| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is yciW [H]
Identifier: 157370874
GI number: 157370874
Start: 2898415
End: 2899605
Strand: Direct
Name: yciW [H]
Synonym: Spro_2634
Alternate gene names: 157370874
Gene position: 2898415-2899605 (Clockwise)
Preceding gene: 157370873
Following gene: 157370877
Centisome position: 53.19
GC content: 59.03
Gene sequence:
>1191_bases ATGGAACTACTACGTCGACAACATAATGCCCAGTGGTATCACGAAACCCAAAGCAGCGTGCGCGGTGACCAGCCGCTGGA ACCCCAGGCGGCCGGTATCCGCGATCGCTTTCTGCTGGGGCTGGGCGCTTTTGCCGACGAAGCGCTGAACACGGCACTGA CCGCACGCGCAGGGGTATTTAACGCCTCGCTGGCCAGTTACCACGTACTGTTCCCGGATCGGGTCGAATTAACGCGAACA GTGACATTGTCACCTTACGACCGTCTCAGTACTGCGCTGACGGTGGCACAGGTGACCGGCGTGCAATCCCTCTGTAGCCA TTACGCTGCCCGCCTCGCCCCGCTGTACAGCCCTGACGCCTCCCGAGAAAGTAACATCCGCCTGGCACAAATCACCCAAT ATGCCCGTCAGCTCGCCAGTCAGCCGACCCTGATTTGCCCTAAAGCCTTACAACAGCTCAGCGACGTCGGGCTCAGCCCG GCGGATATTGTGGCGTTTTCGCAGATTATCGGCTTTGTCAGCTATCAGGCGCGGGTGGTGGCCGGCGTGGCCGCATTAGC CGGGCGGCCAACTGGCGTGGTGCCCGGTTTCCCGAACATAGCGGATGCTGAAAATGTGCCCTTCACGACGGAAGAATTGA CATGGCAAGCACGGCTGCCATCGGTGGTGCTGGAGGAAGCATGCGCTGAACAACTTGACGTGTTGGATCAAAGCCACCCC GACGCCCGCAGCGAGTCTTATTATCTGCTGCTGGCCCACGATGCCCCCGCGCTACGTGAGCGCAACGGCGTATTTAACAG CATTAATGCCGACGGCTATGGCCTGTCGGCGCGGCTGAAGGCACTGGCAACGCTGGCAGTTTCGCGCATTAACGGCAGTC GCTATTGTGCCTCCACCGTGGCGCAGGATATTGAGCATGACTTATTGGTCAGTGCTCTGTTCGAGAATATTGATCATGGG CTGGAGAGCACCGATAACCCGGTTTATCAGGCGGTGATCCGCGTGGCAGCAGACCTGACCCGCACGCCGGAAAAATTCAC TCCACGTAGCGTGCAGCCGTTGTTTAACAGTGGGATGAATCAGGCCCAGGCGCTGGACGTGATCCTCACCGGGGCACTCT ACGCCTGGGAGAACCGTTTACGCCAAACTCTGGGTGACACACAGTACTTCAACGAAAGCCAGGCGGAATAG
Upstream 100 bases:
>100_bases CCTGCCATTCCGTGCCCCTGTGTGGGCAGGTTGCCTTTTTATCTTGCCGCCGTTGCCTCTTGCAGCGGTGGCTGTTGTGC TTGATTAAGGACTATCCCCT
Downstream 100 bases:
>100_bases TTACCGCAGCAGCCAACCGCGCGCGGCATCAAAAAAGTGCTGCGCCAATGGCGATGCGCGCCCTGGCTCGGCGGTGACCA CTGCGGCGTGACGTGACATG
Product: peroxidase-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 396; Mature: 396
Protein sequence:
>396_residues MELLRRQHNAQWYHETQSSVRGDQPLEPQAAGIRDRFLLGLGAFADEALNTALTARAGVFNASLASYHVLFPDRVELTRT VTLSPYDRLSTALTVAQVTGVQSLCSHYAARLAPLYSPDASRESNIRLAQITQYARQLASQPTLICPKALQQLSDVGLSP ADIVAFSQIIGFVSYQARVVAGVAALAGRPTGVVPGFPNIADAENVPFTTEELTWQARLPSVVLEEACAEQLDVLDQSHP DARSESYYLLLAHDAPALRERNGVFNSINADGYGLSARLKALATLAVSRINGSRYCASTVAQDIEHDLLVSALFENIDHG LESTDNPVYQAVIRVAADLTRTPEKFTPRSVQPLFNSGMNQAQALDVILTGALYAWENRLRQTLGDTQYFNESQAE
Sequences:
>Translated_396_residues MELLRRQHNAQWYHETQSSVRGDQPLEPQAAGIRDRFLLGLGAFADEALNTALTARAGVFNASLASYHVLFPDRVELTRT VTLSPYDRLSTALTVAQVTGVQSLCSHYAARLAPLYSPDASRESNIRLAQITQYARQLASQPTLICPKALQQLSDVGLSP ADIVAFSQIIGFVSYQARVVAGVAALAGRPTGVVPGFPNIADAENVPFTTEELTWQARLPSVVLEEACAEQLDVLDQSHP DARSESYYLLLAHDAPALRERNGVFNSINADGYGLSARLKALATLAVSRINGSRYCASTVAQDIEHDLLVSALFENIDHG LESTDNPVYQAVIRVAADLTRTPEKFTPRSVQPLFNSGMNQAQALDVILTGALYAWENRLRQTLGDTQYFNESQAE >Mature_396_residues MELLRRQHNAQWYHETQSSVRGDQPLEPQAAGIRDRFLLGLGAFADEALNTALTARAGVFNASLASYHVLFPDRVELTRT VTLSPYDRLSTALTVAQVTGVQSLCSHYAARLAPLYSPDASRESNIRLAQITQYARQLASQPTLICPKALQQLSDVGLSP ADIVAFSQIIGFVSYQARVVAGVAALAGRPTGVVPGFPNIADAENVPFTTEELTWQARLPSVVLEEACAEQLDVLDQSHP DARSESYYLLLAHDAPALRERNGVFNSINADGYGLSARLKALATLAVSRINGSRYCASTVAQDIEHDLLVSALFENIDHG LESTDNPVYQAVIRVAADLTRTPEKFTPRSVQPLFNSGMNQAQALDVILTGALYAWENRLRQTLGDTQYFNESQAE
Specific function: Unknown
COG id: COG4950
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081868, Length=396, Percent_Identity=37.3737373737374, Blast_Score=209, Evalue=3e-55,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43214; Mature: 43214
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELLRRQHNAQWYHETQSSVRGDQPLEPQAAGIRDRFLLGLGAFADEALNTALTARAGVF CHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH NASLASYHVLFPDRVELTRTVTLSPYDRLSTALTVAQVTGVQSLCSHYAARLAPLYSPDA HHHHHHEEEECCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC SRESNIRLAQITQYARQLASQPTLICPKALQQLSDVGLSPADIVAFSQIIGFVSYQARVV CCCCCCHHHHHHHHHHHHHCCCCEECHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH AGVAALAGRPTGVVPGFPNIADAENVPFTTEELTWQARLPSVVLEEACAEQLDVLDQSHP HHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCC DARSESYYLLLAHDAPALRERNGVFNSINADGYGLSARLKALATLAVSRINGSRYCASTV CCCCCCEEEEEECCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHH AQDIEHDLLVSALFENIDHGLESTDNPVYQAVIRVAADLTRTPEKFTPRSVQPLFNSGMN HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCC QAQALDVILTGALYAWENRLRQTLGDTQYFNESQAE HHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCC >Mature Secondary Structure MELLRRQHNAQWYHETQSSVRGDQPLEPQAAGIRDRFLLGLGAFADEALNTALTARAGVF CHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH NASLASYHVLFPDRVELTRTVTLSPYDRLSTALTVAQVTGVQSLCSHYAARLAPLYSPDA HHHHHHEEEECCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC SRESNIRLAQITQYARQLASQPTLICPKALQQLSDVGLSPADIVAFSQIIGFVSYQARVV CCCCCCHHHHHHHHHHHHHCCCCEECHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH AGVAALAGRPTGVVPGFPNIADAENVPFTTEELTWQARLPSVVLEEACAEQLDVLDQSHP HHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCC DARSESYYLLLAHDAPALRERNGVFNSINADGYGLSARLKALATLAVSRINGSRYCASTV CCCCCCEEEEEECCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHH AQDIEHDLLVSALFENIDHGLESTDNPVYQAVIRVAADLTRTPEKFTPRSVQPLFNSGMN HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCC QAQALDVILTGALYAWENRLRQTLGDTQYFNESQAE HHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]