| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is mdtL [H]
Identifier: 157370984
GI number: 157370984
Start: 3023095
End: 3024288
Strand: Direct
Name: mdtL [H]
Synonym: Spro_2744
Alternate gene names: 157370984
Gene position: 3023095-3024288 (Clockwise)
Preceding gene: 157370983
Following gene: 157370987
Centisome position: 55.48
GC content: 59.3
Gene sequence:
>1194_bases ATGCAAAAATTTCTGTTTCTGCTTCTTAGCCTGGTGCTGCTCGGCCCGCTGGGTATCGATCTCTATCTGCCGACCATCCC CGCTATCGCCGTTGGCCTTAACAGCAGTGAAGCGCTGATTCAGTCCACCATTTCTCTGTTCATTTTGGTGCTGGGCCTTG GGCAGGTTATTGCCGGCCCGCTGGTGGATAACTACGGCCGCAAGCCGGTGGCTCTGGCCGGTATTGTGATTTACATGATT GGCGCGGCGATGGCGGCGCTGGCCACCACGCCAACGATGTTTGTCGCCTCTCGCCTGTTGCAGGGTGTGGCGGTCTGCTG TACCGCAGTGGTGGCATTCAGTGGCGTGCGCGATCGGATGAACGGCGACGATGCGGCCCGTGCCTTCGGTTTTCTCAACG GTACGCTGAATATTATTCCTGCTCTGGCCCCCTTGCTGGGCGGGTTGCTGGCAGAAGCCTTTGGCTGGCGCGCCCCATTC TGGTTCCTGGTGTGTTATGCGCTGGCGGTACTGGTACTGATCGCCCTTCGCCTGCCGGAAACCCGTCCGGCGGACACCGT GCGCGTCAAAGGATTGCCGGTGCGACAATATGCACGCATCGCCCGCGATCGCCGCTTTCTGTCCTTCGCCGTAGTCAACT CCGGTGCCATGGGCATGGCGCTGACCTACGTCTCGCTGGCCCCCAACGTGCTAATGGGCACCGCCGGGCTGACGCCGTTG CAATTCTCGTTGGTGTTTGGCGCCAATGGTTTTTGGATCATGCTGGTGAGTTTTTTCGCCAACCGCATCATTCACAAGGT CGGACGCCCAGTCTGTCTGGCAACCGGCGGTATATTGATGGGTATCGGGGCTATTGGGCTACTGCTGGGCGTCTCCTTAC TGTCTGGTGCGGCACAAACTCACTGGCTGGCTTATATGCTACCGGTCGCTTTTGCCTGCGCTGGTTTAGCCTTTGTGATG GGCCCGGCAACCAGCTACGCGCTGGAGCCGTATTCCAATGAGGCCGGGGTAGCTTCTGCATTGGTAGGTTTTGTGCAGAT GGCCGGCGGTGCGGCTCTGGGCTTGTTGGCGATGGCGCTGCCATTGCAGCCCAAACTGTCACTGGCGCTGGTGATGCTGG TGGGTTGCCTGCTAGCGCTGCACGCACGACAGCGCAGCAAGCAAATAAAAGGTCAGTTGAAGAAGATTGCCTGA
Upstream 100 bases:
>100_bases GACTGGCGTACCGGCGGCGGGCCTATGTTTTGCCTCTTTCCATTTAGCGCCAGAATCTCTACTCTAGCCCTCTTTGTCAC TCGGATGTGCTGTTTTTGTT
Downstream 100 bases:
>100_bases GGCTTAGGCCTCGGTGTTGATTGGCACTCTAGCGGCCAGTGCCGTCAGTAATTCATAACCCAGCGTACCTGCCGCGGTGG CGACATCGTCAACCGGCAGG
Product: Bcr/CflA subfamily drug resistance transporter
Products: Proton [Cytoplasm]; drug [Periplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 397; Mature: 397
Protein sequence:
>397_residues MQKFLFLLLSLVLLGPLGIDLYLPTIPAIAVGLNSSEALIQSTISLFILVLGLGQVIAGPLVDNYGRKPVALAGIVIYMI GAAMAALATTPTMFVASRLLQGVAVCCTAVVAFSGVRDRMNGDDAARAFGFLNGTLNIIPALAPLLGGLLAEAFGWRAPF WFLVCYALAVLVLIALRLPETRPADTVRVKGLPVRQYARIARDRRFLSFAVVNSGAMGMALTYVSLAPNVLMGTAGLTPL QFSLVFGANGFWIMLVSFFANRIIHKVGRPVCLATGGILMGIGAIGLLLGVSLLSGAAQTHWLAYMLPVAFACAGLAFVM GPATSYALEPYSNEAGVASALVGFVQMAGGAALGLLAMALPLQPKLSLALVMLVGCLLALHARQRSKQIKGQLKKIA
Sequences:
>Translated_397_residues MQKFLFLLLSLVLLGPLGIDLYLPTIPAIAVGLNSSEALIQSTISLFILVLGLGQVIAGPLVDNYGRKPVALAGIVIYMI GAAMAALATTPTMFVASRLLQGVAVCCTAVVAFSGVRDRMNGDDAARAFGFLNGTLNIIPALAPLLGGLLAEAFGWRAPF WFLVCYALAVLVLIALRLPETRPADTVRVKGLPVRQYARIARDRRFLSFAVVNSGAMGMALTYVSLAPNVLMGTAGLTPL QFSLVFGANGFWIMLVSFFANRIIHKVGRPVCLATGGILMGIGAIGLLLGVSLLSGAAQTHWLAYMLPVAFACAGLAFVM GPATSYALEPYSNEAGVASALVGFVQMAGGAALGLLAMALPLQPKLSLALVMLVGCLLALHARQRSKQIKGQLKKIA >Mature_397_residues MQKFLFLLLSLVLLGPLGIDLYLPTIPAIAVGLNSSEALIQSTISLFILVLGLGQVIAGPLVDNYGRKPVALAGIVIYMI GAAMAALATTPTMFVASRLLQGVAVCCTAVVAFSGVRDRMNGDDAARAFGFLNGTLNIIPALAPLLGGLLAEAFGWRAPF WFLVCYALAVLVLIALRLPETRPADTVRVKGLPVRQYARIARDRRFLSFAVVNSGAMGMALTYVSLAPNVLMGTAGLTPL QFSLVFGANGFWIMLVSFFANRIIHKVGRPVCLATGGILMGIGAIGLLLGVSLLSGAAQTHWLAYMLPVAFACAGLAFVM GPATSYALEPYSNEAGVASALVGFVQMAGGAALGLLAMALPLQPKLSLALVMLVGCLLALHARQRSKQIKGQLKKIA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. DHA1 family. MdtL (TC 2.A.1.2.22) subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790146, Length=351, Percent_Identity=34.1880341880342, Blast_Score=172, Evalue=3e-44, Organism=Escherichia coli, GI1788509, Length=405, Percent_Identity=26.9135802469136, Blast_Score=125, Evalue=7e-30, Organism=Escherichia coli, GI87082312, Length=354, Percent_Identity=30.225988700565, Blast_Score=111, Evalue=1e-25, Organism=Escherichia coli, GI48994889, Length=206, Percent_Identity=32.0388349514563, Blast_Score=95, Evalue=6e-21, Organism=Escherichia coli, GI1790794, Length=238, Percent_Identity=27.3109243697479, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI1787065, Length=206, Percent_Identity=26.2135922330097, Blast_Score=67, Evalue=3e-12, Organism=Escherichia coli, GI87081738, Length=193, Percent_Identity=26.4248704663212, Blast_Score=65, Evalue=5e-12, Organism=Saccharomyces cerevisiae, GI6324264, Length=171, Percent_Identity=27.4853801169591, Blast_Score=75, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6319517, Length=188, Percent_Identity=25.531914893617, Blast_Score=67, Evalue=7e-12, Organism=Saccharomyces cerevisiae, GI6322071, Length=164, Percent_Identity=30.4878048780488, Blast_Score=64, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6319480, Length=206, Percent_Identity=25.2427184466019, Blast_Score=64, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 41569; Mature: 41569
Theoretical pI: Translated: 10.34; Mature: 10.34
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKFLFLLLSLVLLGPLGIDLYLPTIPAIAVGLNSSEALIQSTISLFILVLGLGQVIAGP CHHHHHHHHHHHHHCCCCCHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LVDNYGRKPVALAGIVIYMIGAAMAALATTPTMFVASRLLQGVAVCCTAVVAFSGVRDRM HHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NGDDAARAFGFLNGTLNIIPALAPLLGGLLAEAFGWRAPFWFLVCYALAVLVLIALRLPE CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC TRPADTVRVKGLPVRQYARIARDRRFLSFAVVNSGAMGMALTYVSLAPNVLMGTAGLTPL CCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHCCCCCCCHH QFSLVFGANGFWIMLVSFFANRIIHKVGRPVCLATGGILMGIGAIGLLLGVSLLSGAAQT EEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHCHHHH HWLAYMLPVAFACAGLAFVMGPATSYALEPYSNEAGVASALVGFVQMAGGAALGLLAMAL HHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHC PLQPKLSLALVMLVGCLLALHARQRSKQIKGQLKKIA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MQKFLFLLLSLVLLGPLGIDLYLPTIPAIAVGLNSSEALIQSTISLFILVLGLGQVIAGP CHHHHHHHHHHHHHCCCCCHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LVDNYGRKPVALAGIVIYMIGAAMAALATTPTMFVASRLLQGVAVCCTAVVAFSGVRDRM HHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NGDDAARAFGFLNGTLNIIPALAPLLGGLLAEAFGWRAPFWFLVCYALAVLVLIALRLPE CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC TRPADTVRVKGLPVRQYARIARDRRFLSFAVVNSGAMGMALTYVSLAPNVLMGTAGLTPL CCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHCCCCCCCHH QFSLVFGANGFWIMLVSFFANRIIHKVGRPVCLATGGILMGIGAIGLLLGVSLLSGAAQT EEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHCHHHH HWLAYMLPVAFACAGLAFVMGPATSYALEPYSNEAGVASALVGFVQMAGGAALGLLAMAL HHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHC PLQPKLSLALVMLVGCLLALHARQRSKQIKGQLKKIA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; drug [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + drug [Cytoplasm] = Proton [Cytoplasm] + drug [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA