTTAAGCTTTACGGTGAAACCGGGCGATATTATTCAGGTGGAAGGGCCGAACGGTG
CGGGCAAAACCAGCCTGCTGCGCATTTTGGCCGGCCTGGCGCGCCCGGAGGGCGGTGAAGTCCACTGGCACGGGCAAAAT
ACGTTGCGCCATCGTGAACGTTACCATCAGGATTTGTTGTTCCTTGGCCATCAGCCGGGGATTAAAACCATGTTAACGCC
CTTTGAGAACCTGCAGTTTTACCAGGCGGTGAGTTGCGTTCCCGATCGTCAGGCCATTTGGCAGGCGCTGGAGCAGGTAG
GGTTAGTGGGTTATGAGGATTTACCGGTGGCGCAGCTTTCCGCCGGGCAGCAACGCCGGGTTGCCCTGGCGCGTTTGTGG
CTCAGCGACAGCCCGTTGTGGATCCTGGATGAGCCGCTGACGGCCATCGACAAGCAGGGCGTGGCTGAATTAATTAGCCT
TTTTGAGCAACATGCGCAGCAGGGCGGCATGGTATTGTTGACCACCCATCAGGATTTGGCCGGCGTAACGCAGGCGGTAG
GTAAAATCAGCCTGACGGAAAACCGCATGGAGACTGTTTGA

Upstream 100 bases:

>100_bases
AGTTTAACGCCGCCGGTTTTTTCTTCGCATTATTGATCTGGGGCGCAATATTACCCCTATTGGAGTAGCTGAGTGCCCTG
CGGCGGGCTACGTGCCGCAG

Downstream 100 bases:

>100_bases
TGTTTTTGACCGTATTGCGCCGCGAGCTGAAGATTGCCTTTCGCAAAGGGTCGGAAATCGTTAATCCGCTGTGGTTCTTT
CTGATTGTTATCACGCTGTT

Product: cytochrome c biogenesis protein CcmA

Products: NA

Alternate protein names: Heme exporter protein A [H]

Number of amino acids: Translated: 226; Mature: 225

Protein sequence:

>226_residues
MAYAMIAIPKKNMSSPMLEAKNLSCVRDERTLFSALSFTVKPGDIIQVEGPNGAGKTSLLRILAGLARPEGGEVHWHGQN
TLRHRERYHQDLLFLGHQPGIKTMLTPFENLQFYQAVSCVPDRQAIWQALEQVGLVGYEDLPVAQLSAGQQRRVALARLW
LSDSPLWILDEPLTAIDKQGVAELISLFEQHAQQGGMVLLTTHQDLAGVTQAVGKISLTENRMETV

Sequences:

>Translated_226_residues
MAYAMIAIPKKNMSSPMLEAKNLSCVRDERTLFSALSFTVKPGDIIQVEGPNGAGKTSLLRILAGLARPEGGEVHWHGQN
TLRHRERYHQDLLFLGHQPGIKTMLTPFENLQFYQAVSCVPDRQAIWQALEQVGLVGYEDLPVAQLSAGQQRRVALARLW
LSDSPLWILDEPLTAIDKQGVAELISLFEQHAQQGGMVLLTTHQDLAGVTQAVGKISLTENRMETV
>Mature_225_residues
AYAMIAIPKKNMSSPMLEAKNLSCVRDERTLFSALSFTVKPGDIIQVEGPNGAGKTSLLRILAGLARPEGGEVHWHGQNT
LRHRERYHQDLLFLGHQPGIKTMLTPFENLQFYQAVSCVPDRQAIWQALEQVGLVGYEDLPVAQLSAGQQRRVALARLWL
SDSPLWILDEPLTAIDKQGVAELISLFEQHAQQGGMVLLTTHQDLAGVTQAVGKISLTENRMETV

Specific function: Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system [H]

COG id: COG4133

COG function: function code O; ABC-type transport system involved in cytochrome c biogenesis, ATPase component

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI27436953, Length=192, Percent_Identity=33.3333333333333, Blast_Score=85, Evalue=6e-17,
Organism=Homo sapiens, GI45446740, Length=202, Percent_Identity=28.2178217821782, Blast_Score=81, Evalue=9e-16,
Organism=Homo sapiens, GI47078218, Length=202, Percent_Identity=28.2178217821782, Blast_Score=80, Evalue=1e-15,
Organism=Homo sapiens, GI105990541, Length=172, Percent_Identity=29.6511627906977, Blast_Score=79, Evalue=4e-15,
Organism=Homo sapiens, GI215820660, Length=199, Percent_Identity=28.1407035175879, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI20143975, Length=199, Percent_Identity=28.1407035175879, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI21536376, Length=193, Percent_Identity=25.9067357512953, Blast_Score=75, Evalue=5e-14,
Organism=Homo sapiens, GI153792144, Length=192, Percent_Identity=28.6458333333333, Blast_Score=74, Evalue=7e-14,
Organism=Homo sapiens, GI150417984, Length=172, Percent_Identity=29.6511627906977, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI157502201, Length=169, Percent_Identity=32.5443786982249, Blast_Score=71, Evalue=6e-13,
Organism=Homo sapiens, GI157502203, Length=169, Percent_Identity=32.5443786982249, Blast_Score=71, Evalue=6e-13,
Organism=Homo sapiens, GI27881501, Length=172, Percent_Identity=23.2558139534884, Blast_Score=69, Evalue=5e-12,
Organism=Homo sapiens, GI30795238, Length=172, Percent_Identity=23.2558139534884, Blast_Score=68, Evalue=5e-12,
Organism=Homo sapiens, GI9665248, Length=199, Percent_Identity=27.1356783919598, Blast_Score=68, Evalue=6e-12,
Organism=Homo sapiens, GI73747915, Length=166, Percent_Identity=30.1204819277108, Blast_Score=68, Evalue=8e-12,
Organism=Homo sapiens, GI73747917, Length=166, Percent_Identity=30.1204819277108, Blast_Score=67, Evalue=9e-12,
Organism=Homo sapiens, GI27477115, Length=194, Percent_Identity=28.3505154639175, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI10947137, Length=226, Percent_Identity=27.8761061946903, Blast_Score=65, Evalue=6e-11,
Organism=Homo sapiens, GI27881506, Length=223, Percent_Identity=27.8026905829596, Blast_Score=65, Evalue=6e-11,
Organism=Escherichia coli, GI87082064, Length=206, Percent_Identity=58.7378640776699, Blast_Score=222, Evalue=1e-59,
Organism=Escherichia coli, GI87081709, Length=164, Percent_Identity=30.4878048780488, Blast_Score=88, Evalue=6e-19,
Organism=Escherichia coli, GI1788225, Length=202, Percent_Identity=30.6930693069307, Blast_Score=84, Evalue=7e-18,
Organism=Escherichia coli, GI1788761, Length=196, Percent_Identity=30.6122448979592, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI87081791, Length=224, Percent_Identity=28.5714285714286, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1788165, Length=194, Percent_Identity=29.3814432989691, Blast_Score=78, Evalue=4e-16,
Organism=Escherichia coli, GI1789873, Length=186, Percent_Identity=29.0322580645161, Blast_Score=78, Evalue=4e-16,
Organism=Escherichia coli, GI87081782, Length=177, Percent_Identity=27.683615819209, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1787370, Length=218, Percent_Identity=27.5229357798165, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1786872, Length=164, Percent_Identity=29.8780487804878, Blast_Score=73, Evalue=1e-14,
Organism=Escherichia coli, GI1787105, Length=204, Percent_Identity=26.9607843137255, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1786703, Length=207, Percent_Identity=29.951690821256, Blast_Score=72, Evalue=2e-14,
Organism=Escherichia coli, GI1786698, Length=211, Percent_Identity=25.1184834123223, Blast_Score=71, Evalue=5e-14,
Organism=Escherichia coli, GI1786253, Length=169, Percent_Identity=31.3609467455621, Blast_Score=71, Evalue=6e-14,
Organism=Escherichia coli, GI1789672, Length=220, Percent_Identity=25.9090909090909, Blast_Score=71, Evalue=7e-14,
Organism=Escherichia coli, GI1789593, Length=193, Percent_Identity=26.9430051813472, Blast_Score=71, Evalue=7e-14,
Organism=Escherichia coli, GI1787712, Length=169, Percent_Identity=28.9940828402367, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1789586, Length=201, Percent_Identity=27.8606965174129, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1790544, Length=213, Percent_Identity=25.3521126760563, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI87081834, Length=205, Percent_Identity=27.3170731707317, Blast_Score=68, Evalue=4e-13,
Organism=Escherichia coli, GI1789962, Length=196, Percent_Identity=27.0408163265306, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1787029, Length=195, Percent_Identity=26.1538461538462, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1786345, Length=209, Percent_Identity=26.3157894736842, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1786563, Length=191, Percent_Identity=28.2722513089005, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1790525, Length=184, Percent_Identity=25.5434782608696, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI1789891, Length=201, Percent_Identity=26.865671641791, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI1787089, Length=198, Percent_Identity=27.2727272727273, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1787041, Length=198, Percent_Identity=26.2626262626263, Blast_Score=64, Evalue=6e-12,
Organism=Escherichia coli, GI1786398, Length=200, Percent_Identity=28, Blast_Score=62, Evalue=2e-11,
Organism=Escherichia coli, GI1789963, Length=212, Percent_Identity=28.7735849056604, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI1790467, Length=214, Percent_Identity=23.3644859813084, Blast_Score=62, Evalue=4e-11,
Organism=Escherichia coli, GI48994997, Length=208, Percent_Identity=25.9615384615385, Blast_Score=61, Evalue=5e-11,
Organism=Escherichia coli, GI1786975, Length=185, Percent_Identity=30.2702702702703, Blast_Score=61, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI115533608, Length=206, Percent_Identity=29.126213592233, Blast_Score=70, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI17555318, Length=214, Percent_Identity=26.1682242990654, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI71992290, Length=212, Percent_Identity=25.4716981132075, Blast_Score=64, Evalue=9e-11,
Organism=Saccharomyces cerevisiae, GI6323217, Length=203, Percent_Identity=25.615763546798, Blast_Score=66, Evalue=4e-12,
Organism=Saccharomyces cerevisiae, GI6320874, Length=198, Percent_Identity=28.7878787878788, Blast_Score=64, Evalue=2e-11,
Organism=Drosophila melanogaster, GI19920532, Length=194, Percent_Identity=25.2577319587629, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI24580930, Length=194, Percent_Identity=25.2577319587629, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI28574744, Length=184, Percent_Identity=28.2608695652174, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI161076682, Length=185, Percent_Identity=26.4864864864865, Blast_Score=73, Evalue=1e-13,
Organism=Drosophila melanogaster, GI161076684, Length=185, Percent_Identity=26.4864864864865, Blast_Score=73, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24581617, Length=185, Percent_Identity=26.4864864864865, Blast_Score=73, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24581615, Length=185, Percent_Identity=26.4864864864865, Blast_Score=73, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24648314, Length=199, Percent_Identity=26.1306532663317, Blast_Score=71, Evalue=4e-13,
Organism=Drosophila melanogaster, GI24642252, Length=220, Percent_Identity=29.0909090909091, Blast_Score=68, Evalue=4e-12,
Organism=Drosophila melanogaster, GI18859989, Length=220, Percent_Identity=29.0909090909091, Blast_Score=68, Evalue=4e-12,
Organism=Drosophila melanogaster, GI17136592, Length=201, Percent_Identity=31.8407960199005, Blast_Score=68, Evalue=6e-12,
Organism=Drosophila melanogaster, GI221500365, Length=217, Percent_Identity=24.8847926267281, Blast_Score=67, Evalue=7e-12,
Organism=Drosophila melanogaster, GI116007184, Length=217, Percent_Identity=24.8847926267281, Blast_Score=67, Evalue=7e-12,
Organism=Drosophila melanogaster, GI45550390, Length=174, Percent_Identity=27.0114942528736, Blast_Score=67, Evalue=8e-12,
Organism=Drosophila melanogaster, GI24666092, Length=172, Percent_Identity=28.4883720930233, Blast_Score=67, Evalue=9e-12,
Organism=Drosophila melanogaster, GI28574533, Length=183, Percent_Identity=26.2295081967213, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI17647959, Length=185, Percent_Identity=29.7297297297297, Blast_Score=65, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR005895
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: =3.6.3.41 [H]

Molecular weight: Translated: 25019; Mature: 24888

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure: 

>Translated Secondary Structure
MAYAMIAIPKKNMSSPMLEAKNLSCVRDERTLFSALSFTVKPGDIIQVEGPNGAGKTSLL
CCEEEEEECCCCCCCCCHHHCCCHHHHHHHHHHHHHHEEECCCCEEEEECCCCCCHHHHH
RILAGLARPEGGEVHWHGQNTLRHRERYHQDLLFLGHQPGIKTMLTPFENLQFYQAVSCV
HHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHEECCCCCHHHHHCCHHHHHHHHHHHCC
PDRQAIWQALEQVGLVGYEDLPVAQLSAGQQRRVALARLWLSDSPLWILDEPLTAIDKQG
CCHHHHHHHHHHHCCCCCCCCCHHHHCCCHHHHHHHHHHHHCCCCEEEECCCHHHHHHCC
VAELISLFEQHAQQGGMVLLTTHQDLAGVTQAVGKISLTENRMETV
HHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHCEEECCHHHCCC
>Mature Secondary Structure 
AYAMIAIPKKNMSSPMLEAKNLSCVRDERTLFSALSFTVKPGDIIQVEGPNGAGKTSLL
CEEEEEECCCCCCCCCHHHCCCHHHHHHHHHHHHHHEEECCCCEEEEECCCCCCHHHHH
RILAGLARPEGGEVHWHGQNTLRHRERYHQDLLFLGHQPGIKTMLTPFENLQFYQAVSCV
HHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHEECCCCCHHHHHCCHHHHHHHHHHHCC
PDRQAIWQALEQVGLVGYEDLPVAQLSAGQQRRVALARLWLSDSPLWILDEPLTAIDKQG
CCHHHHHHHHHHHCCCCCCCCCHHHHCCCHHHHHHHHHHHHCCCCEEEECCCHHHHHHCC
VAELISLFEQHAQQGGMVLLTTHQDLAGVTQAVGKISLTENRMETV
HHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHCEEECCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA