Click here to switch to the map view.

The map label for this gene is 157371380

Identifier: 157371380

GI number: 157371380

Start: 3459069

End: 3459683

Strand: Reverse

Name: 157371380

Synonym: Spro_3141

Alternate gene names: NA

Gene position: 3459683-3459069 (Counterclockwise)

Preceding gene: 157371384

Following gene: 157371379

Centisome position: 63.49

GC content: 50.57

Gene sequence:

>615_bases
ATGACTAAACATATAAATGAAAATCCCCCCAGGGGCCCCTCGGATCACAGCGTCCGCGATCAGGTCGTCGAAGCTGCCAC
AGAGCATTTCGGGCATTTTGGTTATGAGAAAACCACCGTATCGGAACTGGCTAAATCAATAGGTTTTTCAAAATCTTATA
TCTATAAGTTTTTCGATTCCAAGCAGGCGATCGGTGAGGTTATCTGCGCCAATCGGCTGGCAATGATCATGGCGATTGTC
AATTCAGCGATTGCAGATGCACCGTCGGCCTCCGAAAAATTGCGGCGTTTATTCAGAGCACTGACCGAAGCCGGCAGTGA
TTTGTTTTTTCACGATCGCAAGCTTTATGACATTGCTGCCGTTGCGGCGCGGGATAAGTGGCCTTCGGCAGAGGCCCATG
AAGAGCGTCTGAGAAAACTGATTGAGCACATCATTGTAGAAGGGCGGCAGGCGGGAGAGTTTGAACGGAAAACGCCGCTG
GATGAGGCTGCGCATGCGATATATCTGGTCATGCGGCCTTACATCAATCCGGTTCAACTGCAATACAATCTGGAAACGGC
ATCGGCGGCTGCTGCGCTGCTGTCCTCACTGATACTGAGGAGTTTATCACCCTGA

Upstream 100 bases:

>100_bases
AAGGGGAGCTTTGATATTCTCTGGGCCAACTCCGAGTTGTGACCTAATTACCAAATGGTCACTCGTTGTTAATCAAGGCT
CATTGAGCTAAGCTGGAAAA

Downstream 100 bases:

>100_bases
GTTGTGACTATTGACAATATTGGTCACTGGTCTGAGAATGCGGTTACTGTCCTGCCAAATTAATTAAGGGAACCCATGCT
CAGGCTTAATCCTGCCACTT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR; Transcriptional Regulator Protein TetR Family; Transcriptional Regulator Protein; TetR/AcrR Family Transcriptional Regulator; TetR-Family Transcriptional Regulatory Protein; Transcriptional Activator; HTH-Type Transcriptional Regulator Luxr

Number of amino acids: Translated: 204; Mature: 203

Protein sequence:

>204_residues
MTKHINENPPRGPSDHSVRDQVVEAATEHFGHFGYEKTTVSELAKSIGFSKSYIYKFFDSKQAIGEVICANRLAMIMAIV
NSAIADAPSASEKLRRLFRALTEAGSDLFFHDRKLYDIAAVAARDKWPSAEAHEERLRKLIEHIIVEGRQAGEFERKTPL
DEAAHAIYLVMRPYINPVQLQYNLETASAAAALLSSLILRSLSP

Sequences:

>Translated_204_residues
MTKHINENPPRGPSDHSVRDQVVEAATEHFGHFGYEKTTVSELAKSIGFSKSYIYKFFDSKQAIGEVICANRLAMIMAIV
NSAIADAPSASEKLRRLFRALTEAGSDLFFHDRKLYDIAAVAARDKWPSAEAHEERLRKLIEHIIVEGRQAGEFERKTPL
DEAAHAIYLVMRPYINPVQLQYNLETASAAAALLSSLILRSLSP
>Mature_203_residues
TKHINENPPRGPSDHSVRDQVVEAATEHFGHFGYEKTTVSELAKSIGFSKSYIYKFFDSKQAIGEVICANRLAMIMAIVN
SAIADAPSASEKLRRLFRALTEAGSDLFFHDRKLYDIAAVAARDKWPSAEAHEERLRKLIEHIIVEGRQAGEFERKTPLD
EAAHAIYLVMRPYINPVQLQYNLETASAAAALLSSLILRSLSP

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22783; Mature: 22652

Theoretical pI: Translated: 7.29; Mature: 7.29

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKHINENPPRGPSDHSVRDQVVEAATEHFGHFGYEKTTVSELAKSIGFSKSYIYKFFDS
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHH
KQAIGEVICANRLAMIMAIVNSAIADAPSASEKLRRLFRALTEAGSDLFFHDRKLYDIAA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
VAARDKWPSAEAHEERLRKLIEHIIVEGRQAGEFERKTPLDEAAHAIYLVMRPYINPVQL
HHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEE
QYNLETASAAAALLSSLILRSLSP
EECCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TKHINENPPRGPSDHSVRDQVVEAATEHFGHFGYEKTTVSELAKSIGFSKSYIYKFFDS
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHH
KQAIGEVICANRLAMIMAIVNSAIADAPSASEKLRRLFRALTEAGSDLFFHDRKLYDIAA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
VAARDKWPSAEAHEERLRKLIEHIIVEGRQAGEFERKTPLDEAAHAIYLVMRPYINPVQL
HHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEE
QYNLETASAAAALLSSLILRSLSP
EECCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA