| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is pykA [H]
Identifier: 157371010
GI number: 157371010
Start: 3050023
End: 3051465
Strand: Direct
Name: pykA [H]
Synonym: Spro_2770
Alternate gene names: 157371010
Gene position: 3050023-3051465 (Clockwise)
Preceding gene: 157371009
Following gene: 157371014
Centisome position: 55.98
GC content: 56.69
Gene sequence:
>1443_bases ATGTCCAGACGGCTCAGAAGAACCAAAATTGTTACCACCCTGGGTCCGGCTACAGACCGCGACAATAATCTGGAAAAGAT CATTGCCGCCGGCGCTAACGTAGTTCGGCTTAACTTTTCCCACGGCACCGCAGAAGACCACCAGATCCGCGCTGACAAAG TGCGCGAAATTGCTGCCAAGTTGGGACGCCACGTCGCTATTCTGGGTGACCTGCAAGGGCCGAAAATTCGTGTTTCCACC TTTAAGGAAGGCAAAATCTTCCTTAACATCGGTGATAAATTCCTGCTTGATGCCAACATGTCCAAGGGCGAAGGCGATAA AGAAAAAGTCGGTATCGACTATAAAGGCCTGCCTGCCGACGTGGTACCCGGCGACGTACTGCTGCTCGATGACGGCCGCG TACAGCTGAAAGTGCTCGAAGTTCAGGGCATGAAAGTGTTTACCGAAGTTACCGTTGGCGGCCCACTGTCCAACAACAAA GGTATCAACAAACTGGGTGGCGGCCTGTCCGCTGAAGCCCTGACCGAGAAAGACAAGGCCGATATCGTCACCGCGGCTAA AATCGGCGTCGACTACCTGGCGGTTTCCTTCCCGCGTACCGGCGAAGATTTGAACTACGCACGTCGACTGGCGCGCGATG CCGGCTGCAACGCCAAGATCGTGTCCAAGGTTGAACGTGCCGAAGCCGTTTGCAGCGACGAAGCCATGGATGACATCATC CTGGCCTCCGACGTCGTGATGGTAGCCCGTGGCGACCTGGGCGTCGAAATCGGCGATCCGGAACTGGTCGGCATCCAGAA AAAACTGATCCGCCGTGCCCGTACGCTCAACCGCGCCGTCATTACCGCGACCCAGATGATGGAGTCGATGATCACCAACC CGATGCCTACCCGTGCCGAAGTCATGGACGTGGCAAACGCCGTGCTGGATGGTACCGACGCCGTGATGCTGTCTGCTGAA ACCGCGGCAGGCCAGTACCCGGCAGAAACCGTGGCGGCTATGGCGCGTGTTTGTCTGGGTGCAGAGAAAATCCCAAGCAT CAACGTCTCCAAACACCGTCTGGACGTGCAGTTCGACAACATTGAAGAAGCCATTGCCATGTCTTCCATGTACGCGGCTA ACCATCTGAAAGGGGTTACCGCACTGATCGCCATGACCGAGTCAGGCCGCACCGCGCTGATGATGTCACGTATCAGTTCC GGTCTGCCGATCTTCGCCATGTCACGCCATGAGCACACGTTGAACCTGACTGCGCTGTACCGCGGCGTTACGCCAGTGTA CTTCGACAGCCATAATGACGGTGTTATCGCGGCCAATGATGCGGTTAACCGCCTGCGTGATAAAGGCTTCCTGGTCTCCG GCGATCTGGTGATCGTCACCCAGGGCGACGTGATGGAAACCGTGGGTACCACCAATACCAGCCGTATTCTGCGCGTCGAG TAA
Upstream 100 bases:
>100_bases GTGAAATATCAGTGTAGTAAAATGACATTTCACTCCTGGTTTCGTTATCCGACGTTATCGCAACACCAATAATTTGCTTC ACCAGTCAACGGAGTAATAC
Downstream 100 bases:
>100_bases AATATACTGCTGCCGGCCGTTAACACGGTCGGCATTTTTTACGCTCCCCCCTTCCCCCTGAGAAACTCCCCTCTAATCGC CGTTACGGCAAATGGAGAGC
Product: pyruvate kinase
Products: NA
Alternate protein names: PK-2 [H]
Number of amino acids: Translated: 480; Mature: 479
Protein sequence:
>480_residues MSRRLRRTKIVTTLGPATDRDNNLEKIIAAGANVVRLNFSHGTAEDHQIRADKVREIAAKLGRHVAILGDLQGPKIRVST FKEGKIFLNIGDKFLLDANMSKGEGDKEKVGIDYKGLPADVVPGDVLLLDDGRVQLKVLEVQGMKVFTEVTVGGPLSNNK GINKLGGGLSAEALTEKDKADIVTAAKIGVDYLAVSFPRTGEDLNYARRLARDAGCNAKIVSKVERAEAVCSDEAMDDII LASDVVMVARGDLGVEIGDPELVGIQKKLIRRARTLNRAVITATQMMESMITNPMPTRAEVMDVANAVLDGTDAVMLSAE TAAGQYPAETVAAMARVCLGAEKIPSINVSKHRLDVQFDNIEEAIAMSSMYAANHLKGVTALIAMTESGRTALMMSRISS GLPIFAMSRHEHTLNLTALYRGVTPVYFDSHNDGVIAANDAVNRLRDKGFLVSGDLVIVTQGDVMETVGTTNTSRILRVE
Sequences:
>Translated_480_residues MSRRLRRTKIVTTLGPATDRDNNLEKIIAAGANVVRLNFSHGTAEDHQIRADKVREIAAKLGRHVAILGDLQGPKIRVST FKEGKIFLNIGDKFLLDANMSKGEGDKEKVGIDYKGLPADVVPGDVLLLDDGRVQLKVLEVQGMKVFTEVTVGGPLSNNK GINKLGGGLSAEALTEKDKADIVTAAKIGVDYLAVSFPRTGEDLNYARRLARDAGCNAKIVSKVERAEAVCSDEAMDDII LASDVVMVARGDLGVEIGDPELVGIQKKLIRRARTLNRAVITATQMMESMITNPMPTRAEVMDVANAVLDGTDAVMLSAE TAAGQYPAETVAAMARVCLGAEKIPSINVSKHRLDVQFDNIEEAIAMSSMYAANHLKGVTALIAMTESGRTALMMSRISS GLPIFAMSRHEHTLNLTALYRGVTPVYFDSHNDGVIAANDAVNRLRDKGFLVSGDLVIVTQGDVMETVGTTNTSRILRVE >Mature_479_residues SRRLRRTKIVTTLGPATDRDNNLEKIIAAGANVVRLNFSHGTAEDHQIRADKVREIAAKLGRHVAILGDLQGPKIRVSTF KEGKIFLNIGDKFLLDANMSKGEGDKEKVGIDYKGLPADVVPGDVLLLDDGRVQLKVLEVQGMKVFTEVTVGGPLSNNKG INKLGGGLSAEALTEKDKADIVTAAKIGVDYLAVSFPRTGEDLNYARRLARDAGCNAKIVSKVERAEAVCSDEAMDDIIL ASDVVMVARGDLGVEIGDPELVGIQKKLIRRARTLNRAVITATQMMESMITNPMPTRAEVMDVANAVLDGTDAVMLSAET AAGQYPAETVAAMARVCLGAEKIPSINVSKHRLDVQFDNIEEAIAMSSMYAANHLKGVTALIAMTESGRTALMMSRISSG LPIFAMSRHEHTLNLTALYRGVTPVYFDSHNDGVIAANDAVNRLRDKGFLVSGDLVIVTQGDVMETVGTTNTSRILRVE
Specific function: Glycolysis; final step. [C]
COG id: COG0469
COG function: function code G; Pyruvate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pyruvate kinase family [H]
Homologues:
Organism=Homo sapiens, GI33286422, Length=502, Percent_Identity=38.0478087649402, Blast_Score=259, Evalue=4e-69, Organism=Homo sapiens, GI33286420, Length=502, Percent_Identity=38.0478087649402, Blast_Score=259, Evalue=4e-69, Organism=Homo sapiens, GI33286418, Length=495, Percent_Identity=37.3737373737374, Blast_Score=251, Evalue=1e-66, Organism=Homo sapiens, GI10835121, Length=495, Percent_Identity=35.5555555555556, Blast_Score=238, Evalue=1e-62, Organism=Homo sapiens, GI32967597, Length=495, Percent_Identity=35.5555555555556, Blast_Score=238, Evalue=1e-62, Organism=Homo sapiens, GI310128732, Length=290, Percent_Identity=36.2068965517241, Blast_Score=146, Evalue=4e-35, Organism=Homo sapiens, GI310128730, Length=290, Percent_Identity=36.2068965517241, Blast_Score=146, Evalue=4e-35, Organism=Homo sapiens, GI310128736, Length=237, Percent_Identity=35.4430379746835, Blast_Score=113, Evalue=3e-25, Organism=Homo sapiens, GI310128734, Length=237, Percent_Identity=35.4430379746835, Blast_Score=113, Evalue=3e-25, Organism=Homo sapiens, GI310128738, Length=216, Percent_Identity=35.1851851851852, Blast_Score=97, Evalue=4e-20, Organism=Escherichia coli, GI1788160, Length=480, Percent_Identity=92.0833333333333, Blast_Score=901, Evalue=0.0, Organism=Escherichia coli, GI1787965, Length=483, Percent_Identity=38.0952380952381, Blast_Score=288, Evalue=7e-79, Organism=Caenorhabditis elegans, GI17544584, Length=492, Percent_Identity=36.3821138211382, Blast_Score=263, Evalue=1e-70, Organism=Caenorhabditis elegans, GI17506831, Length=495, Percent_Identity=37.3737373737374, Blast_Score=241, Evalue=8e-64, Organism=Caenorhabditis elegans, GI71984413, Length=495, Percent_Identity=37.3737373737374, Blast_Score=241, Evalue=9e-64, Organism=Caenorhabditis elegans, GI71984406, Length=495, Percent_Identity=37.3737373737374, Blast_Score=240, Evalue=1e-63, Organism=Caenorhabditis elegans, GI17506829, Length=495, Percent_Identity=37.3737373737374, Blast_Score=240, Evalue=1e-63, Organism=Saccharomyces cerevisiae, GI6319279, Length=473, Percent_Identity=35.7293868921776, Blast_Score=249, Evalue=7e-67, Organism=Saccharomyces cerevisiae, GI6324923, Length=496, Percent_Identity=34.6774193548387, Blast_Score=249, Evalue=7e-67, Organism=Drosophila melanogaster, GI28571814, Length=494, Percent_Identity=37.246963562753, Blast_Score=266, Evalue=2e-71, Organism=Drosophila melanogaster, GI24648964, Length=494, Percent_Identity=37.246963562753, Blast_Score=266, Evalue=2e-71, Organism=Drosophila melanogaster, GI24648966, Length=454, Percent_Identity=33.920704845815, Blast_Score=231, Evalue=6e-61, Organism=Drosophila melanogaster, GI24581235, Length=436, Percent_Identity=32.5688073394495, Blast_Score=218, Evalue=1e-56, Organism=Drosophila melanogaster, GI24646914, Length=270, Percent_Identity=35.1851851851852, Blast_Score=143, Evalue=2e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001697 - InterPro: IPR015813 - InterPro: IPR011037 - InterPro: IPR015794 - InterPro: IPR018209 - InterPro: IPR015793 - InterPro: IPR015795 - InterPro: IPR015806 [H]
Pfam domain/function: PF00224 PK; PF02887 PK_C [H]
EC number: =2.7.1.40 [H]
Molecular weight: Translated: 51636; Mature: 51505
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: PS00110 PYRUVATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRRLRRTKIVTTLGPATDRDNNLEKIIAAGANVVRLNFSHGTAEDHQIRADKVREIAAK CCCCCCHHEEEEEECCCCCCCCCHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHH LGRHVAILGDLQGPKIRVSTFKEGKIFLNIGDKFLLDANMSKGEGDKEKVGIDYKGLPAD HCCEEEEEECCCCCEEEEEEEECCEEEEEECCEEEEECCCCCCCCCCHHCCCCCCCCCCC VVPGDVLLLDDGRVQLKVLEVQGMKVFTEVTVGGPLSNNKGINKLGGGLSAEALTEKDKA CCCCCEEEEECCCEEEEEEEECCEEEEEEEEECCCCCCCCCCHHHCCCCCHHHHCCCCHH DIVTAAKIGVDYLAVSFPRTGEDLNYARRLARDAGCNAKIVSKVERAEAVCSDEAMDDII CEEEEHHHCCEEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHCCH LASDVVMVARGDLGVEIGDPELVGIQKKLIRRARTLNRAVITATQMMESMITNPMPTRAE HHCCEEEEEECCCCEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH VMDVANAVLDGTDAVMLSAETAAGQYPAETVAAMARVCLGAEKIPSINVSKHRLDVQFDN HHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCHHHCCCCCCCCEEEEEEECC IEEAIAMSSMYAANHLKGVTALIAMTESGRTALMMSRISSGLPIFAMSRHEHTLNLTALY HHHHHHHHHHHHHHHHCCEEEEEEEECCCCHHHHHHHHCCCCCEEEECCCCCEEEEEEHC RGVTPVYFDSHNDGVIAANDAVNRLRDKGFLVSGDLVIVTQGDVMETVGTTNTSRILRVE CCCCEEEEECCCCCEEEECHHHHHHHHCCEEEECCEEEEECCCHHHHCCCCCCCEEEEEC >Mature Secondary Structure SRRLRRTKIVTTLGPATDRDNNLEKIIAAGANVVRLNFSHGTAEDHQIRADKVREIAAK CCCCCHHEEEEEECCCCCCCCCHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHH LGRHVAILGDLQGPKIRVSTFKEGKIFLNIGDKFLLDANMSKGEGDKEKVGIDYKGLPAD HCCEEEEEECCCCCEEEEEEEECCEEEEEECCEEEEECCCCCCCCCCHHCCCCCCCCCCC VVPGDVLLLDDGRVQLKVLEVQGMKVFTEVTVGGPLSNNKGINKLGGGLSAEALTEKDKA CCCCCEEEEECCCEEEEEEEECCEEEEEEEEECCCCCCCCCCHHHCCCCCHHHHCCCCHH DIVTAAKIGVDYLAVSFPRTGEDLNYARRLARDAGCNAKIVSKVERAEAVCSDEAMDDII CEEEEHHHCCEEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHCCH LASDVVMVARGDLGVEIGDPELVGIQKKLIRRARTLNRAVITATQMMESMITNPMPTRAE HHCCEEEEEECCCCEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH VMDVANAVLDGTDAVMLSAETAAGQYPAETVAAMARVCLGAEKIPSINVSKHRLDVQFDN HHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCHHHCCCCCCCCEEEEEEECC IEEAIAMSSMYAANHLKGVTALIAMTESGRTALMMSRISSGLPIFAMSRHEHTLNLTALY HHHHHHHHHHHHHHHHCCEEEEEEEECCCCHHHHHHHHCCCCCEEEECCCCCEEEEEEHC RGVTPVYFDSHNDGVIAANDAVNRLRDKGFLVSGDLVIVTQGDVMETVGTTNTSRILRVE CCCCEEEEECCCCCEEEECHHHHHHHHCCEEEECCEEEEECCCHHHHCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503; 1732206; 1859631; 8439398 [H]