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The map label for this gene is norR [H]

Identifier: 157371272

GI number: 157371272

Start: 3337535

End: 3339067

Strand: Reverse

Name: norR [H]

Synonym: Spro_3032

Alternate gene names: 157371272

Gene position: 3339067-3337535 (Counterclockwise)

Preceding gene: 157371276

Following gene: 157371270

Centisome position: 61.28

GC content: 57.01

Gene sequence:

>1533_bases
ATGACAATCATGACCCTCTCCATACAATCTCTCGCCAGCATCGCTATTGAACTGCAAAGCGGCCTGACGCAACGCGACCG
CTTTCAACGTTTGATCAATAGCTTGCGTAGCCTGCTGCGTTGCGACGCTTCCGCATTATTACGTTTTGAAGGGCAACAGT
TCCGCCCATTGGCTATCGACGGGTTGGCCCAGGACGTGCTGGGGCGGCGCTTCGCGCTGGATGCTCACCCACGCCTGGAG
GCGATTGCCCGCGCCGGTGGCGTGGTACGTTTCCCTGCGGACAGCGAATTACCGGATCCTTACGATGGGTTGATCCCAGG
TCATGACCAACTGAAGGTTCATGCCTGCATTGGGTTGCCGCTGTTTGCCGAGCAGGATTTAATCGGTGCGCTGACTTTCG
ACAGTTTGGATCCGATGCAATTCGATCGCTTTAGCGATGAGGAACTGCGGTTAATCAGTGCTCTGGCGGCGGGGGCGCTA
AACAATGCGTTATTGGTCGAAGCGCTGGAGCGACAGGCGCTGTCTCCGCTGGCCTCTCCGGGGGGAAGTTCCCCGAGAGA
AAATGATGAAATCATCGGGCTTTCGTCGGTGATGCAGCAGCTCAAGCAGGAAATCAGCATCGTTGCCGGTTCCGAGCTCA
ACGTATTGATCACCGGAGAGACCGGCGTCGGGAAAGAGCTGGTAGTGCGGGCGATCCATCAGGGATCGGCGCGGGCGGCC
AATCCGCTGGTCTATCTAAACTGCGCCGCGCTGCCGGAAAGCGTGGCGGAAAGTGAGCTGTTCGGCCATGTCAAAGGCGC
ATTTACCGGTGCCATTCAACATCGCGCCGGAAAATTTGAAATGGCGGATAATGGCACCCTGTTCCTCGATGAGATTGGCG
AGCTGTCGTTATCGTTACAGGCCAAGTTGCTAAGGGTGATCCAATACGGTGACCTCCAGCGGGTGGGGGATGACCGGGTC
AAGCGCGTTAACGTACGCATTTTGGCGGCCACCAATCGTGACCTGAAACAGGCTGCGGTGGATGGGGCATTCCGCCTGGA
TTTATACCATCGTCTGAGCGTGTTCCCACTTGCCGTGCCGCCATTGCGTGAACGGGTCAGCGATATTGCCCTGCTGGCGG
GGTACTTTTGCGAACGCTGCCGCATCAAACTGGGCTTGATGCAGTTAACGCTCTCGGTACAGGCGTTATCCGCGCTCGAA
CAGTATTCATGGCCGGGGAATATTCGCGAACTGGAACATTCGATCTATCGGGCGGCGATTTTAGCCCGCGCCGAGCAAAG
CAGCAGCGAGCTACAACTGTTACCGGCGCATTTCACTATCAAGGCTGGAGCCTTGCCGGCCAGGATCATAGATGACGCCC
TGCCGGAGAGTGCTATTGGGGTGAGTCTTGCCACACTGACGCAGCATTTCCAGCGCAGCGTGATTGAGAAAACCCTGGTG
GAATGCGAGATGAACTGGGCCGCCACGGCACGTAAGCTGGAGTTGGACAGCGGTAACTTGCACCGGCTGGCCAAGCGATT
GAATATGAAATAA

Upstream 100 bases:

>100_bases
GCGTGCCAGTTTTTATCTTATTGTTTTATAAATACTAATAATTATTTGATGTCATTTTGACATCGGCGTAGCATTGTCTT
TATGACTAGTAAGTGTCGGA

Downstream 100 bases:

>100_bases
ATACGCTTTTTTTATGATACCTATTTCTCATATGTTGGGCGATTTTATCAATGTTTTTTGAAAACCACACAGATGACTTT
ATATATGGAAATAATAATGG

Product: anaerobic nitric oxide reductase transcription regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 510; Mature: 509

Protein sequence:

>510_residues
MTIMTLSIQSLASIAIELQSGLTQRDRFQRLINSLRSLLRCDASALLRFEGQQFRPLAIDGLAQDVLGRRFALDAHPRLE
AIARAGGVVRFPADSELPDPYDGLIPGHDQLKVHACIGLPLFAEQDLIGALTFDSLDPMQFDRFSDEELRLISALAAGAL
NNALLVEALERQALSPLASPGGSSPRENDEIIGLSSVMQQLKQEISIVAGSELNVLITGETGVGKELVVRAIHQGSARAA
NPLVYLNCAALPESVAESELFGHVKGAFTGAIQHRAGKFEMADNGTLFLDEIGELSLSLQAKLLRVIQYGDLQRVGDDRV
KRVNVRILAATNRDLKQAAVDGAFRLDLYHRLSVFPLAVPPLRERVSDIALLAGYFCERCRIKLGLMQLTLSVQALSALE
QYSWPGNIRELEHSIYRAAILARAEQSSSELQLLPAHFTIKAGALPARIIDDALPESAIGVSLATLTQHFQRSVIEKTLV
ECEMNWAATARKLELDSGNLHRLAKRLNMK

Sequences:

>Translated_510_residues
MTIMTLSIQSLASIAIELQSGLTQRDRFQRLINSLRSLLRCDASALLRFEGQQFRPLAIDGLAQDVLGRRFALDAHPRLE
AIARAGGVVRFPADSELPDPYDGLIPGHDQLKVHACIGLPLFAEQDLIGALTFDSLDPMQFDRFSDEELRLISALAAGAL
NNALLVEALERQALSPLASPGGSSPRENDEIIGLSSVMQQLKQEISIVAGSELNVLITGETGVGKELVVRAIHQGSARAA
NPLVYLNCAALPESVAESELFGHVKGAFTGAIQHRAGKFEMADNGTLFLDEIGELSLSLQAKLLRVIQYGDLQRVGDDRV
KRVNVRILAATNRDLKQAAVDGAFRLDLYHRLSVFPLAVPPLRERVSDIALLAGYFCERCRIKLGLMQLTLSVQALSALE
QYSWPGNIRELEHSIYRAAILARAEQSSSELQLLPAHFTIKAGALPARIIDDALPESAIGVSLATLTQHFQRSVIEKTLV
ECEMNWAATARKLELDSGNLHRLAKRLNMK
>Mature_509_residues
TIMTLSIQSLASIAIELQSGLTQRDRFQRLINSLRSLLRCDASALLRFEGQQFRPLAIDGLAQDVLGRRFALDAHPRLEA
IARAGGVVRFPADSELPDPYDGLIPGHDQLKVHACIGLPLFAEQDLIGALTFDSLDPMQFDRFSDEELRLISALAAGALN
NALLVEALERQALSPLASPGGSSPRENDEIIGLSSVMQQLKQEISIVAGSELNVLITGETGVGKELVVRAIHQGSARAAN
PLVYLNCAALPESVAESELFGHVKGAFTGAIQHRAGKFEMADNGTLFLDEIGELSLSLQAKLLRVIQYGDLQRVGDDRVK
RVNVRILAATNRDLKQAAVDGAFRLDLYHRLSVFPLAVPPLRERVSDIALLAGYFCERCRIKLGLMQLTLSVQALSALEQ
YSWPGNIRELEHSIYRAAILARAEQSSSELQLLPAHFTIKAGALPARIIDDALPESAIGVSLATLTQHFQRSVIEKTLVE
CEMNWAATARKLELDSGNLHRLAKRLNMK

Specific function: Required for the expression of anaerobic nitric oxide (NO) reductase, acts as a transcriptional activator for at least the norVW operon. Activation also requires sigma-54 [H]

COG id: COG3604

COG function: function code KT; Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 sigma-54 factor interaction domain [H]

Homologues:

Organism=Escherichia coli, GI87082152, Length=510, Percent_Identity=66.4705882352941, Blast_Score=637, Evalue=0.0,
Organism=Escherichia coli, GI87082117, Length=277, Percent_Identity=49.4584837545126, Blast_Score=253, Evalue=2e-68,
Organism=Escherichia coli, GI1789087, Length=332, Percent_Identity=41.2650602409639, Blast_Score=247, Evalue=1e-66,
Organism=Escherichia coli, GI1790437, Length=254, Percent_Identity=52.3622047244094, Blast_Score=242, Evalue=5e-65,
Organism=Escherichia coli, GI1788550, Length=231, Percent_Identity=49.7835497835498, Blast_Score=228, Evalue=7e-61,
Organism=Escherichia coli, GI1790299, Length=237, Percent_Identity=46.4135021097046, Blast_Score=213, Evalue=3e-56,
Organism=Escherichia coli, GI1789233, Length=226, Percent_Identity=46.4601769911504, Blast_Score=209, Evalue=5e-55,
Organism=Escherichia coli, GI1788905, Length=244, Percent_Identity=43.4426229508197, Blast_Score=207, Evalue=1e-54,
Organism=Escherichia coli, GI87081872, Length=236, Percent_Identity=47.4576271186441, Blast_Score=201, Evalue=9e-53,
Organism=Escherichia coli, GI1787583, Length=304, Percent_Identity=37.828947368421, Blast_Score=191, Evalue=1e-49,
Organism=Escherichia coli, GI1786524, Length=254, Percent_Identity=43.3070866141732, Blast_Score=187, Evalue=1e-48,
Organism=Escherichia coli, GI1789828, Length=235, Percent_Identity=37.8723404255319, Blast_Score=137, Evalue=2e-33,
Organism=Escherichia coli, GI87081858, Length=235, Percent_Identity=33.6170212765957, Blast_Score=111, Evalue=1e-25,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR003018
- InterPro:   IPR009057
- InterPro:   IPR002078 [H]

Pfam domain/function: PF01590 GAF; PF00158 Sigma54_activat [H]

EC number: NA

Molecular weight: Translated: 55751; Mature: 55620

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: PS00675 SIGMA54_INTERACT_1 ; PS00676 SIGMA54_INTERACT_2 ; PS00688 SIGMA54_INTERACT_3 ; PS50045 SIGMA54_INTERACT_4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIMTLSIQSLASIAIELQSGLTQRDRFQRLINSLRSLLRCDASALLRFEGQQFRPLAID
CEEEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCHHH
GLAQDVLGRRFALDAHPRLEAIARAGGVVRFPADSELPDPYDGLIPGHDQLKVHACIGLP
HHHHHHHCCCEECCCCHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCC
LFAEQDLIGALTFDSLDPMQFDRFSDEELRLISALAAGALNNALLVEALERQALSPLASP
CCCCCCHHEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCC
GGSSPRENDEIIGLSSVMQQLKQEISIVAGSELNVLITGETGVGKELVVRAIHQGSARAA
CCCCCCCCCCEEEHHHHHHHHHHHHHEEECCCEEEEEECCCCCCHHHHHHHHHCCCCCCC
NPLVYLNCAALPESVAESELFGHVKGAFTGAIQHRAGKFEMADNGTLFLDEIGELSLSLQ
CCEEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEECCCCHHHHHH
AKLLRVIQYGDLQRVGDDRVKRVNVRILAATNRDLKQAAVDGAFRLDLYHRLSVFPLAVP
HHHHHHHHHCCHHHCCCCCEEEEEEEEEEECCCHHHHHHHCCHHEEEHHHHHHCCCCCCC
PLRERVSDIALLAGYFCERCRIKLGLMQLTLSVQALSALEQYSWPGNIRELEHSIYRAAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
LARAEQSSSELQLLPAHFTIKAGALPARIIDDALPESAIGVSLATLTQHFQRSVIEKTLV
HHHHHCCCCCEEEEECEEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
ECEMNWAATARKLELDSGNLHRLAKRLNMK
HHCCCHHHCCEEEECCCCCHHHHHHHHCCC
>Mature Secondary Structure 
TIMTLSIQSLASIAIELQSGLTQRDRFQRLINSLRSLLRCDASALLRFEGQQFRPLAID
EEEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCHHH
GLAQDVLGRRFALDAHPRLEAIARAGGVVRFPADSELPDPYDGLIPGHDQLKVHACIGLP
HHHHHHHCCCEECCCCHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCC
LFAEQDLIGALTFDSLDPMQFDRFSDEELRLISALAAGALNNALLVEALERQALSPLASP
CCCCCCHHEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCC
GGSSPRENDEIIGLSSVMQQLKQEISIVAGSELNVLITGETGVGKELVVRAIHQGSARAA
CCCCCCCCCCEEEHHHHHHHHHHHHHEEECCCEEEEEECCCCCCHHHHHHHHHCCCCCCC
NPLVYLNCAALPESVAESELFGHVKGAFTGAIQHRAGKFEMADNGTLFLDEIGELSLSLQ
CCEEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEECCCCHHHHHH
AKLLRVIQYGDLQRVGDDRVKRVNVRILAATNRDLKQAAVDGAFRLDLYHRLSVFPLAVP
HHHHHHHHHCCHHHCCCCCEEEEEEEEEEECCCHHHHHHHCCHHEEEHHHHHHCCCCCCC
PLRERVSDIALLAGYFCERCRIKLGLMQLTLSVQALSALEQYSWPGNIRELEHSIYRAAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
LARAEQSSSELQLLPAHFTIKAGALPARIIDDALPESAIGVSLATLTQHFQRSVIEKTLV
HHHHHCCCCCEEEEECEEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
ECEMNWAATARKLELDSGNLHRLAKRLNMK
HHCCCHHHCCEEEECCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA