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The map label for this gene is yciU [C]

Identifier: 157370930

GI number: 157370930

Start: 2961815

End: 2962138

Strand: Direct

Name: yciU [C]

Synonym: Spro_2690

Alternate gene names: 157370930

Gene position: 2961815-2962138 (Clockwise)

Preceding gene: 157370929

Following gene: 157370932

Centisome position: 54.36

GC content: 52.78

Gene sequence:

>324_bases
ATGGATTTGAATAACCGCCTTACTGAAGACGAAACGCTGGAACAGGCTTACGACATCTTTTTGGAATTGGCCGGCGACAA
TCTGGATCCGGCGGATATTCTGCTGTTCAACCTGCAGTTTGAGGAGCGCGGCGGCGCAGAACTGTATGACCCGGCGGAAG
ACTGGTCAGAACATGTGGACTTTGACCTGAACCCGGACTTTTTCGCCGAAGTGGTGATTGGCCTGGCGGACAGCGATGGC
GAACCGATCAATGACGTGTTTGCCCGCGTGTTACTGTGCCGTGAGAAAGACCACAAGCTTTGCCACATTCTGTGGAAAGA
GTAA

Upstream 100 bases:

>100_bases
TTACTTAAGTAAGCGCCTGAGGATGAATGAGCTGGTCGCCTAGCTGCAACTTGAAATTCATAGGGTATAATGAGGAATCA
TTTGTTATCGGGATTTAATT

Downstream 100 bases:

>100_bases
CAGCGCATACATCAATATAAACCATGCCGGTCACGTTGACCGGCATGGTTATTTACCTTTGCCGTCAGGCGACGATCACC
TGGAGATTGGCCGGGAAAAC

Product: dsDNA-mimic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MDLNNRLTEDETLEQAYDIFLELAGDNLDPADILLFNLQFEERGGAELYDPAEDWSEHVDFDLNPDFFAEVVIGLADSDG
EPINDVFARVLLCREKDHKLCHILWKE

Sequences:

>Translated_107_residues
MDLNNRLTEDETLEQAYDIFLELAGDNLDPADILLFNLQFEERGGAELYDPAEDWSEHVDFDLNPDFFAEVVIGLADSDG
EPINDVFARVLLCREKDHKLCHILWKE
>Mature_107_residues
MDLNNRLTEDETLEQAYDIFLELAGDNLDPADILLFNLQFEERGGAELYDPAEDWSEHVDFDLNPDFFAEVVIGLADSDG
EPINDVFARVLLCREKDHKLCHILWKE

Specific function: Unknown

COG id: COG3099

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0263 family

Homologues:

Organism=Escherichia coli, GI87081860, Length=107, Percent_Identity=89.7196261682243, Blast_Score=197, Evalue=9e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2690_SERP5 (A8GFA1)

Other databases:

- EMBL:   CP000826
- RefSeq:   YP_001478919.1
- ProteinModelPortal:   A8GFA1
- SMR:   A8GFA1
- STRING:   A8GFA1
- GeneID:   5606472
- GenomeReviews:   CP000826_GR
- KEGG:   spe:Spro_2690
- eggNOG:   COG3099
- HOGENOM:   HBG298413
- OMA:   DIAYDIF
- ProtClustDB:   PRK05094
- BioCyc:   SPRO399741:SPRO_2690-MONOMER
- HAMAP:   MF_00680
- InterPro:   IPR007376
- PIRSF:   PIRSF004916
- ProDom:   PD020447

Pfam domain/function: PF04269 DUF440; SSF102816 dsDNA_mimic_put

EC number: NA

Molecular weight: Translated: 12342; Mature: 12342

Theoretical pI: Translated: 3.76; Mature: 3.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLNNRLTEDETLEQAYDIFLELAGDNLDPADILLFNLQFEERGGAELYDPAEDWSEHVD
CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHCC
FDLNPDFFAEVVIGLADSDGEPINDVFARVLLCREKDHKLCHILWKE
CCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECC
>Mature Secondary Structure
MDLNNRLTEDETLEQAYDIFLELAGDNLDPADILLFNLQFEERGGAELYDPAEDWSEHVD
CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHCC
FDLNPDFFAEVVIGLADSDGEPINDVFARVLLCREKDHKLCHILWKE
CCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA