Definition | Serratia proteamaculans 568 chromosome, complete genome. |
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Accession | NC_009832 |
Length | 5,448,853 |
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The map label for this gene is qor [C]
Identifier: 157371421
GI number: 157371421
Start: 3503358
End: 3504377
Strand: Reverse
Name: qor [C]
Synonym: Spro_3182
Alternate gene names: 157371421
Gene position: 3504377-3503358 (Counterclockwise)
Preceding gene: 157371422
Following gene: 157371420
Centisome position: 64.31
GC content: 48.43
Gene sequence:
>1020_bases ATGAATAATAAGACGATGAAAGCCTTCACGTTTAAGCGTTACGGTAAATCTCCTGAATTAGGGTTTGATAACGTAGATTA TCCTTCGCTCAAGGCTAATGAAGTCTTGGTTAAAGTTTACGCTGTGGGCCTAAATCCAATCGACAATATGATCCCAACCG GAATATTTAAGCCGGTTCTGCATTTTAAGCTTCCCGCAACATTGGGTAGCGATCTGTCTGGGGTTGTTATTGCCGTGGGA AGTCGCGTGACTCGTTTTTCCCCAGGCGATGAAATCTTCGCCAGCATCTTCGATACGGGAACGGGGTCTCTTGCCGAATT TGCCGTGGTGCCTGAGAGCGCTGCGGCTATAAAACCGGCAAATCTGGATTTTGTGCAGGCGGCTTCGCTCCCTATGGTTA GCCTCACGTCCTGGCAGGCTCTGACAGAGCGTGTCAGGCTACGGCCTGGTCAGAAGGTTTTCATCCCGGCAGGTTCTGGA GGGATAGGCACCTTTGCTATCCAACTGGCGAAGCAATTGGGCGCAACCGTGGGGACGACAACCAGTACGGGCAATATCGA ATGGGTGAGGAGCCTGGGGGCTGACGAAGTCGTTGACTATAAAAAAGAAGAGTTCGAAAAAGTATTGGCTGGCTATGATG TGGTACTTGGCACCACCAGGGGAGATATGATTGAAAAATCCACCCAGATCCTTAAGCCTGGAGGAAGTATTGTTTCTCTC GTCGGGCCGTTAGATGTCAAATTTGCGCGGGCTAGAGGGTTAAATTTCTTTCTGACTTTTATCTTCAGGCTTATGAGCCG CAATATTATGCGTCTTTCAAAAAAGCGGGGCTTGACCTATACGTTTCTATTCGTTCGGCCAGAAGGTGATCAACTCAGCC AGATAGGTAAACTGGTAGAAACCGAACAAATCAAACCCATGATCGACAAGGTATTCCCCTTTGCTCAAACAAAGGAGGCT CTTGCCTACCTTGCCCAGGGGCATGCAAAGGGAAAAGTGGTTATCAAGATGCAGGATTAA
Upstream 100 bases:
>100_bases CAAACAAGATGAAGCCGCAGAGCGATATAAAACCCTTTAGACAATAAAGGGTCCTGCTCAGAACAATCGTTCAGCTGCCT GCACGGCAGGGGAAAAATAA
Downstream 100 bases:
>100_bases TTCCTTATTCTATGCTGCCGTGTTGCCGTTGTCGGATAAGTGGCTATCATCTTTCCTTTAAACCCTTGCCGCTGCCGAAA GGATTGCCTGCCACTATGCC
Product: alcohol dehydrogenase
Products: NADP(+); Semiquinone. [C]
Alternate protein names: NA
Number of amino acids: Translated: 339; Mature: 339
Protein sequence:
>339_residues MNNKTMKAFTFKRYGKSPELGFDNVDYPSLKANEVLVKVYAVGLNPIDNMIPTGIFKPVLHFKLPATLGSDLSGVVIAVG SRVTRFSPGDEIFASIFDTGTGSLAEFAVVPESAAAIKPANLDFVQAASLPMVSLTSWQALTERVRLRPGQKVFIPAGSG GIGTFAIQLAKQLGATVGTTTSTGNIEWVRSLGADEVVDYKKEEFEKVLAGYDVVLGTTRGDMIEKSTQILKPGGSIVSL VGPLDVKFARARGLNFFLTFIFRLMSRNIMRLSKKRGLTYTFLFVRPEGDQLSQIGKLVETEQIKPMIDKVFPFAQTKEA LAYLAQGHAKGKVVIKMQD
Sequences:
>Translated_339_residues MNNKTMKAFTFKRYGKSPELGFDNVDYPSLKANEVLVKVYAVGLNPIDNMIPTGIFKPVLHFKLPATLGSDLSGVVIAVG SRVTRFSPGDEIFASIFDTGTGSLAEFAVVPESAAAIKPANLDFVQAASLPMVSLTSWQALTERVRLRPGQKVFIPAGSG GIGTFAIQLAKQLGATVGTTTSTGNIEWVRSLGADEVVDYKKEEFEKVLAGYDVVLGTTRGDMIEKSTQILKPGGSIVSL VGPLDVKFARARGLNFFLTFIFRLMSRNIMRLSKKRGLTYTFLFVRPEGDQLSQIGKLVETEQIKPMIDKVFPFAQTKEA LAYLAQGHAKGKVVIKMQD >Mature_339_residues MNNKTMKAFTFKRYGKSPELGFDNVDYPSLKANEVLVKVYAVGLNPIDNMIPTGIFKPVLHFKLPATLGSDLSGVVIAVG SRVTRFSPGDEIFASIFDTGTGSLAEFAVVPESAAAIKPANLDFVQAASLPMVSLTSWQALTERVRLRPGQKVFIPAGSG GIGTFAIQLAKQLGATVGTTTSTGNIEWVRSLGADEVVDYKKEEFEKVLAGYDVVLGTTRGDMIEKSTQILKPGGSIVSL VGPLDVKFARARGLNFFLTFIFRLMSRNIMRLSKKRGLTYTFLFVRPEGDQLSQIGKLVETEQIKPMIDKVFPFAQTKEA LAYLAQGHAKGKVVIKMQD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily [H]
Homologues:
Organism=Homo sapiens, GI47519420, Length=359, Percent_Identity=36.2116991643454, Blast_Score=189, Evalue=2e-48, Organism=Homo sapiens, GI194239674, Length=349, Percent_Identity=27.7936962750716, Blast_Score=107, Evalue=1e-23, Organism=Homo sapiens, GI13236495, Length=349, Percent_Identity=27.7936962750716, Blast_Score=107, Evalue=1e-23, Organism=Homo sapiens, GI194239676, Length=207, Percent_Identity=31.8840579710145, Blast_Score=103, Evalue=2e-22, Organism=Homo sapiens, GI22538446, Length=349, Percent_Identity=28.6532951289398, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI22538444, Length=349, Percent_Identity=28.6532951289398, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI18379349, Length=315, Percent_Identity=28.2539682539683, Blast_Score=94, Evalue=1e-19, Organism=Homo sapiens, GI24308257, Length=349, Percent_Identity=25.214899713467, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI28557745, Length=216, Percent_Identity=31.0185185185185, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI41872631, Length=324, Percent_Identity=26.5432098765432, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI67078404, Length=210, Percent_Identity=29.5238095238095, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI90669511, Length=185, Percent_Identity=29.7297297297297, Blast_Score=73, Evalue=4e-13, Organism=Escherichia coli, GI1790485, Length=215, Percent_Identity=30.2325581395349, Blast_Score=90, Evalue=2e-19, Organism=Caenorhabditis elegans, GI71987554, Length=342, Percent_Identity=30.1169590643275, Blast_Score=128, Evalue=4e-30, Organism=Caenorhabditis elegans, GI17507255, Length=202, Percent_Identity=30.6930693069307, Blast_Score=89, Evalue=4e-18, Organism=Saccharomyces cerevisiae, GI6319520, Length=336, Percent_Identity=25.8928571428571, Blast_Score=70, Evalue=4e-13, Organism=Saccharomyces cerevisiae, GI6324486, Length=272, Percent_Identity=27.9411764705882, Blast_Score=69, Evalue=8e-13, Organism=Saccharomyces cerevisiae, GI6319621, Length=275, Percent_Identity=28.3636363636364, Blast_Score=69, Evalue=1e-12, Organism=Drosophila melanogaster, GI24581339, Length=366, Percent_Identity=29.5081967213115, Blast_Score=112, Evalue=5e-25, Organism=Drosophila melanogaster, GI24581341, Length=366, Percent_Identity=29.5081967213115, Blast_Score=112, Evalue=5e-25, Organism=Drosophila melanogaster, GI19920632, Length=250, Percent_Identity=24.8, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI221330659, Length=250, Percent_Identity=24.8, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR014182 - InterPro: IPR011032 - InterPro: IPR016040 - InterPro: IPR002364 [H]
Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]
EC number: 1.6.5.5 [C]
Molecular weight: Translated: 36893; Mature: 36893
Theoretical pI: Translated: 10.19; Mature: 10.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNKTMKAFTFKRYGKSPELGFDNVDYPSLKANEVLVKVYAVGLNPIDNMIPTGIFKPVL CCCCEEEEEEHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHCCHHHHHHHH HFKLPATLGSDLSGVVIAVGSRVTRFSPGDEIFASIFDTGTGSLAEFAVVPESAAAIKPA HEECCHHHCCCCCCEEEEECCCEEECCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCC NLDFVQAASLPMVSLTSWQALTERVRLRPGQKVFIPAGSGGIGTFAIQLAKQLGATVGTT CCCHHHHCCCCEEEHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCC TSTGNIEWVRSLGADEVVDYKKEEFEKVLAGYDVVLGTTRGDMIEKSTQILKPGGSIVSL CCCCCHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHCCCCCCEEEE VGPLDVKFARARGLNFFLTFIFRLMSRNIMRLSKKRGLTYTFLFVRPEGDQLSQIGKLVE ECCCCEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHH TEQIKPMIDKVFPFAQTKEALAYLAQGHAKGKVVIKMQD HHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEEECC >Mature Secondary Structure MNNKTMKAFTFKRYGKSPELGFDNVDYPSLKANEVLVKVYAVGLNPIDNMIPTGIFKPVL CCCCEEEEEEHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHCCHHHHHHHH HFKLPATLGSDLSGVVIAVGSRVTRFSPGDEIFASIFDTGTGSLAEFAVVPESAAAIKPA HEECCHHHCCCCCCEEEEECCCEEECCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCC NLDFVQAASLPMVSLTSWQALTERVRLRPGQKVFIPAGSGGIGTFAIQLAKQLGATVGTT CCCHHHHCCCCEEEHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCC TSTGNIEWVRSLGADEVVDYKKEEFEKVLAGYDVVLGTTRGDMIEKSTQILKPGGSIVSL CCCCCHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHCCCCCCEEEE VGPLDVKFARARGLNFFLTFIFRLMSRNIMRLSKKRGLTYTFLFVRPEGDQLSQIGKLVE ECCCCEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHH TEQIKPMIDKVFPFAQTKEALAYLAQGHAKGKVVIKMQD HHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NADPH [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): 0.017 {9,10-phenanthrenequinone}} 0.0153 {2,6-dichlorophenolindophenol}} 0.013 {2,6-dichlorophenolindophenol}} 0.065 {1,4-benzoquinone}} 0.007 {NADPH}} 0.0069 {NADPH}} 0.26 {1,4-naphthoquinone}} 0.0024 {1,2-naphthoquinone}} [C]
Substrates: NADPH; Quinone [C]
Specific reaction: NADPH + Quinone = NADP(+) + Semiquinone. [C]
General reaction: Oxidation; Reduction [C]
Inhibitor: 2, 3-Dimercaptopropanol; 2, 5-Dichloro-3, 6-dihydroxy -1, 4-benzoquinone; 4-Hydroxy coumarin; 5, 5'-Dithiobis (2-nitrobenzoate); ADP; Cibacronblue3GA; Coumarin; Cu2+; Dicoumarol warfarin, coumarin; Dithiothreitol preincubation with 9, 10-phenanthrenequino
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA