| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is hexR [H]
Identifier: 157371009
GI number: 157371009
Start: 3048963
End: 3049835
Strand: Direct
Name: hexR [H]
Synonym: Spro_2769
Alternate gene names: 157371009
Gene position: 3048963-3049835 (Clockwise)
Preceding gene: 157371004
Following gene: 157371010
Centisome position: 55.96
GC content: 51.43
Gene sequence:
>873_bases ATGAATACGCTGGAAAAAATCCAGAGCCATCTGGAGCTACTGAGCAAATCTGAACGGAAAGTCGCCGAGGTGATCCTCGC CTCCCCGCAGACCGCCATTCACTCAAGTATCGCGACGCTGGCCAGGATGGCGGACGTTAGCGAGCCCACCGTCAACCGCT TTTGTCGCCGTCTCGATACCAAGGGTTTTCCCGATTTTAAACTGCATCTTGCCCAAAGCCTGGCCAACGGCACCCCGTAC GTAAACCGTAACGTGGAGGAAGATGACAGCGTTGCTTCCTATACCGGTAAAATTTTCGAATCCGTCATGGCCAGCCTTGA TACAGTAAAGGCAAATTTGGATATTGCAGCAATCAATCGTGCGGTTGACTTGCTTACCCAGGCAAAAAAAATCTCTTTCT TCGGTTTGGGTGCCTCGGCGGCAGTGGCCCACGACGCGATGAACAAATTTTTCCGCTTTAATATTCCGGTGGTCTATTTC GATGACATCGTCATGCAACGCATGGGATGCATGAACTCCAGCGAGGGGGATGTGGTAGTACTCATCTCCCATACCGGTCG CACCAAAAACCTGGTGGAGATGGCGCAACTGGCACGTGAAAACGATGCCACGGTAATAGCCATTACCTCGCGCGATACCC CACTGGCTCATGAAGCCACGCTGGCATTATTGCTCGATGTTCCGGAAGATACCGACGTTTATATGCCGATGGTATCGCGA ATTGCGCAATTAACACTCATCGACGTGCTGGCCACCGGATTTACCTTGCGTAGAGGGGCCAAATTCAGAGATAACTTGAA GCGGGTCAAGGAAGCGTTGAAAGAATCGCGCTTTGATAAGGGTGTGGTTATCCCCAACAGTTTCGACTCGTAA
Upstream 100 bases:
>100_bases ACACTGCCAACGGTTACCAGCACGTAGTATATTTTCACTAAACCGGCATTGATTTCTCCTTTGATTGAAATCGACAAAAC CCATGAGTGACTCTCGTTAT
Downstream 100 bases:
>100_bases CCTATGTGAAAAAAACTGTCGTTCAAACTCATCTGGACGGCAGCATTAGAGGCAGTACCCTGTAATACGCTCATGCGGGT AACCCGGGTGAAATATCAGT
Product: DNA-binding transcriptional regulator HexR
Products: NA
Alternate protein names: Hex regulon repressor [H]
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MNTLEKIQSHLELLSKSERKVAEVILASPQTAIHSSIATLARMADVSEPTVNRFCRRLDTKGFPDFKLHLAQSLANGTPY VNRNVEEDDSVASYTGKIFESVMASLDTVKANLDIAAINRAVDLLTQAKKISFFGLGASAAVAHDAMNKFFRFNIPVVYF DDIVMQRMGCMNSSEGDVVVLISHTGRTKNLVEMAQLARENDATVIAITSRDTPLAHEATLALLLDVPEDTDVYMPMVSR IAQLTLIDVLATGFTLRRGAKFRDNLKRVKEALKESRFDKGVVIPNSFDS
Sequences:
>Translated_290_residues MNTLEKIQSHLELLSKSERKVAEVILASPQTAIHSSIATLARMADVSEPTVNRFCRRLDTKGFPDFKLHLAQSLANGTPY VNRNVEEDDSVASYTGKIFESVMASLDTVKANLDIAAINRAVDLLTQAKKISFFGLGASAAVAHDAMNKFFRFNIPVVYF DDIVMQRMGCMNSSEGDVVVLISHTGRTKNLVEMAQLARENDATVIAITSRDTPLAHEATLALLLDVPEDTDVYMPMVSR IAQLTLIDVLATGFTLRRGAKFRDNLKRVKEALKESRFDKGVVIPNSFDS >Mature_290_residues MNTLEKIQSHLELLSKSERKVAEVILASPQTAIHSSIATLARMADVSEPTVNRFCRRLDTKGFPDFKLHLAQSLANGTPY VNRNVEEDDSVASYTGKIFESVMASLDTVKANLDIAAINRAVDLLTQAKKISFFGLGASAAVAHDAMNKFFRFNIPVVYF DDIVMQRMGCMNSSEGDVVVLISHTGRTKNLVEMAQLARENDATVIAITSRDTPLAHEATLALLLDVPEDTDVYMPMVSR IAQLTLIDVLATGFTLRRGAKFRDNLKRVKEALKESRFDKGVVIPNSFDS
Specific function: Represses the expression of the hex regulon (zwf, eda, glp and gap) [H]
COG id: COG1737
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 SIS domain [H]
Homologues:
Organism=Escherichia coli, GI1788159, Length=283, Percent_Identity=84.0989399293286, Blast_Score=491, Evalue=1e-140, Organism=Escherichia coli, GI87082369, Length=240, Percent_Identity=25, Blast_Score=92, Evalue=5e-20, Organism=Escherichia coli, GI1788767, Length=262, Percent_Identity=27.4809160305344, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI87082130, Length=215, Percent_Identity=30.2325581395349, Blast_Score=80, Evalue=1e-16,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000281 - InterPro: IPR001347 - InterPro: IPR011991 [H]
Pfam domain/function: PF01418 HTH_6; PF01380 SIS [H]
EC number: NA
Molecular weight: Translated: 31994; Mature: 31994
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: PS51071 HTH_RPIR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTLEKIQSHLELLSKSERKVAEVILASPQTAIHSSIATLARMADVSEPTVNRFCRRLDT CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC KGFPDFKLHLAQSLANGTPYVNRNVEEDDSVASYTGKIFESVMASLDTVKANLDIAAINR CCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH AVDLLTQAKKISFFGLGASAAVAHDAMNKFFRFNIPVVYFDDIVMQRMGCMNSSEGDVVV HHHHHHHHHHHEEEECCHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHCCCCCCCCCEEE LISHTGRTKNLVEMAQLARENDATVIAITSRDTPLAHEATLALLLDVPEDTDVYMPMVSR EEECCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHEEEEEEECCCCCCHHHHHHHH IAQLTLIDVLATGFTLRRGAKFRDNLKRVKEALKESRFDKGVVIPNSFDS HHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHCCCCCCEECCCCCCC >Mature Secondary Structure MNTLEKIQSHLELLSKSERKVAEVILASPQTAIHSSIATLARMADVSEPTVNRFCRRLDT CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC KGFPDFKLHLAQSLANGTPYVNRNVEEDDSVASYTGKIFESVMASLDTVKANLDIAAINR CCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH AVDLLTQAKKISFFGLGASAAVAHDAMNKFFRFNIPVVYFDDIVMQRMGCMNSSEGDVVV HHHHHHHHHHHEEEECCHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHCCCCCCCCCEEE LISHTGRTKNLVEMAQLARENDATVIAITSRDTPLAHEATLALLLDVPEDTDVYMPMVSR EEECCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHEEEEEEECCCCCCHHHHHHHH IAQLTLIDVLATGFTLRRGAKFRDNLKRVKEALKESRFDKGVVIPNSFDS HHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHCCCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503; 1704005; 7567469 [H]