Definition | Serratia proteamaculans 568 chromosome, complete genome. |
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Accession | NC_009832 |
Length | 5,448,853 |
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The map label for this gene is 157371270
Identifier: 157371270
GI number: 157371270
Start: 3333457
End: 3334683
Strand: Reverse
Name: 157371270
Synonym: Spro_3030
Alternate gene names: NA
Gene position: 3334683-3333457 (Counterclockwise)
Preceding gene: 157371272
Following gene: 157371269
Centisome position: 61.2
GC content: 53.46
Gene sequence:
>1227_bases ATGGAAACAAATGCCGTTGAGTCTAAATTCAGTTTTGGCTCCTATACCCGATTACTGTCCGGCCCCGGACATGCCGCGCT TTCGTTGTTTGGTTTATTGCTGCGCTTTCCCGTGGCGATGCGATCTATTAGCTGCATTATGCTGCTTTCTGCCACGACCA ATTCGCTGTGGATAGCAGGCACCGTCGCCGGAACCTTAATGATTACCCAGGCTTTGGCCAGCCCGATACTGGGGGGCTTT GCTGACCGATTCAGCCAGCGAAAAGTGCTTATTGTCACCAGTTGCTGTCACGTTATCGCCATAGCTTTGCTGATTGCCCT GGTGTTTCTTGATGCCCATTTATGGCTAATTATGGCCGCGGCTATTGGTATTGGTTGTTCATCAGTACCGGTTGATGGCT TTATTCGTACCCGTTGGGCGGCGATGGTCACCGATGAGGCTCTGCGAACCGCCTATGCTTTAGAAACCGTACTCGACGAG ATTATTTTCTTGTTGGGGCCATTGGTTGCCATTGTGTTAGCTACGGTATTGCACCCCGCTGCGGGGTTGGCTTTATGTGC CGTATTCACCTTCAGTGGGTCGATGGCGTTGGTGCTGCATCGGCGTTCAGAGCCGGTTATTGTGCAGAAGGTTGACGAAA AAAACCGCAGGGCTATTAGCATGATATGGGTGCGTAGCCTGATGGTTTCTTATGCGGCGGTGGGCATATTCCTTGGCTCG ATCGATGTCATGATGATCGCCTTTGCCAAAGAGGTGGGCAATCCCACTCTCGCCGGAGTGCTGTTGTCTATTTGCGCCGG GGGCAGCCTGGTCGGGGGGCTCTGCTATGGTGCGATGAACTGGTCTATCCCGCAGCCACGGCTGCTGTTGCTCACATCCG CCACGCTTTTCGCAGGCACCGTTCCCCTGGTTTTCACCAGTTCCCCGTTGGTTATGGGTTTGTCTGCGTTTATCGCCGGT TTATCGGTGGCGCCGTTATTAATTACCTGCAGTAACCTGCTGGAGTCATTAACCCCGAAAGGCTGTTTATCCGAAGGCTT TTCCTGGCTTTCAAGCGCCGGGTGGCTGGGTTTTTCCTTCGGTGTCTCGGTGGGCGGGCAACTTTCAGATCAAACAGGGG CTGCCCAGGTCGCCTGGATCGCTCTGGCCGCCGGTATGCTCGCCTTATTAGCCAGTCTGTTCAGCCAATCACTACTCAGT AAGAAATCAATGCCAAGCCCCATTTAA
Upstream 100 bases:
>100_bases TTATCTCTATTGTGCGCACTTAATCTAATAGGTGGGTGGATGTATTCTGACGAATATATTTAATTGCCTGGGTATAAGCG ATATTTTAACGAGAGTCCTT
Downstream 100 bases:
>100_bases GCGGGTTCTCTCACTCTTATTACCGAGACAGGAAAACGGCCATCGTGAACCAGTTAACCATGGGTATGCCCGTTCCACGT ATTAGCTTTAATGAATTTGT
Product: major facilitator transporter
Products: NA
Alternate protein names: Facilitator Superfamily Protein; Transmembrane Efflux Protein; Transmembrane Transporter; ABC Transporter Permease Protein; Facilitator Superfamily Permease; Arabinose Efflux Permease Family Protein; Integral Membrane Protein; ABC Transporter Permease; ABC Transporter; ABC Transporter Integral Membrane Protein; Facilitator Superfamily Transporter Permease; Facilitator Superfamily Transporter; MFS Superfamily Transporter; MFS Family Transmembrane Protein; MFS Transporter; Transporter-Like Membrane Protein; Permease; Mfs Transporter; Transporter Integral Membrane Protein; Efflux Protein; Permease Of Facilitator Superfamily; Transporter Facilitator Family Protein; LOW QUALITY PROTEIN MFS Superfamily Transporter; Facilitator MFS1 Protein; MFS Family Transporter; ABC Transporter Membrane Spanning Protein; Transporter Transmembrane Subunit; Sugar MFS Permease
Number of amino acids: Translated: 408; Mature: 408
Protein sequence:
>408_residues METNAVESKFSFGSYTRLLSGPGHAALSLFGLLLRFPVAMRSISCIMLLSATTNSLWIAGTVAGTLMITQALASPILGGF ADRFSQRKVLIVTSCCHVIAIALLIALVFLDAHLWLIMAAAIGIGCSSVPVDGFIRTRWAAMVTDEALRTAYALETVLDE IIFLLGPLVAIVLATVLHPAAGLALCAVFTFSGSMALVLHRRSEPVIVQKVDEKNRRAISMIWVRSLMVSYAAVGIFLGS IDVMMIAFAKEVGNPTLAGVLLSICAGGSLVGGLCYGAMNWSIPQPRLLLLTSATLFAGTVPLVFTSSPLVMGLSAFIAG LSVAPLLITCSNLLESLTPKGCLSEGFSWLSSAGWLGFSFGVSVGGQLSDQTGAAQVAWIALAAGMLALLASLFSQSLLS KKSMPSPI
Sequences:
>Translated_408_residues METNAVESKFSFGSYTRLLSGPGHAALSLFGLLLRFPVAMRSISCIMLLSATTNSLWIAGTVAGTLMITQALASPILGGF ADRFSQRKVLIVTSCCHVIAIALLIALVFLDAHLWLIMAAAIGIGCSSVPVDGFIRTRWAAMVTDEALRTAYALETVLDE IIFLLGPLVAIVLATVLHPAAGLALCAVFTFSGSMALVLHRRSEPVIVQKVDEKNRRAISMIWVRSLMVSYAAVGIFLGS IDVMMIAFAKEVGNPTLAGVLLSICAGGSLVGGLCYGAMNWSIPQPRLLLLTSATLFAGTVPLVFTSSPLVMGLSAFIAG LSVAPLLITCSNLLESLTPKGCLSEGFSWLSSAGWLGFSFGVSVGGQLSDQTGAAQVAWIALAAGMLALLASLFSQSLLS KKSMPSPI >Mature_408_residues METNAVESKFSFGSYTRLLSGPGHAALSLFGLLLRFPVAMRSISCIMLLSATTNSLWIAGTVAGTLMITQALASPILGGF ADRFSQRKVLIVTSCCHVIAIALLIALVFLDAHLWLIMAAAIGIGCSSVPVDGFIRTRWAAMVTDEALRTAYALETVLDE IIFLLGPLVAIVLATVLHPAAGLALCAVFTFSGSMALVLHRRSEPVIVQKVDEKNRRAISMIWVRSLMVSYAAVGIFLGS IDVMMIAFAKEVGNPTLAGVLLSICAGGSLVGGLCYGAMNWSIPQPRLLLLTSATLFAGTVPLVFTSSPLVMGLSAFIAG LSVAPLLITCSNLLESLTPKGCLSEGFSWLSSAGWLGFSFGVSVGGQLSDQTGAAQVAWIALAAGMLALLASLFSQSLLS KKSMPSPI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42733; Mature: 42733
Theoretical pI: Translated: 8.33; Mature: 8.33
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METNAVESKFSFGSYTRLLSGPGHAALSLFGLLLRFPVAMRSISCIMLLSATTNSLWIAG CCCCHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEHH TVAGTLMITQALASPILGGFADRFSQRKVLIVTSCCHVIAIALLIALVFLDAHLWLIMAA HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIGIGCSSVPVDGFIRTRWAAMVTDEALRTAYALETVLDEIIFLLGPLVAIVLATVLHPA HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGLALCAVFTFSGSMALVLHRRSEPVIVQKVDEKNRRAISMIWVRSLMVSYAAVGIFLGS HHHHHHHHHHHCCCEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH IDVMMIAFAKEVGNPTLAGVLLSICAGGSLVGGLCYGAMNWSIPQPRLLLLTSATLFAGT HHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHCC VPLVFTSSPLVMGLSAFIAGLSVAPLLITCSNLLESLTPKGCLSEGFSWLSSAGWLGFSF CCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEC GVSVGGQLSDQTGAAQVAWIALAAGMLALLASLFSQSLLSKKSMPSPI CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure METNAVESKFSFGSYTRLLSGPGHAALSLFGLLLRFPVAMRSISCIMLLSATTNSLWIAG CCCCHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEHH TVAGTLMITQALASPILGGFADRFSQRKVLIVTSCCHVIAIALLIALVFLDAHLWLIMAA HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIGIGCSSVPVDGFIRTRWAAMVTDEALRTAYALETVLDEIIFLLGPLVAIVLATVLHPA HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGLALCAVFTFSGSMALVLHRRSEPVIVQKVDEKNRRAISMIWVRSLMVSYAAVGIFLGS HHHHHHHHHHHCCCEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH IDVMMIAFAKEVGNPTLAGVLLSICAGGSLVGGLCYGAMNWSIPQPRLLLLTSATLFAGT HHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHCC VPLVFTSSPLVMGLSAFIAGLSVAPLLITCSNLLESLTPKGCLSEGFSWLSSAGWLGFSF CCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEC GVSVGGQLSDQTGAAQVAWIALAAGMLALLASLFSQSLLSKKSMPSPI CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA