| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is yeaD [H]
Identifier: 157370969
GI number: 157370969
Start: 3005737
End: 3006612
Strand: Direct
Name: yeaD [H]
Synonym: Spro_2729
Alternate gene names: 157370969
Gene position: 3005737-3006612 (Clockwise)
Preceding gene: 157370968
Following gene: 157370971
Centisome position: 55.16
GC content: 55.59
Gene sequence:
>876_bases ATGAACGAAAAGATTTTCACCCTACCCGTTACCGAACAAATTTCCCCTTTTATCAGTCAGCGCCAGCTCGATGAACTGCC TGTCGTAGTGGTTTCCCATCCGAAAGTGCGTGCCGCTATCTCACTTCAGGGTGCGCATCTGTTGGCCTGGCAACCTAGCG GTGAAAAACCGGTTATTTGGCTGAGCAACAACACCCCCTTTAAAAAGGGCAATGCCATCCGTGGCGGCGTGCCTATCTGC TGGCCCTGGTTTGGCCCGGTAGCAAAACCTTCACACGGTTTCGCACGCAATCAGCCGTGGACTCTGACCGCGCATGATGA AGACGACAACGGCGTTATTCTGACCTTCACGCTGAAAGACAATGAGCAGACCCGCAGCCTGTGGCCACATGCCTTTACGC TGATTGCCCGCTTCAAACTGGGTGAGGAATGCGAAATAGAGCTGGAATCCCACGGCGACTATCAGGCGACCGCGGCGTTG CACACCTACTTCCAGATCGGTGATATCGGGCAGGTTAAAGTTGCCGGGCTCGGCGAACCCTATATCGATAAGGTTGCCGG CGGCGCAGAAGCTCGCCAGGTGGGTGACGTGACCTTTGTCGGCCAGACCGACCGGGTTTATACCCAGCCGGACGCCTTCA GTCTGATCAAAGATGCGGCGCAACAACGCACCATTGAGGTTCATCACCATCACATGAGTGACGTGATTGCCTGGAATCCC GGCGTGGAGCTTTCTTGCAGCATGGCGGATATGCCAAATGACGGTTATAAAACCATGGTTTGCGTAGAAACCGGTCGCGT CAGTAAACCCCTGGTGGCAGCCGGTGAACAACCGGCCCGGCTGGCAGTGACCTTCCGTGTTCGTAACAACGGCTGA
Upstream 100 bases:
>100_bases TCGCTCACATCTCCAAATAATGGATTGATGTTAAGCTGATGATGAGGGTGACATTTTTGTCACCCTTTTTTTGTTTCTAC GGCGAACAAAAGGCAACCCG
Downstream 100 bases:
>100_bases TCCCTTTTAAGTGCAGTAAAGACTTGCTGCGCTACAGATGTGCAAAAGGGGCGCCAGCGCCCCTTTATGATGCCTACATT GCACAACATTGGTGCAGGCT
Product: aldose 1-epimerase
Products: NA
Alternate protein names: Putative D-hexose-6-phosphate mutarotase; Unknown protein from 2D-page spots T26/PR37 [H]
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MNEKIFTLPVTEQISPFISQRQLDELPVVVVSHPKVRAAISLQGAHLLAWQPSGEKPVIWLSNNTPFKKGNAIRGGVPIC WPWFGPVAKPSHGFARNQPWTLTAHDEDDNGVILTFTLKDNEQTRSLWPHAFTLIARFKLGEECEIELESHGDYQATAAL HTYFQIGDIGQVKVAGLGEPYIDKVAGGAEARQVGDVTFVGQTDRVYTQPDAFSLIKDAAQQRTIEVHHHHMSDVIAWNP GVELSCSMADMPNDGYKTMVCVETGRVSKPLVAAGEQPARLAVTFRVRNNG
Sequences:
>Translated_291_residues MNEKIFTLPVTEQISPFISQRQLDELPVVVVSHPKVRAAISLQGAHLLAWQPSGEKPVIWLSNNTPFKKGNAIRGGVPIC WPWFGPVAKPSHGFARNQPWTLTAHDEDDNGVILTFTLKDNEQTRSLWPHAFTLIARFKLGEECEIELESHGDYQATAAL HTYFQIGDIGQVKVAGLGEPYIDKVAGGAEARQVGDVTFVGQTDRVYTQPDAFSLIKDAAQQRTIEVHHHHMSDVIAWNP GVELSCSMADMPNDGYKTMVCVETGRVSKPLVAAGEQPARLAVTFRVRNNG >Mature_291_residues MNEKIFTLPVTEQISPFISQRQLDELPVVVVSHPKVRAAISLQGAHLLAWQPSGEKPVIWLSNNTPFKKGNAIRGGVPIC WPWFGPVAKPSHGFARNQPWTLTAHDEDDNGVILTFTLKDNEQTRSLWPHAFTLIARFKLGEECEIELESHGDYQATAAL HTYFQIGDIGQVKVAGLGEPYIDKVAGGAEARQVGDVTFVGQTDRVYTQPDAFSLIKDAAQQRTIEVHHHHMSDVIAWNP GVELSCSMADMPNDGYKTMVCVETGRVSKPLVAAGEQPARLAVTFRVRNNG
Specific function: Unknown
COG id: COG0676
COG function: function code G; Uncharacterized enzymes related to aldose 1-epimerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Glucose-6-phosphate 1-epimerase family [H]
Homologues:
Organism=Escherichia coli, GI87081973, Length=291, Percent_Identity=57.7319587628866, Blast_Score=355, Evalue=1e-99, Organism=Saccharomyces cerevisiae, GI6323746, Length=263, Percent_Identity=30.0380228136882, Blast_Score=105, Evalue=7e-24, Organism=Drosophila melanogaster, GI19921284, Length=249, Percent_Identity=32.5301204819277, Blast_Score=125, Evalue=2e-29, Organism=Drosophila melanogaster, GI28574481, Length=164, Percent_Identity=31.0975609756098, Blast_Score=87, Evalue=1e-17,
Paralogues:
None
Copy number: 560 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008183 - InterPro: IPR011013 - InterPro: IPR014718 [H]
Pfam domain/function: PF01263 Aldose_epim [H]
EC number: =5.1.3.15 [H]
Molecular weight: Translated: 32100; Mature: 32100
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEKIFTLPVTEQISPFISQRQLDELPVVVVSHPKVRAAISLQGAHLLAWQPSGEKPVIW CCCEEEEEECHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEECCCEEEEECCCCCCCEEE LSNNTPFKKGNAIRGGVPICWPWFGPVAKPSHGFARNQPWTLTAHDEDDNGVILTFTLKD ECCCCCCCCCCEEECCCCEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECC NEQTRSLWPHAFTLIARFKLGEECEIELESHGDYQATAALHTYFQIGDIGQVKVAGLGEP CCCHHHHCHHHEEHHHHHCCCCEEEEEECCCCCEEEEEEEEEEEEECCCCEEEEEECCCH YIDKVAGGAEARQVGDVTFVGQTDRVYTQPDAFSLIKDAAQQRTIEVHHHHMSDVIAWNP HHHHHCCCCCHHCCCCEEEECCCCCEEECCCHHHHHHHHHHHCEEEEEECCCCCEEEECC GVELSCSMADMPNDGYKTMVCVETGRVSKPLVAAGEQPARLAVTFRVRNNG CCEEEEEECCCCCCCCEEEEEEECCCCCCCCEECCCCCCEEEEEEEEECCC >Mature Secondary Structure MNEKIFTLPVTEQISPFISQRQLDELPVVVVSHPKVRAAISLQGAHLLAWQPSGEKPVIW CCCEEEEEECHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEECCCEEEEECCCCCCCEEE LSNNTPFKKGNAIRGGVPICWPWFGPVAKPSHGFARNQPWTLTAHDEDDNGVILTFTLKD ECCCCCCCCCCEEECCCCEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECC NEQTRSLWPHAFTLIARFKLGEECEIELESHGDYQATAALHTYFQIGDIGQVKVAGLGEP CCCHHHHCHHHEEHHHHHCCCCEEEEEECCCCCEEEEEEEEEEEEECCCCEEEEEECCCH YIDKVAGGAEARQVGDVTFVGQTDRVYTQPDAFSLIKDAAQQRTIEVHHHHMSDVIAWNP HHHHHCCCCCHHCCCCEEEECCCCCEEECCCHHHHHHHHHHHCEEEEEECCCCCEEEECC GVELSCSMADMPNDGYKTMVCVETGRVSKPLVAAGEQPARLAVTFRVRNNG CCEEEEEECCCCCCCCEEEEEEECCCCCCCCEECCCCCCEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503; 9298646; 10493123 [H]