Definition | Serratia proteamaculans 568 chromosome, complete genome. |
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Accession | NC_009832 |
Length | 5,448,853 |
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The map label for this gene is 157371601
Identifier: 157371601
GI number: 157371601
Start: 3725271
End: 3726530
Strand: Reverse
Name: 157371601
Synonym: Spro_3364
Alternate gene names: NA
Gene position: 3726530-3725271 (Counterclockwise)
Preceding gene: 157371602
Following gene: 157371600
Centisome position: 68.39
GC content: 62.94
Gene sequence:
>1260_bases ATGACCATTATCCTTTCTCACCCTTTACGGGTTGGCTGGCTGCTGCTTGCCTGTTGGGCACCGGCCAGCCTGGCAGCGGA ATTGACGCTGCAACAATCGTTGACGGCGGCGGAACGCTATTCGGCGGAACTTTCGGCCAATCGGCATCAGGTGACTGCTC TGGAGAACATGGCGGATTCGGCGATGCAATTGCCCGATCCCAAACTGAAGTTCGGGATTGAAAACGTGCCGGTGCAGGGT GGCAACGCCCGGCGACTCACCCGCGAAGGCATGACGATGGGGCGGGTCGGCATCATGCAGGATTACGTCAGCAGCACCAA ACGCCAGCGCAAGGCGGATACCCTGCGTGCCGAAGCCAGCCAGACGGATGCCGGCAGCGCTACCATCCGTGCCCGTTTGC AGCAGCAAACTGCGCAGGCGTGGCTGGAACTGGCGCTGAGCCGGCAAACCTTGCGTGACGCCACCGCACTGGTTACGGAG AGTGAGCGTCAAATAGCCACTCAGCATGCCGGTGTGGCCGGTGGCGGCACTCCTGCCAGCGGCGTGCTGGACGCCAGATT GACGCTGCTGGCCATGCAGGACCGCATCAGTGAGGCGCAGCGCGACGTTGCGGTAGCGCAGGCACGCCTGACGCAACTGA CCGGTCAGGCAACCACGGACACTGCCGGGGCAATGCCACGCTTTGAACGTTTGCCGGCCGACAGCGACGTCTTGCGCCAG GCGATCAAACAACATCCTGAGGTGCAGCAGGCCAGTCGCGAGGCTGACGTGGCCAGAGCGCGTTCGGCGCAGTCAGAGGT GGCGGCCATACCGGACGTGGGGGTTGAGGTGTATTACGGCAAGCGCGCCGACGATTATGAGGATCTGGCCGGGGTGATGT TTACCGTTGATCTGCCGCTGTTCCGTTCGCAGCGGCAGGATAAAGACTATGCCGCTGACGTGTCCCGCAACATGGAGGCC AACGATCGGCTGACGTTGCTGATCCGCGATCATCAGGCGCAGCTCGACACGCTGTTGGCACAGTACCAGGCGGCGCAGGC GCAATGGCAGCGACAGCAGCAACAGGCGATCCCCCTGCAGCAACAGCGAGTGACTTTGCTGTTGGCGCAATATCGCAGTG GAAAAAGCGACTTGTCTGCGCTGCTGGAGGCACGGCGGGCGCTGCTCGACAGCCGCCTCAGCGCCGGTAAAGCCGCCCGT GGACTGGCGCAGTTTTGGGCCGCCATCCGCTATCTCACCCCTCAGGAGGCAATGCAATGA
Upstream 100 bases:
>100_bases GTACTCCCTGTGGGAACGGCGGTTGATTTCAGCTTCCTGCCGGTCGACGGCGGTTATCGGCTGATTGCTATCGCAACCGC TCGGCAATAACGGAGGCGTC
Downstream 100 bases:
>100_bases GAATGCCATTTAAGCTGGCGCTGTTAGCGGCGTTAATCGGCGGTGGGCTGGCCGGGTATGGGTTGGGTTCGGCGGGGGAG GCCGCGCCGCAGGCAGACAA
Product: outer membrane efflux protein
Products: NA
Alternate protein names: CzcC Family Heavy Metal RND Efflux Outer Membrane Protein; Outer Membrane Cation Efflux Protein; Outer Membrane Protein; Heavy Metal RND Efflux Outer Membrane Protein CzcC Family; Cation Efflux Protein; Cobalt-Zinc-Cadmium Resistance Outer Membrane Porin; Outer Membrane Cation Efflux System Protein CzcC; Heavy Metal RND Efflux CzcC Family; Cation Resistance Protein CzcC; Efflux System Outer Membrane Protein; Outer Membrane Silver Efflux Protein
Number of amino acids: Translated: 419; Mature: 418
Protein sequence:
>419_residues MTIILSHPLRVGWLLLACWAPASLAAELTLQQSLTAAERYSAELSANRHQVTALENMADSAMQLPDPKLKFGIENVPVQG GNARRLTREGMTMGRVGIMQDYVSSTKRQRKADTLRAEASQTDAGSATIRARLQQQTAQAWLELALSRQTLRDATALVTE SERQIATQHAGVAGGGTPASGVLDARLTLLAMQDRISEAQRDVAVAQARLTQLTGQATTDTAGAMPRFERLPADSDVLRQ AIKQHPEVQQASREADVARARSAQSEVAAIPDVGVEVYYGKRADDYEDLAGVMFTVDLPLFRSQRQDKDYAADVSRNMEA NDRLTLLIRDHQAQLDTLLAQYQAAQAQWQRQQQQAIPLQQQRVTLLLAQYRSGKSDLSALLEARRALLDSRLSAGKAAR GLAQFWAAIRYLTPQEAMQ
Sequences:
>Translated_419_residues MTIILSHPLRVGWLLLACWAPASLAAELTLQQSLTAAERYSAELSANRHQVTALENMADSAMQLPDPKLKFGIENVPVQG GNARRLTREGMTMGRVGIMQDYVSSTKRQRKADTLRAEASQTDAGSATIRARLQQQTAQAWLELALSRQTLRDATALVTE SERQIATQHAGVAGGGTPASGVLDARLTLLAMQDRISEAQRDVAVAQARLTQLTGQATTDTAGAMPRFERLPADSDVLRQ AIKQHPEVQQASREADVARARSAQSEVAAIPDVGVEVYYGKRADDYEDLAGVMFTVDLPLFRSQRQDKDYAADVSRNMEA NDRLTLLIRDHQAQLDTLLAQYQAAQAQWQRQQQQAIPLQQQRVTLLLAQYRSGKSDLSALLEARRALLDSRLSAGKAAR GLAQFWAAIRYLTPQEAMQ >Mature_418_residues TIILSHPLRVGWLLLACWAPASLAAELTLQQSLTAAERYSAELSANRHQVTALENMADSAMQLPDPKLKFGIENVPVQGG NARRLTREGMTMGRVGIMQDYVSSTKRQRKADTLRAEASQTDAGSATIRARLQQQTAQAWLELALSRQTLRDATALVTES ERQIATQHAGVAGGGTPASGVLDARLTLLAMQDRISEAQRDVAVAQARLTQLTGQATTDTAGAMPRFERLPADSDVLRQA IKQHPEVQQASREADVARARSAQSEVAAIPDVGVEVYYGKRADDYEDLAGVMFTVDLPLFRSQRQDKDYAADVSRNMEAN DRLTLLIRDHQAQLDTLLAQYQAAQAQWQRQQQQAIPLQQQRVTLLLAQYRSGKSDLSALLEARRALLDSRLSAGKAARG LAQFWAAIRYLTPQEAMQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46054; Mature: 45922
Theoretical pI: Translated: 8.89; Mature: 8.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIILSHPLRVGWLLLACWAPASLAAELTLQQSLTAAERYSAELSANRHQVTALENMADS CEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH AMQLPDPKLKFGIENVPVQGGNARRLTREGMTMGRVGIMQDYVSSTKRQRKADTLRAEAS HHCCCCCHHHCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC QTDAGSATIRARLQQQTAQAWLELALSRQTLRDATALVTESERQIATQHAGVAGGGTPAS CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC GVLDARLTLLAMQDRISEAQRDVAVAQARLTQLTGQATTDTAGAMPRFERLPADSDVLRQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCHHHHHH AIKQHPEVQQASREADVARARSAQSEVAAIPDVGVEVYYGKRADDYEDLAGVMFTVDLPL HHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHEECCHH FRSQRQDKDYAADVSRNMEANDRLTLLIRDHQAQLDTLLAQYQAAQAQWQRQQQQAIPLQ HHCCCCCCHHHHHHHCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH QQRVTLLLAQYRSGKSDLSALLEARRALLDSRLSAGKAARGLAQFWAAIRYLTPQEAMQ HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHCC >Mature Secondary Structure TIILSHPLRVGWLLLACWAPASLAAELTLQQSLTAAERYSAELSANRHQVTALENMADS EEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH AMQLPDPKLKFGIENVPVQGGNARRLTREGMTMGRVGIMQDYVSSTKRQRKADTLRAEAS HHCCCCCHHHCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC QTDAGSATIRARLQQQTAQAWLELALSRQTLRDATALVTESERQIATQHAGVAGGGTPAS CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC GVLDARLTLLAMQDRISEAQRDVAVAQARLTQLTGQATTDTAGAMPRFERLPADSDVLRQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCHHHHHH AIKQHPEVQQASREADVARARSAQSEVAAIPDVGVEVYYGKRADDYEDLAGVMFTVDLPL HHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHEECCHH FRSQRQDKDYAADVSRNMEANDRLTLLIRDHQAQLDTLLAQYQAAQAQWQRQQQQAIPLQ HHCCCCCCHHHHHHHCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH QQRVTLLLAQYRSGKSDLSALLEARRALLDSRLSAGKAARGLAQFWAAIRYLTPQEAMQ HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA