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The map label for this gene is tdcF [C]

Identifier: 157371328

GI number: 157371328

Start: 3399593

End: 3399964

Strand: Reverse

Name: tdcF [C]

Synonym: Spro_3089

Alternate gene names: 157371328

Gene position: 3399964-3399593 (Counterclockwise)

Preceding gene: 157371329

Following gene: 157371327

Centisome position: 62.4

GC content: 47.85

Gene sequence:

>372_bases
ATGCGTACCATTATCGATACCGGCTTGCCGGAGATTGGCCAACCCTTTTCCTGGGCGACTAAAGGCGGCGGTATGCTGTT
CACCGCCCATGGCCCGGTCAGGCCCGACGGCAGCATTGAAACCGGTGAGCCGGAAAAACAAATTACCCTGACCTTTGATA
ATTTGGCCCGGACGTTAAAAGCGGCAGATAGCCGCAGCGATAATGTCCTGCAGGTAATTGTTTATCTCACCGATGTGAAC
GACGTTAAATTACTCGATGAAATATATAAGCAATATTTTAATTATCCTTACCCTAATCGTTCAACGGTAATTGTTGACAA
GCTGGTGGTGCCAGGCATGAAAATAGAAATAACCGTCACTGCTACTGCCTGA

Upstream 100 bases:

>100_bases
GGTTGCGGTCGACGGCGCCAACCATTACAACGTGCTGGATTCACTGTTCGCCAGGGATGGGGCGTTGATCCGCCAGTTAA
CCACTACGGGGAAATAAACC

Downstream 100 bases:

>100_bases
AAATAGATAACTATAATCCCCACCTGCAAATTCATTAAATAATGAATTAAGGAATCGCTATGTTTAATCACATTGGCCGT
TCGGCGGCCGATCCTATTAT

Product: endoribonuclease L-PSP

Products: NA

Alternate protein names: Endoribonuclease L-PSP Family Protein; L-PSP Family Endoribonuclease; Translation Initiation Inhibitor; Endoribonuclease L-Psp; YjgF-Like Protein Protein; Endoribonuclease; Protein Translation Intiation Inhibitor

Number of amino acids: Translated: 123; Mature: 123

Protein sequence:

>123_residues
MRTIIDTGLPEIGQPFSWATKGGGMLFTAHGPVRPDGSIETGEPEKQITLTFDNLARTLKAADSRSDNVLQVIVYLTDVN
DVKLLDEIYKQYFNYPYPNRSTVIVDKLVVPGMKIEITVTATA

Sequences:

>Translated_123_residues
MRTIIDTGLPEIGQPFSWATKGGGMLFTAHGPVRPDGSIETGEPEKQITLTFDNLARTLKAADSRSDNVLQVIVYLTDVN
DVKLLDEIYKQYFNYPYPNRSTVIVDKLVVPGMKIEITVTATA
>Mature_123_residues
MRTIIDTGLPEIGQPFSWATKGGGMLFTAHGPVRPDGSIETGEPEKQITLTFDNLARTLKAADSRSDNVLQVIVYLTDVN
DVKLLDEIYKQYFNYPYPNRSTVIVDKLVVPGMKIEITVTATA

Specific function: Anaerobic degradation of L-threonine to propionate. [C]

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13603; Mature: 13603

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTIIDTGLPEIGQPFSWATKGGGMLFTAHGPVRPDGSIETGEPEKQITLTFDNLARTLK
CCCCCCCCCCCCCCCCCEEECCCCEEEEECCCCCCCCCCCCCCCCCEEEEEHHHHHHHHH
AADSRSDNVLQVIVYLTDVNDVKLLDEIYKQYFNYPYPNRSTVIVDKLVVPGMKIEITVT
HCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCEEEEEEEE
ATA
ECC
>Mature Secondary Structure
MRTIIDTGLPEIGQPFSWATKGGGMLFTAHGPVRPDGSIETGEPEKQITLTFDNLARTLK
CCCCCCCCCCCCCCCCCEEECCCCEEEEECCCCCCCCCCCCCCCCCEEEEEHHHHHHHHH
AADSRSDNVLQVIVYLTDVNDVKLLDEIYKQYFNYPYPNRSTVIVDKLVVPGMKIEITVT
HCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCEEEEEEEE
ATA
ECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA