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The map label for this gene is ydeP [H]

Identifier: 157370877

GI number: 157370877

Start: 2902034

End: 2904340

Strand: Direct

Name: ydeP [H]

Synonym: Spro_2637

Alternate gene names: 157370877

Gene position: 2902034-2904340 (Clockwise)

Preceding gene: 157370874

Following gene: 157370878

Centisome position: 53.26

GC content: 59.04

Gene sequence:

>2307_bases
ATGAAATTTAAACCGTCAATAAAGCCTTATACCGGCGCGGCGGGCGGCTGGGGTTCACTCGAAGCCACCACTCGCTATGT
GCTCGACAGCAAACAGACGCTGAAAAATCTGCGTAACCTGATGCGCGTAAATAAGGCCCGCGGCTTCGACTGCCCGGGCT
GCGCCTGGGGCGATGATAATCACAGCACTTTCAGCTTCTGCGAAAACGGCGCCAAGGCGGTCAGTTGGGAAGCCACGCGT
AACGCGGTCGAACCGGAATTCTTTGCCGCTCACAGCGTCAGCACTCTGCAGCAACAAAGCGATTACTTTCTTGAGTATCA
GGGCCGCCTCACCCACCCAATGCGCTATAACGCCGAAACCGACCACTATGAGCCGATCGGTTGGCCAGACGCGCTGGCGT
TGATTGCCCGGCACATCAGGCAAATGGATAATCCGAACCAGATCGAGCTGTATACCTCGGGGCGCGCCAGTAACGAAGCC
TCCTACCTGTATCAACTGTTTGGTCGCATGCTCGGTACCAGTAACTTTCCTGACTGCTCCAACATGTGCCACGAAGCCAG
CGGCGTCGGGCTGAAACAAAGCATCGGCGTGGGTAAAGGCACCATCCGTATGGATGACTTTGAAAAGGCCGACGCCATCT
TCGTATTTGGTCAGAACCCCGGCACCAACCACCCGCGCATGCTGCACAGCCTGAAAAACGCGGCCAACCGTGGGGCGCGC
ATTGTCAGTTTTAACACCCTGCGCGAACGTGGGCTGGAGCGCTTTGCCGATCCGCAAAGCCCGATTCAAATGCTGACGCC
CAAGTCATCACCGATCAGTTCGTCCTATTTCCAACCCAACCTCGGCGGAGATATGGCCGCGGTACGCGGCATGGTGAAAG
CTTTGCTTGAAGGCCACCGTCAGCGCTTGGCTGCCGGTGAGCCAGGCCTGTTCGACCTGGCCTTTATTGAGCAGCACAGC
GTCGGCGTGGAGAGCTATCTGGCCCAGGTGGATGCCACCTCATGGGAGCAAATCACCCAGCAGTCCGGCCTCAGCGAAGC
ACAACTACGCCAGGCGGCGGCCATTTATCAGGGTGCCGAGCGCGTGATCTGCACCTGGGCAATGGGTGTGACCCAGCATA
AACACTCGGTGCCGACGGTACGTGAAATCACCAATCTGCAACTGCTGTTCGGTCAGTTAGGCAAACCGGGCGCCGGTCTG
TGCCCGGTACGCGGCCACAGCAACGTGCAGGGCAACCGTACCATGGGGATCGACGAGAAGTCGCCCAAGGCGCTGCTAGA
CAGCCTGGAACAACATTTTAACTTCTCGCCGCGACGCGAACCGGGCCATAACACCGTAGAGGCGATTGAGGCCATGCTGC
GTGGTGAAGTGAAGGTTTTGCTGGCACTGGGCGGTAATCTGGCCGCCGCCGCACCGGACACCGAACGCACAGCCCGCGCC
CTGCGCTGCTGCGACCTGACGGTGCATATCAGTACCAAACTTAACCGTAGCCATCTGGTCACCGGCAAGGACGCACTGAT
CCTGCCAACGTTGGGCCGAACCGAGCAGGACTTGCAGGCCAGCGGCCCGCAGTACATCACGGTAGAAGACTCCTTCAGCA
TGGTGCATGCGTCCGAAGGCGTCGGCAAGCCGCTGGCGGAAACCCAACGCTCGGAAACCGCCATTGTCTGCGGTATCGCT
GATGCGGTGCTGGGCAACCAACAGCTCGACTGGCTGGAGTTGGCGGATGACTATTCATTGATCCGCAACCATATCGCCGC
CACCATTCCGGGCTTCGAAGATTTTAACCATCGCTGCGATCAGCCGGGTGGTTTCTATCTGGGCAATGCCGCCGCCGAAC
TGCGCTTCAATACCCCGAGCGGCAAGGCGGAATTCGGGGCTGCCCCGTTGCCGGACAGCCTGTTCCCGCAGTTGGATGGT
CGCCAGGCACCCTTCACACTGCAGACCCTGCGTTCGCACGATCAGTACAACACCACTATCTACGGGCTGGATGACCGCTA
TCGTGGCGTGTATGGTCAACGAGAAGTGCTGTTTATTAACCCGGAAGATCTGGCCGTTCTGGATATGCAGGATGGCGAAT
TAGTGGAGATCGAAACCCTGTGGAATGACGGTATCACCCGCAAGGTAAGCGGTTTCAAACTGGTGAGCTACGATATCCCG
CGCGGTAATCTGGCGGCTTATTATCCCGAGACCAACCCACTGGTGCCGCTGGCCAGCTTTGGTGACGGCACCGGCACGCC
GACCTCCAAGTCGATACCGGTGGAAATACGCCGTTGCGCCGCGCAGCCGACGCTGCGTATCGCCTGA

Upstream 100 bases:

>100_bases
TTAGACGCTGAAGCCGCACCCTCCTAAACTTGTGACATAAACACTGAAAGCGCTTAAAAAAGCGTTCACTTTTTAGCTAC
AACCACCTGCGAAGACCAAA

Downstream 100 bases:

>100_bases
CCTGCAGCGCCCGGTTTACGCCGGGCGCGCTAATATCTCGATCGCCAACGGGCCCGCTTTTCTCTCCGGCGACTTTTGAT
GACTGGATATTCCCTATAAT

Product: oxidoreductase alpha (molybdopterin) subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 768; Mature: 768

Protein sequence:

>768_residues
MKFKPSIKPYTGAAGGWGSLEATTRYVLDSKQTLKNLRNLMRVNKARGFDCPGCAWGDDNHSTFSFCENGAKAVSWEATR
NAVEPEFFAAHSVSTLQQQSDYFLEYQGRLTHPMRYNAETDHYEPIGWPDALALIARHIRQMDNPNQIELYTSGRASNEA
SYLYQLFGRMLGTSNFPDCSNMCHEASGVGLKQSIGVGKGTIRMDDFEKADAIFVFGQNPGTNHPRMLHSLKNAANRGAR
IVSFNTLRERGLERFADPQSPIQMLTPKSSPISSSYFQPNLGGDMAAVRGMVKALLEGHRQRLAAGEPGLFDLAFIEQHS
VGVESYLAQVDATSWEQITQQSGLSEAQLRQAAAIYQGAERVICTWAMGVTQHKHSVPTVREITNLQLLFGQLGKPGAGL
CPVRGHSNVQGNRTMGIDEKSPKALLDSLEQHFNFSPRREPGHNTVEAIEAMLRGEVKVLLALGGNLAAAAPDTERTARA
LRCCDLTVHISTKLNRSHLVTGKDALILPTLGRTEQDLQASGPQYITVEDSFSMVHASEGVGKPLAETQRSETAIVCGIA
DAVLGNQQLDWLELADDYSLIRNHIAATIPGFEDFNHRCDQPGGFYLGNAAAELRFNTPSGKAEFGAAPLPDSLFPQLDG
RQAPFTLQTLRSHDQYNTTIYGLDDRYRGVYGQREVLFINPEDLAVLDMQDGELVEIETLWNDGITRKVSGFKLVSYDIP
RGNLAAYYPETNPLVPLASFGDGTGTPTSKSIPVEIRRCAAQPTLRIA

Sequences:

>Translated_768_residues
MKFKPSIKPYTGAAGGWGSLEATTRYVLDSKQTLKNLRNLMRVNKARGFDCPGCAWGDDNHSTFSFCENGAKAVSWEATR
NAVEPEFFAAHSVSTLQQQSDYFLEYQGRLTHPMRYNAETDHYEPIGWPDALALIARHIRQMDNPNQIELYTSGRASNEA
SYLYQLFGRMLGTSNFPDCSNMCHEASGVGLKQSIGVGKGTIRMDDFEKADAIFVFGQNPGTNHPRMLHSLKNAANRGAR
IVSFNTLRERGLERFADPQSPIQMLTPKSSPISSSYFQPNLGGDMAAVRGMVKALLEGHRQRLAAGEPGLFDLAFIEQHS
VGVESYLAQVDATSWEQITQQSGLSEAQLRQAAAIYQGAERVICTWAMGVTQHKHSVPTVREITNLQLLFGQLGKPGAGL
CPVRGHSNVQGNRTMGIDEKSPKALLDSLEQHFNFSPRREPGHNTVEAIEAMLRGEVKVLLALGGNLAAAAPDTERTARA
LRCCDLTVHISTKLNRSHLVTGKDALILPTLGRTEQDLQASGPQYITVEDSFSMVHASEGVGKPLAETQRSETAIVCGIA
DAVLGNQQLDWLELADDYSLIRNHIAATIPGFEDFNHRCDQPGGFYLGNAAAELRFNTPSGKAEFGAAPLPDSLFPQLDG
RQAPFTLQTLRSHDQYNTTIYGLDDRYRGVYGQREVLFINPEDLAVLDMQDGELVEIETLWNDGITRKVSGFKLVSYDIP
RGNLAAYYPETNPLVPLASFGDGTGTPTSKSIPVEIRRCAAQPTLRIA
>Mature_768_residues
MKFKPSIKPYTGAAGGWGSLEATTRYVLDSKQTLKNLRNLMRVNKARGFDCPGCAWGDDNHSTFSFCENGAKAVSWEATR
NAVEPEFFAAHSVSTLQQQSDYFLEYQGRLTHPMRYNAETDHYEPIGWPDALALIARHIRQMDNPNQIELYTSGRASNEA
SYLYQLFGRMLGTSNFPDCSNMCHEASGVGLKQSIGVGKGTIRMDDFEKADAIFVFGQNPGTNHPRMLHSLKNAANRGAR
IVSFNTLRERGLERFADPQSPIQMLTPKSSPISSSYFQPNLGGDMAAVRGMVKALLEGHRQRLAAGEPGLFDLAFIEQHS
VGVESYLAQVDATSWEQITQQSGLSEAQLRQAAAIYQGAERVICTWAMGVTQHKHSVPTVREITNLQLLFGQLGKPGAGL
CPVRGHSNVQGNRTMGIDEKSPKALLDSLEQHFNFSPRREPGHNTVEAIEAMLRGEVKVLLALGGNLAAAAPDTERTARA
LRCCDLTVHISTKLNRSHLVTGKDALILPTLGRTEQDLQASGPQYITVEDSFSMVHASEGVGKPLAETQRSETAIVCGIA
DAVLGNQQLDWLELADDYSLIRNHIAATIPGFEDFNHRCDQPGGFYLGNAAAELRFNTPSGKAEFGAAPLPDSLFPQLDG
RQAPFTLQTLRSHDQYNTTIYGLDDRYRGVYGQREVLFINPEDLAVLDMQDGELVEIETLWNDGITRKVSGFKLVSYDIP
RGNLAAYYPETNPLVPLASFGDGTGTPTSKSIPVEIRRCAAQPTLRIA

Specific function: Probably involved in acid resistance [H]

COG id: COG0243

COG function: function code C; Anaerobic dehydrogenases, typically selenocysteine-containing

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic molybdopterin-containing oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787778, Length=761, Percent_Identity=46.9119579500657, Blast_Score=728, Evalue=0.0,
Organism=Escherichia coli, GI3868721, Length=313, Percent_Identity=32.2683706070287, Blast_Score=161, Evalue=2e-40,
Organism=Escherichia coli, GI1788534, Length=404, Percent_Identity=23.2673267326733, Blast_Score=89, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009010
- InterPro:   IPR006657
- InterPro:   IPR006656
- InterPro:   IPR010046 [H]

Pfam domain/function: PF00384 Molybdopterin; PF01568 Molydop_binding [H]

EC number: NA

Molecular weight: Translated: 84323; Mature: 84323

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFKPSIKPYTGAAGGWGSLEATTRYVLDSKQTLKNLRNLMRVNKARGFDCPGCAWGDDN
CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
HSTFSFCENGAKAVSWEATRNAVEPEFFAAHSVSTLQQQSDYFLEYQGRLTHPMRYNAET
CCHHHHHHCCCCEEEEHHHHCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCEECCCCC
DHYEPIGWPDALALIARHIRQMDNPNQIELYTSGRASNEASYLYQLFGRMLGTSNFPDCS
CCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCHH
NMCHEASGVGLKQSIGVGKGTIRMDDFEKADAIFVFGQNPGTNHPRMLHSLKNAANRGAR
HHHHHHCCCCCHHHCCCCCCEEEECCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCE
IVSFNTLRERGLERFADPQSPIQMLTPKSSPISSSYFQPNLGGDMAAVRGMVKALLEGHR
EEEEHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
QRLAAGEPGLFDLAFIEQHSVGVESYLAQVDATSWEQITQQSGLSEAQLRQAAAIYQGAE
HHHHCCCCCCEEEEEHHHHCCCHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHCCC
RVICTWAMGVTQHKHSVPTVREITNLQLLFGQLGKPGAGLCPVRGHSNVQGNRTMGIDEK
EEEEEEHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEECCCCC
SPKALLDSLEQHFNFSPRREPGHNTVEAIEAMLRGEVKVLLALGGNLAAAAPDTERTARA
CHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCEEECCCCHHHHHHH
LRCCDLTVHISTKLNRSHLVTGKDALILPTLGRTEQDLQASGPQYITVEDSFSMVHASEG
HHHEEEEEEEEECCCCCEEECCCCEEEECCCCCCHHHHHCCCCCEEEEECCCCEEECCCC
VGKPLAETQRSETAIVCGIADAVLGNQQLDWLELADDYSLIRNHIAATIPGFEDFNHRCD
CCCCHHHHCCCCEEEEEEHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCC
QPGGFYLGNAAAELRFNTPSGKAEFGAAPLPDSLFPQLDGRQAPFTLQTLRSHDQYNTTI
CCCCEEECCCEEEEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHCCCCCCCEE
YGLDDRYRGVYGQREVLFINPEDLAVLDMQDGELVEIETLWNDGITRKVSGFKLVSYDIP
EECCHHHCCCCCCCEEEEECCCCEEEEECCCCCEEEEEEECCCCCEEECCCEEEEEEECC
RGNLAAYYPETNPLVPLASFGDGTGTPTSKSIPVEIRRCAAQPTLRIA
CCCEEEECCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHCCCCCEECC
>Mature Secondary Structure
MKFKPSIKPYTGAAGGWGSLEATTRYVLDSKQTLKNLRNLMRVNKARGFDCPGCAWGDDN
CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
HSTFSFCENGAKAVSWEATRNAVEPEFFAAHSVSTLQQQSDYFLEYQGRLTHPMRYNAET
CCHHHHHHCCCCEEEEHHHHCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCEECCCCC
DHYEPIGWPDALALIARHIRQMDNPNQIELYTSGRASNEASYLYQLFGRMLGTSNFPDCS
CCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCHH
NMCHEASGVGLKQSIGVGKGTIRMDDFEKADAIFVFGQNPGTNHPRMLHSLKNAANRGAR
HHHHHHCCCCCHHHCCCCCCEEEECCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCE
IVSFNTLRERGLERFADPQSPIQMLTPKSSPISSSYFQPNLGGDMAAVRGMVKALLEGHR
EEEEHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
QRLAAGEPGLFDLAFIEQHSVGVESYLAQVDATSWEQITQQSGLSEAQLRQAAAIYQGAE
HHHHCCCCCCEEEEEHHHHCCCHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHCCC
RVICTWAMGVTQHKHSVPTVREITNLQLLFGQLGKPGAGLCPVRGHSNVQGNRTMGIDEK
EEEEEEHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEECCCCC
SPKALLDSLEQHFNFSPRREPGHNTVEAIEAMLRGEVKVLLALGGNLAAAAPDTERTARA
CHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCEEECCCCHHHHHHH
LRCCDLTVHISTKLNRSHLVTGKDALILPTLGRTEQDLQASGPQYITVEDSFSMVHASEG
HHHEEEEEEEEECCCCCEEECCCCEEEECCCCCCHHHHHCCCCCEEEEECCCCEEECCCC
VGKPLAETQRSETAIVCGIADAVLGNQQLDWLELADDYSLIRNHIAATIPGFEDFNHRCD
CCCCHHHHCCCCEEEEEEHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCC
QPGGFYLGNAAAELRFNTPSGKAEFGAAPLPDSLFPQLDGRQAPFTLQTLRSHDQYNTTI
CCCCEEECCCEEEEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHCCCCCCCEE
YGLDDRYRGVYGQREVLFINPEDLAVLDMQDGELVEIETLWNDGITRKVSGFKLVSYDIP
EECCHHHCCCCCCCEEEEECCCCEEEEECCCCCEEEEEEECCCCCEEECCCEEEEEEECC
RGNLAAYYPETNPLVPLASFGDGTGTPTSKSIPVEIRRCAAQPTLRIA
CCCEEEECCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]