Definition | Serratia proteamaculans 568 chromosome, complete genome. |
---|---|
Accession | NC_009832 |
Length | 5,448,853 |
Click here to switch to the map view.
The map label for this gene is cusB [H]
Identifier: 157371600
GI number: 157371600
Start: 3723823
End: 3725274
Strand: Reverse
Name: cusB [H]
Synonym: Spro_3363
Alternate gene names: 157371600
Gene position: 3725274-3723823 (Counterclockwise)
Preceding gene: 157371601
Following gene: 157371599
Centisome position: 68.37
GC content: 60.33
Gene sequence:
>1452_bases ATGAGAATGCCATTTAAGCTGGCGCTGTTAGCGGCGTTAATCGGCGGTGGGCTGGCCGGGTATGGGTTGGGTTCGGCGGG GGAGGCCGCGCCGCAGGCAGACAAAACGGAACGACAGGTACTGTATTGGTACGATCCGATGATGCCTGCCCAGCGCTTTG ATAAGCCGGGGAAATCCCCCTTTATGGATATGCAACTGGTGCCGCGCTATGCCGATGAGGCCGAGACGCAGGGCGGTGTG ACCATCAGTGCGCGCCAGCAGCAGAATCTGGGGGTACGTATTGAGACCGCTCAGTTGCGCGCGTTGGAGCAGCAGCTTGA CGCTTTTGGCAGCGTAGCGACGGATGAGCGTGGGGTGCAGATTATTGCCGCCCGTGCCAATGGGCTGGTGGAAAAACTCT ATGTCCGTGCCAGCCAGCAGCAGGTGAAAAAAGGCCAGCCGCTGGCACAGTTGTGGATCCCGGAGTGGAGTGCGGCACAG CAGGAGTATTTGGCGATACGGCAACTGGGCGATCGCGCATTGACCGCTGCCGCCCGCCAGCGGTTGCAGCTGTTATTTAT ACCCGAGGCGGTGATACGGCAGGTTGAGCGCACGGGCAAGCCCGAGCCACGTATTAAAATAGTGGCGCCGGAGAGCGGAT ATGTGAACAAGCTAAGCGTGCTTGAGGGCGCTCAGGTGACCGCGGCGCAGGGGTTGTTTGAGCTGGCGAGGCTGGATCCG GTGTGGATCGTGGCTGACTATCCGCAGGCGCAGGCCGGGTTACTCAAGGTGGGCGACAAGGTGCAGGCCGCCTCTGCCAG CTGGCCGGGGGAAAGGTTTGCAGGCGAGGTGAGCGAACTGCTGGCCAATGTCGATCCGCTAACCCGCACCTTCAAAGCGC GCATTCTGTTAAAAAATCCTCAGCAAAAGCTGCGGCCAGGCATGTACCTGCAACTGACGCTATCGCAGAACGCCGTCGGC AAACCGGTGCTGGCAATCCCGCAGGAGGCGCTGATAGATAACGGCGATCGTAACCGGGTATTGGTTGCCGAAGGTAACGG CCATTTCACGCCGGTGGAGGTGGTGGCCGGGCGCGTACAGGATGGCTGGGTGGAGATCAAACGCGGGCTGAGCGCCGGGC AACAGGTGGTGACCTCCGGTCAGTTCCTGATCGACTCCGAGGCCAGTATGCGCAGTGCCTTGCCGCAGATGGCGGCACAA ACCGAAGTTAAACAGTATCAGGCCGAAGGGGTGATTGAGGCACTCAATGGCGACACCATGACGTTGTCCCACGGACCGGT ACCTGAATTGCAGTGGCCGGCGATGACCATGGATTTTGCTCTGCCGTCGGGGGGATTACCGGCAGGCATCAAGCCTGGCG ACCGGGTAAAAATTCACTTTAGCGTCGACGACAGCGGTTCACATATCAGCCAGGTTCTGCCGATCAATGCCGGGCACGGA GGCCACTTATGA
Upstream 100 bases:
>100_bases GGGCGCTGCTCGACAGCCGCCTCAGCGCCGGTAAAGCCGCCCGTGGACTGGCGCAGTTTTGGGCCGCCATCCGCTATCTC ACCCCTCAGGAGGCAATGCA
Downstream 100 bases:
>100_bases TTGCATTCGTGATCCGCTGGTCGCTGCGCAACCGGCTGCTGGTGTTATTGGCCTCGGTGTTGTTGGCCGGTTGGGGTGTG TGGGCACTGCAGAAAGCGCC
Product: RND family efflux transporter MFP subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 483; Mature: 483
Protein sequence:
>483_residues MRMPFKLALLAALIGGGLAGYGLGSAGEAAPQADKTERQVLYWYDPMMPAQRFDKPGKSPFMDMQLVPRYADEAETQGGV TISARQQQNLGVRIETAQLRALEQQLDAFGSVATDERGVQIIAARANGLVEKLYVRASQQQVKKGQPLAQLWIPEWSAAQ QEYLAIRQLGDRALTAAARQRLQLLFIPEAVIRQVERTGKPEPRIKIVAPESGYVNKLSVLEGAQVTAAQGLFELARLDP VWIVADYPQAQAGLLKVGDKVQAASASWPGERFAGEVSELLANVDPLTRTFKARILLKNPQQKLRPGMYLQLTLSQNAVG KPVLAIPQEALIDNGDRNRVLVAEGNGHFTPVEVVAGRVQDGWVEIKRGLSAGQQVVTSGQFLIDSEASMRSALPQMAAQ TEVKQYQAEGVIEALNGDTMTLSHGPVPELQWPAMTMDFALPSGGLPAGIKPGDRVKIHFSVDDSGSHISQVLPINAGHG GHL
Sequences:
>Translated_483_residues MRMPFKLALLAALIGGGLAGYGLGSAGEAAPQADKTERQVLYWYDPMMPAQRFDKPGKSPFMDMQLVPRYADEAETQGGV TISARQQQNLGVRIETAQLRALEQQLDAFGSVATDERGVQIIAARANGLVEKLYVRASQQQVKKGQPLAQLWIPEWSAAQ QEYLAIRQLGDRALTAAARQRLQLLFIPEAVIRQVERTGKPEPRIKIVAPESGYVNKLSVLEGAQVTAAQGLFELARLDP VWIVADYPQAQAGLLKVGDKVQAASASWPGERFAGEVSELLANVDPLTRTFKARILLKNPQQKLRPGMYLQLTLSQNAVG KPVLAIPQEALIDNGDRNRVLVAEGNGHFTPVEVVAGRVQDGWVEIKRGLSAGQQVVTSGQFLIDSEASMRSALPQMAAQ TEVKQYQAEGVIEALNGDTMTLSHGPVPELQWPAMTMDFALPSGGLPAGIKPGDRVKIHFSVDDSGSHISQVLPINAGHG GHL >Mature_483_residues MRMPFKLALLAALIGGGLAGYGLGSAGEAAPQADKTERQVLYWYDPMMPAQRFDKPGKSPFMDMQLVPRYADEAETQGGV TISARQQQNLGVRIETAQLRALEQQLDAFGSVATDERGVQIIAARANGLVEKLYVRASQQQVKKGQPLAQLWIPEWSAAQ QEYLAIRQLGDRALTAAARQRLQLLFIPEAVIRQVERTGKPEPRIKIVAPESGYVNKLSVLEGAQVTAAQGLFELARLDP VWIVADYPQAQAGLLKVGDKVQAASASWPGERFAGEVSELLANVDPLTRTFKARILLKNPQQKLRPGMYLQLTLSQNAVG KPVLAIPQEALIDNGDRNRVLVAEGNGHFTPVEVVAGRVQDGWVEIKRGLSAGQQVVTSGQFLIDSEASMRSALPQMAAQ TEVKQYQAEGVIEALNGDTMTLSHGPVPELQWPAMTMDFALPSGGLPAGIKPGDRVKIHFSVDDSGSHISQVLPINAGHG GHL
Specific function: Part of a cation efflux system that mediates resistance to copper and silver [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]
Homologues:
Organism=Escherichia coli, GI1786787, Length=404, Percent_Identity=37.8712871287129, Blast_Score=262, Evalue=3e-71, Organism=Escherichia coli, GI87081796, Length=178, Percent_Identity=33.1460674157303, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006143 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52275; Mature: 52275
Theoretical pI: Translated: 7.19; Mature: 7.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRMPFKLALLAALIGGGLAGYGLGSAGEAAPQADKTERQVLYWYDPMMPAQRFDKPGKSP CCCCHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHCCCCCCCC FMDMQLVPRYADEAETQGGVTISARQQQNLGVRIETAQLRALEQQLDAFGSVATDERGVQ CCCHHHCCCHHHHCCCCCCEEEEECCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCEE IIAARANGLVEKLYVRASQQQVKKGQPLAQLWIPEWSAAQQEYLAIRQLGDRALTAAARQ EEEECHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH RLQLLFIPEAVIRQVERTGKPEPRIKIVAPESGYVNKLSVLEGAQVTAAQGLFELARLDP CEEEEECCHHHHHHHHHCCCCCCCEEEECCCCCCCCEEHHHCCCCHHHHHHHHHHHHCCC VWIVADYPQAQAGLLKVGDKVQAASASWPGERFAGEVSELLANVDPLTRTFKARILLKNP EEEEECCCCCCCCHHHCCCCCEECCCCCCCHHHHHHHHHHHHCCCHHHHHHEEEEEEECC QQKLRPGMYLQLTLSQNAVGKPVLAIPQEALIDNGDRNRVLVAEGNGHFTPVEVVAGRVQ HHHCCCCEEEEEEECCCCCCCCEEECCHHHHHCCCCCCEEEEECCCCCCCHHHHHHCCCC DGWVEIKRGLSAGQQVVTSGQFLIDSEASMRSALPQMAAQTEVKQYQAEGVIEALNGDTM HHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCEE TLSHGPVPELQWPAMTMDFALPSGGLPAGIKPGDRVKIHFSVDDSGSHISQVLPINAGHG EECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEEECCCCCCCHHEEEEECCCC GHL CCC >Mature Secondary Structure MRMPFKLALLAALIGGGLAGYGLGSAGEAAPQADKTERQVLYWYDPMMPAQRFDKPGKSP CCCCHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHCCCCCCCC FMDMQLVPRYADEAETQGGVTISARQQQNLGVRIETAQLRALEQQLDAFGSVATDERGVQ CCCHHHCCCHHHHCCCCCCEEEEECCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCEE IIAARANGLVEKLYVRASQQQVKKGQPLAQLWIPEWSAAQQEYLAIRQLGDRALTAAARQ EEEECHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH RLQLLFIPEAVIRQVERTGKPEPRIKIVAPESGYVNKLSVLEGAQVTAAQGLFELARLDP CEEEEECCHHHHHHHHHCCCCCCCEEEECCCCCCCCEEHHHCCCCHHHHHHHHHHHHCCC VWIVADYPQAQAGLLKVGDKVQAASASWPGERFAGEVSELLANVDPLTRTFKARILLKNP EEEEECCCCCCCCHHHCCCCCEECCCCCCCHHHHHHHHHHHHCCCHHHHHHEEEEEEECC QQKLRPGMYLQLTLSQNAVGKPVLAIPQEALIDNGDRNRVLVAEGNGHFTPVEVVAGRVQ HHHCCCCEEEEEEECCCCCCCCEEECCHHHHHCCCCCCEEEEECCCCCCCHHHHHHCCCC DGWVEIKRGLSAGQQVVTSGQFLIDSEASMRSALPQMAAQTEVKQYQAEGVIEALNGDTM HHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCEE TLSHGPVPELQWPAMTMDFALPSGGLPAGIKPGDRVKIHFSVDDSGSHISQVLPINAGHG EECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEEECCCCCCCHHEEEEECCCC GHL CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]