Definition | Serratia proteamaculans 568 chromosome, complete genome. |
---|---|
Accession | NC_009832 |
Length | 5,448,853 |
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The map label for this gene is yeaQ [H]
Identifier: 157371301
GI number: 157371301
Start: 3371584
End: 3371832
Strand: Reverse
Name: yeaQ [H]
Synonym: Spro_3061
Alternate gene names: 157371301
Gene position: 3371832-3371584 (Counterclockwise)
Preceding gene: 157371302
Following gene: 157371300
Centisome position: 61.88
GC content: 49.4
Gene sequence:
>249_bases ATGGGCATTATTTCCTGGATCATTTTTGGGTTAATCGCCGGTATCTTGGCTAAATGGATCATGCCGGGCAAAGACGGTGG TGGCTTTATCGTGACCGTCATTCTGGGGATTATCGGTGCAGTTGTCGGCGGCTATATCAGTACCTTCTTCGGTATGGGTC GTGTGGATGGCTTCAATCTGGGCAGCTTTGTTGTCGCAGTCATCGGTGCCCTGGTGGTGCTTTTTGTCTACAGAAAGATC AGAAGCTAA
Upstream 100 bases:
>100_bases TGCCGTTAAGGGAAGGGGCAGGTGTGAAAGTATCGAGCAGGCGCCGTCGTGGGTCTGGTGATAGGGTTTCTTAAGGCAAA AAGTAATAGGGAGAGTAAAA
Downstream 100 bases:
>100_bases TCAGATGCTGATCAACAGGGTCGCTGCGGCGGCCCTTTTTTCGTTAAATCACAAGGGTCGAGCGGCCTGAGCCGACGGCT GGAAGGGGATTACCATGGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 82; Mature: 81
Protein sequence:
>82_residues MGIISWIIFGLIAGILAKWIMPGKDGGGFIVTVILGIIGAVVGGYISTFFGMGRVDGFNLGSFVVAVIGALVVLFVYRKI RS
Sequences:
>Translated_82_residues MGIISWIIFGLIAGILAKWIMPGKDGGGFIVTVILGIIGAVVGGYISTFFGMGRVDGFNLGSFVVAVIGALVVLFVYRKI RS >Mature_81_residues GIISWIIFGLIAGILAKWIMPGKDGGGFIVTVILGIIGAVVGGYISTFFGMGRVDGFNLGSFVVAVIGALVVLFVYRKIR S
Specific function: Unknown
COG id: COG2261
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0410 family [H]
Homologues:
Organism=Escherichia coli, GI1788096, Length=82, Percent_Identity=82.9268292682927, Blast_Score=115, Evalue=5e-28, Organism=Escherichia coli, GI1787445, Length=83, Percent_Identity=65.0602409638554, Blast_Score=100, Evalue=2e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007341 [H]
Pfam domain/function: PF04226 Transgly_assoc [H]
EC number: NA
Molecular weight: Translated: 8608; Mature: 8476
Theoretical pI: Translated: 10.72; Mature: 10.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIISWIIFGLIAGILAKWIMPGKDGGGFIVTVILGIIGAVVGGYISTFFGMGRVDGFNL CHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH GSFVVAVIGALVVLFVYRKIRS HHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GIISWIIFGLIAGILAKWIMPGKDGGGFIVTVILGIIGAVVGGYISTFFGMGRVDGFNL HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH GSFVVAVIGALVVLFVYRKIRS HHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]