| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
Click here to switch to the map view.
The map label for this gene is yxxF [H]
Identifier: 157370728
GI number: 157370728
Start: 2730124
End: 2731038
Strand: Direct
Name: yxxF [H]
Synonym: Spro_2488
Alternate gene names: 157370728
Gene position: 2730124-2731038 (Clockwise)
Preceding gene: 157370726
Following gene: 157370737
Centisome position: 50.1
GC content: 58.36
Gene sequence:
>915_bases ATGAAGGTGAAAACCAGCGGCGTATGGCAGATGACGCTCGCCATGATAATTTCCGGCACCGTAGGCTGGCCGGTGGTGAT GCTGGGGCAACCGGCTACCACGGTGGTCTTCTGGCGTTGTGCCTTTGGCGCGCTGGCGATGCTGGTTGCCTGCGCCCTGC TCGGCCTGCTGAAAAAGGGCCGGTTAACCCGGCGACAGGCCGCAATAGCGGTACTGGGTGGGATCGCGCTGGTGTTGAAC TGGACGCTGTTATTTGCTGCCTATTCCTACGCCTCTATTGCCGTGGCAACGGTCACTTACCACGTGCAACCCTTTATGTT GGTCGGGCTGGGGCTGTTGTTTTTTGGTGAAAAACTGACCGCAAACAAAATCGGCTGGCTGCTGCTGGCCTTTGGCGGCA TGTTGCTGATTATTACCGGAAAACATGAAGGCGCTGCTTCCGGATCCCATTACTTTACCGGTGTGATGCTGGCGCTGGGT GCGGCTTTTATGTATGCGGTCGCGGCAGCGATTGTCAAACAGTTGAAAGGGGTGCCACCGCATCTGATCGTGTTGATTCA GCTCACCGTTGGCGTGGTGCTGTTGGCTCCCTTCGCCGGGCTGGACGCTCTGCCATCAACGGCAAATACCTGGCTGCTGC TGGCAACCCTTGGCCTGGTGCATACCGGGTTGATGTCTTCGCTGTTGTACAGCGCGATCCAGAAAATCCCGACCAGCCTG GTGGGTGCCTTGTCGTTTATCTATCCGTTGGTGGCGATTATCGTCGACTGGGCGGTGTTCGGCCACCGCCTGAGCCTGAT GCAACTGTTGGGCGCTGCGGCCATCTTGCTGGCGGCGGCGGGGATGAACTTTGGTTGGCGACTGATGCGGGCGAAGAAAA AACCCTGTCTGGCGGACGAGCGCCAAACGCCTTAA
Upstream 100 bases:
>100_bases TGACGAACGACTGCAGGCTGTTCATCATAATGTTCAGTTGTTCATTTTAATGGTAACTGCCGATGTCGGCAAGCACTGAG CGCAAACGGGGAGAAGGTGA
Downstream 100 bases:
>100_bases AACCCGTTTTTATCACCGATACACATCAGGCAGGGTTATCCCAAAAATATCAAAAGCTCAGCAAAATAAGGTATTCGCCC CGTTGAGAAATAGCTGTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 304; Mature: 304
Protein sequence:
>304_residues MKVKTSGVWQMTLAMIISGTVGWPVVMLGQPATTVVFWRCAFGALAMLVACALLGLLKKGRLTRRQAAIAVLGGIALVLN WTLLFAAYSYASIAVATVTYHVQPFMLVGLGLLFFGEKLTANKIGWLLLAFGGMLLIITGKHEGAASGSHYFTGVMLALG AAFMYAVAAAIVKQLKGVPPHLIVLIQLTVGVVLLAPFAGLDALPSTANTWLLLATLGLVHTGLMSSLLYSAIQKIPTSL VGALSFIYPLVAIIVDWAVFGHRLSLMQLLGAAAILLAAAGMNFGWRLMRAKKKPCLADERQTP
Sequences:
>Translated_304_residues MKVKTSGVWQMTLAMIISGTVGWPVVMLGQPATTVVFWRCAFGALAMLVACALLGLLKKGRLTRRQAAIAVLGGIALVLN WTLLFAAYSYASIAVATVTYHVQPFMLVGLGLLFFGEKLTANKIGWLLLAFGGMLLIITGKHEGAASGSHYFTGVMLALG AAFMYAVAAAIVKQLKGVPPHLIVLIQLTVGVVLLAPFAGLDALPSTANTWLLLATLGLVHTGLMSSLLYSAIQKIPTSL VGALSFIYPLVAIIVDWAVFGHRLSLMQLLGAAAILLAAAGMNFGWRLMRAKKKPCLADERQTP >Mature_304_residues MKVKTSGVWQMTLAMIISGTVGWPVVMLGQPATTVVFWRCAFGALAMLVACALLGLLKKGRLTRRQAAIAVLGGIALVLN WTLLFAAYSYASIAVATVTYHVQPFMLVGLGLLFFGEKLTANKIGWLLLAFGGMLLIITGKHEGAASGSHYFTGVMLALG AAFMYAVAAAIVKQLKGVPPHLIVLIQLTVGVVLLAPFAGLDALPSTANTWLLLATLGLVHTGLMSSLLYSAIQKIPTSL VGALSFIYPLVAIIVDWAVFGHRLSLMQLLGAAAILLAAAGMNFGWRLMRAKKKPCLADERQTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 32218; Mature: 32218
Theoretical pI: Translated: 10.66; Mature: 10.66
Prosite motif: PS00845 CAP_GLY_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVKTSGVWQMTLAMIISGTVGWPVVMLGQPATTVVFWRCAFGALAMLVACALLGLLKKG CCCCCCHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC RLTRRQAAIAVLGGIALVLNWTLLFAAYSYASIAVATVTYHVQPFMLVGLGLLFFGEKLT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH ANKIGWLLLAFGGMLLIITGKHEGAASGSHYFTGVMLALGAAFMYAVAAAIVKQLKGVPP HHHHHHHHHHHCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH HLIVLIQLTVGVVLLAPFAGLDALPSTANTWLLLATLGLVHTGLMSSLLYSAIQKIPTSL HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGALSFIYPLVAIIVDWAVFGHRLSLMQLLGAAAILLAAAGMNFGWRLMRAKKKPCLADE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCC RQTP CCCC >Mature Secondary Structure MKVKTSGVWQMTLAMIISGTVGWPVVMLGQPATTVVFWRCAFGALAMLVACALLGLLKKG CCCCCCHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC RLTRRQAAIAVLGGIALVLNWTLLFAAYSYASIAVATVTYHVQPFMLVGLGLLFFGEKLT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH ANKIGWLLLAFGGMLLIITGKHEGAASGSHYFTGVMLALGAAFMYAVAAAIVKQLKGVPP HHHHHHHHHHHCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH HLIVLIQLTVGVVLLAPFAGLDALPSTANTWLLLATLGLVHTGLMSSLLYSAIQKIPTSL HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGALSFIYPLVAIIVDWAVFGHRLSLMQLLGAAAILLAAAGMNFGWRLMRAKKKPCLADE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCC RQTP CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7704263; 9384377; 8316082 [H]