| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is yurR [H]
Identifier: 157370689
GI number: 157370689
Start: 2681446
End: 2682501
Strand: Direct
Name: yurR [H]
Synonym: Spro_2449
Alternate gene names: 157370689
Gene position: 2681446-2682501 (Clockwise)
Preceding gene: 157370687
Following gene: 157370691
Centisome position: 49.21
GC content: 52.37
Gene sequence:
>1056_bases ATGTGTACCACAGAGAAACATATGATTGTTATCGGCGCGGGAATTATGGGGGCATCAATAGCCTATCATTTGGCAAGCCG CGGGATAAAAGTGACGGTCATTGATAAAGACCAACCTTCTTCTGGCGCTACCGGCAGCTCTTTTGGCTGGATCCACACGA CAGTAAGTGATGATGCACCTGATGCTTATCTTCGCCGCGCCTCGGTGGCCGATTGGCAGCGACTGGAAAAAGAAATCCCG GAGCTTTGGGTGAATTGGACTGGTGCACTAAGTTATGACGATGAATCGCTGGAAAGTCAGCCCAATGAAAACCTGCTTCA ACAACCCGAGATATCCAGGCTTGAACCCGCGTTTAACAACCCGCCACGGCGTGCATATTATGCGGTTTATGATGGTGCTG TCGACCCCATCGATGCCACGCACGCCCTGCTGGAAAAGGCTTGTAGCTTGGGCGCTACGCTGAAAATTCAAACGCCGGTC ATCGGTTTTCTCCAAAATGGCAACCATGTTACCGGCATCCAAACCCCGGAGGGCGTATTAAATGCGGATGCGGTTATCCT GGCCTGCGGAACAGGTATAACTCCCCTACTTGCTACCATTGGGATCCCGTTGCCGATCCTGGCGTCACCGGCAATTCTGT TACGGTTCGGCACCGAAAAACATTTAATTAACACCCTGATTTCTGGTCATGATGTAGAAGCCCGGCATGCCCGTAACGGT GATATTTTGGCTGCGGAAGACTATCCGCTATCGGGCAATACCGATAATGTCGCCGCTGAGACCCTGGCAGCGATGAAATC AGGATTGAACGGCGCAGCTTCGCTGCACTTACTGAGCCAATCGGTGGGACAGCGCCCAGTGCCGGAAGATGGATGTCCGG TCATCGGATTTGTCGGTGAGAGGCCTGGAGTTTATGTTGCCGTCATGCATCCGGCGGTAACCTGTGCGGCTACCCTGGGC AGAATGGTCAGTGAAGAGCTGATCAGCGGTAATAACCCGGAAATACCTGCAATTTATCGTCCTCGCCGCATCACTTCTGA CCCAAAACAATCTTAA
Upstream 100 bases:
>100_bases TCATGGGAAAAGCTCCCTTTGCTATCAAGTCCAAAATACCTCTGCACGATTGGGCTATTCTATGGGATAGTCAGCCCGGT TTGTATACAGGGAACTCAGG
Downstream 100 bases:
>100_bases TAACGGCAATCGTCGCAGGACTTCACCTGGCGACGATTACCGATGAAGATACTCAAATAATGTATGAAAGCAGGAAGGTC ATGCCCAGCGCCAATACCGA
Product: FAD dependent oxidoreductase
Products: Dihydroxyacetone phosphate; Ubiquinol-8 [C]
Alternate protein names: NA
Number of amino acids: Translated: 351; Mature: 351
Protein sequence:
>351_residues MCTTEKHMIVIGAGIMGASIAYHLASRGIKVTVIDKDQPSSGATGSSFGWIHTTVSDDAPDAYLRRASVADWQRLEKEIP ELWVNWTGALSYDDESLESQPNENLLQQPEISRLEPAFNNPPRRAYYAVYDGAVDPIDATHALLEKACSLGATLKIQTPV IGFLQNGNHVTGIQTPEGVLNADAVILACGTGITPLLATIGIPLPILASPAILLRFGTEKHLINTLISGHDVEARHARNG DILAAEDYPLSGNTDNVAAETLAAMKSGLNGAASLHLLSQSVGQRPVPEDGCPVIGFVGERPGVYVAVMHPAVTCAATLG RMVSEELISGNNPEIPAIYRPRRITSDPKQS
Sequences:
>Translated_351_residues MCTTEKHMIVIGAGIMGASIAYHLASRGIKVTVIDKDQPSSGATGSSFGWIHTTVSDDAPDAYLRRASVADWQRLEKEIP ELWVNWTGALSYDDESLESQPNENLLQQPEISRLEPAFNNPPRRAYYAVYDGAVDPIDATHALLEKACSLGATLKIQTPV IGFLQNGNHVTGIQTPEGVLNADAVILACGTGITPLLATIGIPLPILASPAILLRFGTEKHLINTLISGHDVEARHARNG DILAAEDYPLSGNTDNVAAETLAAMKSGLNGAASLHLLSQSVGQRPVPEDGCPVIGFVGERPGVYVAVMHPAVTCAATLG RMVSEELISGNNPEIPAIYRPRRITSDPKQS >Mature_351_residues MCTTEKHMIVIGAGIMGASIAYHLASRGIKVTVIDKDQPSSGATGSSFGWIHTTVSDDAPDAYLRRASVADWQRLEKEIP ELWVNWTGALSYDDESLESQPNENLLQQPEISRLEPAFNNPPRRAYYAVYDGAVDPIDATHALLEKACSLGATLKIQTPV IGFLQNGNHVTGIQTPEGVLNADAVILACGTGITPLLATIGIPLPILASPAILLRFGTEKHLINTLISGHDVEARHARNG DILAAEDYPLSGNTDNVAAETLAAMKSGLNGAASLHLLSQSVGQRPVPEDGCPVIGFVGERPGVYVAVMHPAVTCAATLG RMVSEELISGNNPEIPAIYRPRRITSDPKQS
Specific function: Conversion Of Glycerol 3-Phosphate To Dihydroxyacetone. Uses Fumarate Or Nitrate As Electron Acceptor. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Loosely Bound To The Cytoplasm Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DadA oxidoreductase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006076 [H]
Pfam domain/function: PF01266 DAO [H]
EC number: 1.1.99.5 [C]
Molecular weight: Translated: 37365; Mature: 37365
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCTTEKHMIVIGAGIMGASIAYHLASRGIKVTVIDKDQPSSGATGSSFGWIHTTVSDDAP CCCCCCEEEEEECCHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCCC DAYLRRASVADWQRLEKEIPELWVNWTGALSYDDESLESQPNENLLQQPEISRLEPAFNN HHHHHHHHHHHHHHHHHHHHHHEECCCEEECCCCHHHHCCCCCCHHCCCCHHHCCCCCCC PPRRAYYAVYDGAVDPIDATHALLEKACSLGATLKIQTPVIGFLQNGNHVTGIQTPEGVL CCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEECCCEEEEEECCCEEECCCCCCCCC NADAVILACGTGITPLLATIGIPLPILASPAILLRFGTEKHLINTLISGHDVEARHARNG CCCEEEEEECCCHHHHHHHHCCCHHHHCCCEEEEEECCHHHHHHHHHCCCCCCHHHCCCC DILAAEDYPLSGNTDNVAAETLAAMKSGLNGAASLHLLSQSVGQRPVPEDGCPVIGFVGE CEEEECCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEECC RPGVYVAVMHPAVTCAATLGRMVSEELISGNNPEIPAIYRPRRITSDPKQS CCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCC >Mature Secondary Structure MCTTEKHMIVIGAGIMGASIAYHLASRGIKVTVIDKDQPSSGATGSSFGWIHTTVSDDAP CCCCCCEEEEEECCHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCCC DAYLRRASVADWQRLEKEIPELWVNWTGALSYDDESLESQPNENLLQQPEISRLEPAFNN HHHHHHHHHHHHHHHHHHHHHHEECCCEEECCCCHHHHCCCCCCHHCCCCHHHCCCCCCC PPRRAYYAVYDGAVDPIDATHALLEKACSLGATLKIQTPVIGFLQNGNHVTGIQTPEGVL CCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEECCCEEEEEECCCEEECCCCCCCCC NADAVILACGTGITPLLATIGIPLPILASPAILLRFGTEKHLINTLISGHDVEARHARNG CCCEEEEEECCCHHHHHHHHCCCHHHHCCCEEEEEECCHHHHHHHHHCCCCCCHHHCCCC DILAAEDYPLSGNTDNVAAETLAAMKSGLNGAASLHLLSQSVGQRPVPEDGCPVIGFVGE CEEEECCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEECC RPGVYVAVMHPAVTCAATLGRMVSEELISGNNPEIPAIYRPRRITSDPKQS CCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Glycerol 3-phosphate; Ubiquinone-8 [C]
Specific reaction: Glycerol 3-phosphate + Ubiquinone-8 --> Dihydroxyacetone phosphate + Ubiquinol-8 [C]
General reaction: Redox reaction [C]
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]