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The map label for this gene is ycdZ [H]

Identifier: 157371527

GI number: 157371527

Start: 3641662

End: 3642156

Strand: Reverse

Name: ycdZ [H]

Synonym: Spro_3290

Alternate gene names: 157371527

Gene position: 3642156-3641662 (Counterclockwise)

Preceding gene: 157371528

Following gene: 157371525

Centisome position: 66.84

GC content: 58.38

Gene sequence:

>495_bases
ATGAACGTTATTTTTGCCATTGCTGTGACAACCGGGATCCTCTCCGGCGTTTGGGGCTGGGTGGCCGTCAGCCTGGGGTT
GATTAGCTGGGCCGGTTTCCTCGGCTGCACGGCCTACTTTGCTTGCCCGCAGGGTGGGCTGAAAGGCTTGTTGATAAGCT
TGCTAACCTGTGGCAGCGGGGTATTTTGGGCAATGGTGATTATTCACGGCAGCGAATTGGCCCCAGGCTTGAGCATCCTC
GGCTACCTGCTGACCGGCGCCGTGGCTTTCCTGATGTGTATCCAGGCAAAACAGCAGTGGTTGGGGTTTGTGCCCGGCAC
CTTTATTGGCGCTTGTGCCACCTTCGCCGGTGGCGGCGACTGGCCGCTGGTGAGCCTGTCCCTACTGGTGGGATTGGTGT
TCGGCTACGCGATGAAAAACAGCGGTCTTTGGCTGGCGGCACGCAATGAGAAACCCAAACAAGCTGGCGCTGTTACCGAG
CATGTTAACCGCTGA

Upstream 100 bases:

>100_bases
TAATTATCTTGTTTCTCATTACATATTTTATGTGAAATACATCACATGAAAATGCCGATTTTCGAGTAAACTGCGCGCTT
TCTCTGCTGCGGGTCGGTTT

Downstream 100 bases:

>100_bases
TTTAAATGGTGCCGCCGAGTGAAATGCGGTAGTGCAGGTCAACGCGCTCGATGCACGGCACCCCTTTGATGCGTTTGAGT
AAAATCTCTGTGGCGACTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MNVIFAIAVTTGILSGVWGWVAVSLGLISWAGFLGCTAYFACPQGGLKGLLISLLTCGSGVFWAMVIIHGSELAPGLSIL
GYLLTGAVAFLMCIQAKQQWLGFVPGTFIGACATFAGGGDWPLVSLSLLVGLVFGYAMKNSGLWLAARNEKPKQAGAVTE
HVNR

Sequences:

>Translated_164_residues
MNVIFAIAVTTGILSGVWGWVAVSLGLISWAGFLGCTAYFACPQGGLKGLLISLLTCGSGVFWAMVIIHGSELAPGLSIL
GYLLTGAVAFLMCIQAKQQWLGFVPGTFIGACATFAGGGDWPLVSLSLLVGLVFGYAMKNSGLWLAARNEKPKQAGAVTE
HVNR
>Mature_164_residues
MNVIFAIAVTTGILSGVWGWVAVSLGLISWAGFLGCTAYFACPQGGLKGLLISLLTCGSGVFWAMVIIHGSELAPGLSIL
GYLLTGAVAFLMCIQAKQQWLGFVPGTFIGACATFAGGGDWPLVSLSLLVGLVFGYAMKNSGLWLAARNEKPKQAGAVTE
HVNR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yahC [H]

Homologues:

Organism=Escherichia coli, GI87081825, Length=154, Percent_Identity=77.2727272727273, Blast_Score=231, Evalue=2e-62,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009476 [H]

Pfam domain/function: PF06496 DUF1097 [H]

EC number: NA

Molecular weight: Translated: 17067; Mature: 17067

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVIFAIAVTTGILSGVWGWVAVSLGLISWAGFLGCTAYFACPQGGLKGLLISLLTCGSG
CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCH
VFWAMVIIHGSELAPGLSILGYLLTGAVAFLMCIQAKQQWLGFVPGTFIGACATFAGGGD
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCC
WPLVSLSLLVGLVFGYAMKNSGLWLAARNEKPKQAGAVTEHVNR
CHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MNVIFAIAVTTGILSGVWGWVAVSLGLISWAGFLGCTAYFACPQGGLKGLLISLLTCGSG
CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCH
VFWAMVIIHGSELAPGLSILGYLLTGAVAFLMCIQAKQQWLGFVPGTFIGACATFAGGGD
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCC
WPLVSLSLLVGLVFGYAMKNSGLWLAARNEKPKQAGAVTEHVNR
CHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]