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The map label for this gene is ycgB [H]

Identifier: 157370987

GI number: 157370987

Start: 3027281

End: 3028816

Strand: Direct

Name: ycgB [H]

Synonym: Spro_2747

Alternate gene names: 157370987

Gene position: 3027281-3028816 (Clockwise)

Preceding gene: 157370984

Following gene: 157370989

Centisome position: 55.56

GC content: 52.08

Gene sequence:

>1536_bases
ATGACTACTTCAACACATGATAAGGTCAAGGAAGATAAACGTCTGAGCGATGGACCGGACTGGACGTTCGAGTTGCTGCA
GGTGTATCTGGAGCACATCGATCGCGTAGCCAAACATTACAAGCTCGACACCTACCCGCATCAGATCGAGGTCATTACCT
CAGAGCAGATGATGGACGCTTATTCCAGCGTCGGCATGCCGATTAACTACACCCATTGGTCATTCGGTAAAAAATTCATT
GAGACCGAGCAGCGCTATAAGCATGGGCAACAGGGCCTGGCCTATGAGATTGTGATCAACTCCAACCCCTGCATCGCCTA
CCTGATGGAAGAAAACACCATCACCATGCAGGCTTTGGTGATGGCGCACGCCTGCTATGGGCACAATTCCTTCTTCAAGA
ATAACTACCTGTTCCGCAGTTGGACCGACGCCAGTTCGATTGTCGATTACCTGCTGTTCGCCCGCCACTACATCAGCCAG
TGCGAAGAGCGCTACGGCGTTGAAGAGGTGGAGAGGCTGCTGGACTCTTGCCATGCGTTGATGAACTACGGCGTGGACCG
TTACAAACGGCCGCAGAAAATTTCACTGGTCGAAGAAACTGCCCGGCAAAAAAGCCGCGAAGAGTACCTGCAAAGCCAGG
TAAACACGCTGTGGAAGACCCTGCCACGGGTTGAACGTGAAGAGGCACCTGAGCAGGCGCGCCGCTATCCGAGCGAACCT
CAGGAAAACATCCTCTACTTTATGGAGAAGAATGCTCCGTTGCTGGAACCCTGGCAGCGTGAGATTCTGCGAATTGTGCG
CAAAGTGAGTCAGTATTTTTATCCGCAGAAACAAACCCAGGTGATGAACGAAGGCTGGGCGACATTCTGGCACTACACCA
TCCTCAATCATCTGTACGACGAGGGCCGGGTAACCGAACGTTTTATGCTGGAATTTTTGCACAGCCATACCAACGTGGTT
TATCAACCGCCTTACAATAGCCCTTATTACAACGGCATTAACCCTTACGCACTGGGCTTTGCCATGTTCCAGGACATCAA
GCGCATCTGCCAGTCGCCGACGGAAGAAGATCGTTACTGGTTCCCGGACATCGCCGGTAAAGACTGGCTGGAAACACTTC
ACTTCGCCATGCGTGACTTCAAGGATGAAAGCTTTATCAGCCAGTTCCTGTCGCCGAAGATCATGCGTGATTTCCGGCTA
TTCACCGTGCTGGATGACGATCGCAATAACTACCTTGAAATAGCTGCGATCCATGATGAAGCCGGTTACCGCGCAATCCG
TCAGGAGCTGTCGGCGCAATATAATCTGAGCGACCACGAACCGAACATACAGATCTGGAATGTAGATTTACGCGGTGACC
GTTCATTAACGTTGCGTTATATCCCGCAGGATCGCGCCCCGCTGGATAAAAGTCGGCGTGAAGTGATGAAACACCTGCAC
CGTCTGTGGGGCTTCGACATTATTTTGGAGCAACAGAACGAAGACGGCAGCGTCGAGCTATTGGAGCGTTGCCCACCGCG
CCCAACACCACTGTAA

Upstream 100 bases:

>100_bases
ATTTTTAAGCTTTATATCATTATTACCTCTGCGTAGATTGAGCTACGATTGATACAGGGTCTGCCGTTCGAGCAAGGTCC
GTAATAACGAGGGTGCGCTG

Downstream 100 bases:

>100_bases
GACTGTTCAATAACTAAAAACTAAAGGGGCGCCAAATGGCGCCCCTTTTACGTAATGCGGTGTTGAGGTTAACGACGGGC
TTCGGTCAGATCGCTTGGCA

Product: SpoVR family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 511; Mature: 510

Protein sequence:

>511_residues
MTTSTHDKVKEDKRLSDGPDWTFELLQVYLEHIDRVAKHYKLDTYPHQIEVITSEQMMDAYSSVGMPINYTHWSFGKKFI
ETEQRYKHGQQGLAYEIVINSNPCIAYLMEENTITMQALVMAHACYGHNSFFKNNYLFRSWTDASSIVDYLLFARHYISQ
CEERYGVEEVERLLDSCHALMNYGVDRYKRPQKISLVEETARQKSREEYLQSQVNTLWKTLPRVEREEAPEQARRYPSEP
QENILYFMEKNAPLLEPWQREILRIVRKVSQYFYPQKQTQVMNEGWATFWHYTILNHLYDEGRVTERFMLEFLHSHTNVV
YQPPYNSPYYNGINPYALGFAMFQDIKRICQSPTEEDRYWFPDIAGKDWLETLHFAMRDFKDESFISQFLSPKIMRDFRL
FTVLDDDRNNYLEIAAIHDEAGYRAIRQELSAQYNLSDHEPNIQIWNVDLRGDRSLTLRYIPQDRAPLDKSRREVMKHLH
RLWGFDIILEQQNEDGSVELLERCPPRPTPL

Sequences:

>Translated_511_residues
MTTSTHDKVKEDKRLSDGPDWTFELLQVYLEHIDRVAKHYKLDTYPHQIEVITSEQMMDAYSSVGMPINYTHWSFGKKFI
ETEQRYKHGQQGLAYEIVINSNPCIAYLMEENTITMQALVMAHACYGHNSFFKNNYLFRSWTDASSIVDYLLFARHYISQ
CEERYGVEEVERLLDSCHALMNYGVDRYKRPQKISLVEETARQKSREEYLQSQVNTLWKTLPRVEREEAPEQARRYPSEP
QENILYFMEKNAPLLEPWQREILRIVRKVSQYFYPQKQTQVMNEGWATFWHYTILNHLYDEGRVTERFMLEFLHSHTNVV
YQPPYNSPYYNGINPYALGFAMFQDIKRICQSPTEEDRYWFPDIAGKDWLETLHFAMRDFKDESFISQFLSPKIMRDFRL
FTVLDDDRNNYLEIAAIHDEAGYRAIRQELSAQYNLSDHEPNIQIWNVDLRGDRSLTLRYIPQDRAPLDKSRREVMKHLH
RLWGFDIILEQQNEDGSVELLERCPPRPTPL
>Mature_510_residues
TTSTHDKVKEDKRLSDGPDWTFELLQVYLEHIDRVAKHYKLDTYPHQIEVITSEQMMDAYSSVGMPINYTHWSFGKKFIE
TEQRYKHGQQGLAYEIVINSNPCIAYLMEENTITMQALVMAHACYGHNSFFKNNYLFRSWTDASSIVDYLLFARHYISQC
EERYGVEEVERLLDSCHALMNYGVDRYKRPQKISLVEETARQKSREEYLQSQVNTLWKTLPRVEREEAPEQARRYPSEPQ
ENILYFMEKNAPLLEPWQREILRIVRKVSQYFYPQKQTQVMNEGWATFWHYTILNHLYDEGRVTERFMLEFLHSHTNVVY
QPPYNSPYYNGINPYALGFAMFQDIKRICQSPTEEDRYWFPDIAGKDWLETLHFAMRDFKDESFISQFLSPKIMRDFRLF
TVLDDDRNNYLEIAAIHDEAGYRAIRQELSAQYNLSDHEPNIQIWNVDLRGDRSLTLRYIPQDRAPLDKSRREVMKHLHR
LWGFDIILEQQNEDGSVELLERCPPRPTPL

Specific function: Unknown

COG id: COG2719

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis spoVR [H]

Homologues:

Organism=Escherichia coli, GI1787437, Length=498, Percent_Identity=88.1526104417671, Blast_Score=940, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007390 [H]

Pfam domain/function: PF04293 SpoVR [H]

EC number: NA

Molecular weight: Translated: 61011; Mature: 60879

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTSTHDKVKEDKRLSDGPDWTFELLQVYLEHIDRVAKHYKLDTYPHQIEVITSEQMMDA
CCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHH
YSSVGMPINYTHWSFGKKFIETEQRYKHGQQGLAYEIVINSNPCIAYLMEENTITMQALV
HHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEECCCHHHHHHH
MAHACYGHNSFFKNNYLFRSWTDASSIVDYLLFARHYISQCEERYGVEEVERLLDSCHAL
HHHHHHCCCHHHCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
MNYGVDRYKRPQKISLVEETARQKSREEYLQSQVNTLWKTLPRVEREEAPEQARRYPSEP
HHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCC
QENILYFMEKNAPLLEPWQREILRIVRKVSQYFYPQKQTQVMNEGWATFWHYTILNHLYD
HHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHH
EGRVTERFMLEFLHSHTNVVYQPPYNSPYYNGINPYALGFAMFQDIKRICQSPTEEDRYW
CCCHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEE
FPDIAGKDWLETLHFAMRDFKDESFISQFLSPKIMRDFRLFTVLDDDRNNYLEIAAIHDE
CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHEEEEEEECCCCCEEEEEEEECH
AGYRAIRQELSAQYNLSDHEPNIQIWNVDLRGDRSLTLRYIPQDRAPLDKSRREVMKHLH
HHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCEEEEECCCCCCCCCHHHHHHHHHHH
RLWGFDIILEQQNEDGSVELLERCPPRPTPL
HHHCCEEEEECCCCCCCHHHHHHCCCCCCCC
>Mature Secondary Structure 
TTSTHDKVKEDKRLSDGPDWTFELLQVYLEHIDRVAKHYKLDTYPHQIEVITSEQMMDA
CCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHH
YSSVGMPINYTHWSFGKKFIETEQRYKHGQQGLAYEIVINSNPCIAYLMEENTITMQALV
HHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEECCCHHHHHHH
MAHACYGHNSFFKNNYLFRSWTDASSIVDYLLFARHYISQCEERYGVEEVERLLDSCHAL
HHHHHHCCCHHHCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
MNYGVDRYKRPQKISLVEETARQKSREEYLQSQVNTLWKTLPRVEREEAPEQARRYPSEP
HHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCC
QENILYFMEKNAPLLEPWQREILRIVRKVSQYFYPQKQTQVMNEGWATFWHYTILNHLYD
HHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHH
EGRVTERFMLEFLHSHTNVVYQPPYNSPYYNGINPYALGFAMFQDIKRICQSPTEEDRYW
CCCHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEE
FPDIAGKDWLETLHFAMRDFKDESFISQFLSPKIMRDFRLFTVLDDDRNNYLEIAAIHDE
CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHEEEEEEECCCCCEEEEEEEECH
AGYRAIRQELSAQYNLSDHEPNIQIWNVDLRGDRSLTLRYIPQDRAPLDKSRREVMKHLH
HHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCEEEEECCCCCCCCCHHHHHHHHHHH
RLWGFDIILEQQNEDGSVELLERCPPRPTPL
HHHCCEEEEECCCCCCCHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 7906689 [H]