| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157370748
Identifier: 157370748
GI number: 157370748
Start: 2754702
End: 2754956
Strand: Direct
Name: 157370748
Synonym: Spro_2508
Alternate gene names: NA
Gene position: 2754702-2754956 (Clockwise)
Preceding gene: 157370743
Following gene: 157370749
Centisome position: 50.56
GC content: 49.41
Gene sequence:
>255_bases ATGAGCAAGAAAGTGAATGGCGTTGTTTGCTGTCTGTTATTTCTGATTTCTTCCCTGTGTTTTGGCGCTGAACCGCGCCA ACTCGCCACCGAACAAGAAAAAGCCCGCATACATAGCCACATTCAGGATGTGTTCAATGAATTTAACGTCCAGATTATGT CGCCTAACTTCGTGCTTCAGCCCGAAAATGCGGTGATGGTCAGTCAGGATCACTGGTACACCGCGCCGGCCGTGCAACCG GATAAACCCTCATGA
Upstream 100 bases:
>100_bases CCGAGCTTGATTGAGCGACTTGAAAGCACAAGCGTCTGGGCTAAGCTGAAATTGAAGAGCACAAAATAATAAAAATAAAT TACTGACTGGGCAGGTAACC
Downstream 100 bases:
>100_bases CAAAATTGAGTGCCCTGCTGGTTCCTTGCCTGACGTGGAGAATCAAATAATGACAATACCGTGGCATTGCCAAAATAGCG GCAATCATCTCCCGCTCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: Mechanosensitive Ion Channel MscS; Mechano-Sensitive Channel
Number of amino acids: Translated: 84; Mature: 83
Protein sequence:
>84_residues MSKKVNGVVCCLLFLISSLCFGAEPRQLATEQEKARIHSHIQDVFNEFNVQIMSPNFVLQPENAVMVSQDHWYTAPAVQP DKPS
Sequences:
>Translated_84_residues MSKKVNGVVCCLLFLISSLCFGAEPRQLATEQEKARIHSHIQDVFNEFNVQIMSPNFVLQPENAVMVSQDHWYTAPAVQP DKPS >Mature_83_residues SKKVNGVVCCLLFLISSLCFGAEPRQLATEQEKARIHSHIQDVFNEFNVQIMSPNFVLQPENAVMVSQDHWYTAPAVQPD KPS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9460; Mature: 9329
Theoretical pI: Translated: 6.22; Mature: 6.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKVNGVVCCLLFLISSLCFGAEPRQLATEQEKARIHSHIQDVFNEFNVQIMSPNFVLQ CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCEEEC PENAVMVSQDHWYTAPAVQPDKPS CCCEEEEECCCEEECCCCCCCCCC >Mature Secondary Structure SKKVNGVVCCLLFLISSLCFGAEPRQLATEQEKARIHSHIQDVFNEFNVQIMSPNFVLQ CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCEEEC PENAVMVSQDHWYTAPAVQPDKPS CCCEEEEECCCEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA