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The map label for this gene is tnpR [H]

Identifier: 157369786

GI number: 157369786

Start: 1680967

End: 1681608

Strand: Reverse

Name: tnpR [H]

Synonym: Spro_1543

Alternate gene names: 157369786

Gene position: 1681608-1680967 (Counterclockwise)

Preceding gene: 157369787

Following gene: 157369784

Centisome position: 30.86

GC content: 45.17

Gene sequence:

>642_bases
ATGACCATTTTTGCCTATACCCGTGTATCAAAAGCCGAGAATGAAACCGGTACGACCGATAACCAAATCACCCTGATAGA
GTCACAGCACAGAATTGACAGTATTTTTTCAGATGTGAATATTTCAGGTTCGATGCCTTTTCAAAAACGACCTGAGGCAC
AGAAGCTTATCGAGAAACTCAGCGCTGGTGATACCATCGTTATTGCCAAGTTGGATCGTGGTTTTCGCGATACTGCCGAT
TGTTTGAACACCGTGAAATGGCTCCAGCAAAAGAAAATTACTCTCAAGATCCTTGATATCGCACTTGATGTGTCAACACC
GATCGGCGAGATGATTCTAACCATCATGGCTTCTGTCGCCACATTTGAGCGTAAACGTATCGCAGAACGCATCAAAGACG
GATTTAGCAATGGCCGCCTTAATGGTAAAGCTTACGGCTATAAGATTGAGGCAGTACGCCAAGGTATAGCGAAAAAAGCG
TCAGCAAGGCATCAGGCAGCCGTAGAACGCTACCTTATGATTACCAATCACCTTAAGGGTAAAATCGCTCAGGGAGCGAC
TGAGGCTCAAATGCTCGCTCATCTAACCAAAATAGGCTTGCCAATCTCACGGACAACATTGCGTAAAGCCTTAAATCGCT
GA

Upstream 100 bases:

>100_bases
TATTGGCTGGATTTCGCGAAGCAACGGAGAATAATTAGAATTATCATAACGTAATGTACTCCTCCTGTAGGCTGGATATA
ATTATTCGCAGGAGGAGAAC

Downstream 100 bases:

>100_bases
AGCGATCCCTATGCTGCGCATACATAACCTTATGATATACACCAACAAATCACTTAAACCTTGTAAATTTTAACTTTTTT
CCGCACTTTCAAAGGAATCT

Product: resolvase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 212

Protein sequence:

>213_residues
MTIFAYTRVSKAENETGTTDNQITLIESQHRIDSIFSDVNISGSMPFQKRPEAQKLIEKLSAGDTIVIAKLDRGFRDTAD
CLNTVKWLQQKKITLKILDIALDVSTPIGEMILTIMASVATFERKRIAERIKDGFSNGRLNGKAYGYKIEAVRQGIAKKA
SARHQAAVERYLMITNHLKGKIAQGATEAQMLAHLTKIGLPISRTTLRKALNR

Sequences:

>Translated_213_residues
MTIFAYTRVSKAENETGTTDNQITLIESQHRIDSIFSDVNISGSMPFQKRPEAQKLIEKLSAGDTIVIAKLDRGFRDTAD
CLNTVKWLQQKKITLKILDIALDVSTPIGEMILTIMASVATFERKRIAERIKDGFSNGRLNGKAYGYKIEAVRQGIAKKA
SARHQAAVERYLMITNHLKGKIAQGATEAQMLAHLTKIGLPISRTTLRKALNR
>Mature_212_residues
TIFAYTRVSKAENETGTTDNQITLIESQHRIDSIFSDVNISGSMPFQKRPEAQKLIEKLSAGDTIVIAKLDRGFRDTADC
LNTVKWLQQKKITLKILDIALDVSTPIGEMILTIMASVATFERKRIAERIKDGFSNGRLNGKAYGYKIEAVRQGIAKKAS
ARHQAAVERYLMITNHLKGKIAQGATEAQMLAHLTKIGLPISRTTLRKALNR

Specific function: Resolvase catalyzes the resolution (a site-specific recombination) of the cointegrated replicon to yield the final transposition products [H]

COG id: COG1961

COG function: function code L; Site-specific recombinases, DNA invertase Pin homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the site-specific recombinase resolvase family [H]

Homologues:

Organism=Escherichia coli, GI1787827, Length=148, Percent_Identity=33.7837837837838, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1787638, Length=177, Percent_Identity=31.0734463276836, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1787404, Length=146, Percent_Identity=33.5616438356164, Blast_Score=76, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR006118
- InterPro:   IPR006119
- InterPro:   IPR006120 [H]

Pfam domain/function: PF02796 HTH_7; PF00239 Resolvase [H]

EC number: NA

Molecular weight: Translated: 23714; Mature: 23583

Theoretical pI: Translated: 10.64; Mature: 10.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIFAYTRVSKAENETGTTDNQITLIESQHRIDSIFSDVNISGSMPFQKRPEAQKLIEKL
CEEEEEEHHHHCCCCCCCCCCEEEEEECHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH
SAGDTIVIAKLDRGFRDTADCLNTVKWLQQKKITLKILDIALDVSTPIGEMILTIMASVA
CCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCHHEEEEEEHHCCCCCHHHHHHHHHHHHH
TFERKRIAERIKDGFSNGRLNGKAYGYKIEAVRQGIAKKASARHQAAVERYLMITNHLKG
HHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KIAQGATEAQMLAHLTKIGLPISRTTLRKALNR
HHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHCC
>Mature Secondary Structure 
TIFAYTRVSKAENETGTTDNQITLIESQHRIDSIFSDVNISGSMPFQKRPEAQKLIEKL
EEEEEEHHHHCCCCCCCCCCEEEEEECHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH
SAGDTIVIAKLDRGFRDTADCLNTVKWLQQKKITLKILDIALDVSTPIGEMILTIMASVA
CCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCHHEEEEEEHHCCCCCHHHHHHHHHHHHH
TFERKRIAERIKDGFSNGRLNGKAYGYKIEAVRQGIAKKASARHQAAVERYLMITNHLKG
HHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KIAQGATEAQMLAHLTKIGLPISRTTLRKALNR
HHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 391406 [H]