Definition | Serratia proteamaculans 568 chromosome, complete genome. |
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Accession | NC_009832 |
Length | 5,448,853 |
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The map label for this gene is 157371528
Identifier: 157371528
GI number: 157371528
Start: 3642417
End: 3643661
Strand: Reverse
Name: 157371528
Synonym: Spro_3291
Alternate gene names: NA
Gene position: 3643661-3642417 (Counterclockwise)
Preceding gene: 157371529
Following gene: 157371527
Centisome position: 66.87
GC content: 57.03
Gene sequence:
>1245_bases ATGTCTGAAGGTGTGGCTGTTGATGAAGCGGCTAAAGCGAATTCGGGCACGTCGCATTTTGCCATTCTGCTGTTTTTAGC GCTGGCATTAATGTCTGCATTGCTCAACAGCAGTGCGCCGACGCCGCTTTATCCGCTTTATCAACATGAGTTGGCGCTAA GCTCGGTCAGCCTGACGATCATTTATGGCGCCTATGCCGCTGGCGTACTGATCTCACTGTTCGGCGTGGGCAACATGGCC GGCAAGGTCAAAGACTTGCGCAGCATGATTGTGCCGGCGTTGCTGGTGGTGCTGGCCGGGGCTTTGCTGTTCTCGATGGC CGATTCGTTTTTGATGATGTTTATGGCGCGTTTGCTGGCCGGGATCGGCACCGGGGCATTAACCGGTGCGGCCAATATTG CGCTGGTGCGTTTTGGGCCGAAAGACGGCGGTAAAAATGCGGCGCTGATTGCCACGCTGTCGTTTACCACCGGCCTGGCG TTGGGGCCGATTTTCAGCGGTGTGGCGCTGCAAACCGGGTTCCATACCACTTCGCTGCCGTTCATTATCATTATGGCGGT GGCGGCAGTGGCCGCGCTGGGCGTGATGCTGAAATGGCCGGTTGAAGTGGTGGTCGCGCCGTTAAGCGGGGCGGCGGCGG TTGATGGCGCAGCGGAAAAAAGCTCATTGGCTGACGGCCTGCGTGCGACCGGTGGCAAGTTCTACCTGTGTGCCGGTGCA CTGTTTATCTGTTGGGCGGTGGCTGCCAGCATTTTGGCGATTGGCCCGAGCGTGTCGGAAAAGCTGCTTGGCATGCACAG CCGCGGTATTTATGGTTACGTGATCGCGGTTTACCTGGTGATTGCCGGTATCAGCCAGATCCTCAGCCGTCGTGTTAATG CACGTCACTCGCTGATGTTTGGCTGTCTGGCGCAGGCGTTGTCGGTGGTGGTGTTCGCCGAAGCGATTCAAATTCACTCG TTGGCCCTGGCCAGTGTCGGTATGGTGATTGCGGGTTACGCCTACGGGGCAATTTTTGTCGGCAGCGCCACGTTGGTGAA CCTGATTTCGCCGAAGGCCAGCCATGCAAGACTGATTTCGCTGTTTTATGTTATTGCTTATATCGCCAACTGGGTACCGA TTCTGTTGGGGGTAGTGATTGACCATGCCAGCCTGCATCTGGCGGTCAACCTGTTATTTATGGTCAGTGCCGTGGTGTGC TTGATTCTGAGCTTCATGGTGACCCGTGCGGGCTTCCCGCGCTGA
Upstream 100 bases:
>100_bases GCTATTTTGACGGTTATACCCGAAAGGTATGATAAACGCGTTTCCTGATGAATTTGGTTTCAGGGCTTGGTGTTTATCCA GATTGTTTCGGGAGAGAAAA
Downstream 100 bases:
>100_bases AATATTCTTGTTCTTTTAAGCGGAAGTCTTGCTGACTGAAACTTGAAATAAATATGTTCTCGCTGCGCAATGTGGCGAGC CGATTTCCCTGGTGTTGTTG
Product: major facilitator transporter
Products: NA
Alternate protein names: Facilitator Transporter; Facilitator Superfamily Protein; Multidrug Resistance Protein; Facilitator Superfamily Multidrug Efflux Transporter; Facilitator Superfamily Transporter; Valanimycin Resistance; Drug Resistance Efflux Protein
Number of amino acids: Translated: 414; Mature: 413
Protein sequence:
>414_residues MSEGVAVDEAAKANSGTSHFAILLFLALALMSALLNSSAPTPLYPLYQHELALSSVSLTIIYGAYAAGVLISLFGVGNMA GKVKDLRSMIVPALLVVLAGALLFSMADSFLMMFMARLLAGIGTGALTGAANIALVRFGPKDGGKNAALIATLSFTTGLA LGPIFSGVALQTGFHTTSLPFIIIMAVAAVAALGVMLKWPVEVVVAPLSGAAAVDGAAEKSSLADGLRATGGKFYLCAGA LFICWAVAASILAIGPSVSEKLLGMHSRGIYGYVIAVYLVIAGISQILSRRVNARHSLMFGCLAQALSVVVFAEAIQIHS LALASVGMVIAGYAYGAIFVGSATLVNLISPKASHARLISLFYVIAYIANWVPILLGVVIDHASLHLAVNLLFMVSAVVC LILSFMVTRAGFPR
Sequences:
>Translated_414_residues MSEGVAVDEAAKANSGTSHFAILLFLALALMSALLNSSAPTPLYPLYQHELALSSVSLTIIYGAYAAGVLISLFGVGNMA GKVKDLRSMIVPALLVVLAGALLFSMADSFLMMFMARLLAGIGTGALTGAANIALVRFGPKDGGKNAALIATLSFTTGLA LGPIFSGVALQTGFHTTSLPFIIIMAVAAVAALGVMLKWPVEVVVAPLSGAAAVDGAAEKSSLADGLRATGGKFYLCAGA LFICWAVAASILAIGPSVSEKLLGMHSRGIYGYVIAVYLVIAGISQILSRRVNARHSLMFGCLAQALSVVVFAEAIQIHS LALASVGMVIAGYAYGAIFVGSATLVNLISPKASHARLISLFYVIAYIANWVPILLGVVIDHASLHLAVNLLFMVSAVVC LILSFMVTRAGFPR >Mature_413_residues SEGVAVDEAAKANSGTSHFAILLFLALALMSALLNSSAPTPLYPLYQHELALSSVSLTIIYGAYAAGVLISLFGVGNMAG KVKDLRSMIVPALLVVLAGALLFSMADSFLMMFMARLLAGIGTGALTGAANIALVRFGPKDGGKNAALIATLSFTTGLAL GPIFSGVALQTGFHTTSLPFIIIMAVAAVAALGVMLKWPVEVVVAPLSGAAAVDGAAEKSSLADGLRATGGKFYLCAGAL FICWAVAASILAIGPSVSEKLLGMHSRGIYGYVIAVYLVIAGISQILSRRVNARHSLMFGCLAQALSVVVFAEAIQIHSL ALASVGMVIAGYAYGAIFVGSATLVNLISPKASHARLISLFYVIAYIANWVPILLGVVIDHASLHLAVNLLFMVSAVVCL ILSFMVTRAGFPR
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42718; Mature: 42586
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEGVAVDEAAKANSGTSHFAILLFLALALMSALLNSSAPTPLYPLYQHELALSSVSLTI CCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH IYGAYAAGVLISLFGVGNMAGKVKDLRSMIVPALLVVLAGALLFSMADSFLMMFMARLLA HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GIGTGALTGAANIALVRFGPKDGGKNAALIATLSFTTGLALGPIFSGVALQTGFHTTSLP HCCCCHHCCCCCEEEEEECCCCCCCCEEEEEEEHHHHHHHHHHHHHCHHHHCCCCCHHHH FIIIMAVAAVAALGVMLKWPVEVVVAPLSGAAAVDGAAEKSSLADGLRATGGKFYLCAGA HHHHHHHHHHHHHHHHHHCCHHHEEECCCCCHHCCCCHHHHHHHHHHHHCCCCEEHHHHH LFICWAVAASILAIGPSVSEKLLGMHSRGIYGYVIAVYLVIAGISQILSRRVNARHSLMF HHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GCLAQALSVVVFAEAIQIHSLALASVGMVIAGYAYGAIFVGSATLVNLISPKASHARLIS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH LFYVIAYIANWVPILLGVVIDHASLHLAVNLLFMVSAVVCLILSFMVTRAGFPR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SEGVAVDEAAKANSGTSHFAILLFLALALMSALLNSSAPTPLYPLYQHELALSSVSLTI CCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH IYGAYAAGVLISLFGVGNMAGKVKDLRSMIVPALLVVLAGALLFSMADSFLMMFMARLLA HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GIGTGALTGAANIALVRFGPKDGGKNAALIATLSFTTGLALGPIFSGVALQTGFHTTSLP HCCCCHHCCCCCEEEEEECCCCCCCCEEEEEEEHHHHHHHHHHHHHCHHHHCCCCCHHHH FIIIMAVAAVAALGVMLKWPVEVVVAPLSGAAAVDGAAEKSSLADGLRATGGKFYLCAGA HHHHHHHHHHHHHHHHHHCCHHHEEECCCCCHHCCCCHHHHHHHHHHHHCCCCEEHHHHH LFICWAVAASILAIGPSVSEKLLGMHSRGIYGYVIAVYLVIAGISQILSRRVNARHSLMF HHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GCLAQALSVVVFAEAIQIHSLALASVGMVIAGYAYGAIFVGSATLVNLISPKASHARLIS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH LFYVIAYIANWVPILLGVVIDHASLHLAVNLLFMVSAVVCLILSFMVTRAGFPR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA