| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157369695
Identifier: 157369695
GI number: 157369695
Start: 1584643
End: 1585296
Strand: Reverse
Name: 157369695
Synonym: Spro_1452
Alternate gene names: NA
Gene position: 1585296-1584643 (Counterclockwise)
Preceding gene: 157369699
Following gene: 157369694
Centisome position: 29.09
GC content: 59.94
Gene sequence:
>654_bases ATGTCAAGAATAAACTTGGAAAATGGCGGTAGCCCCGCACAATCGGTCAGTGACCGTTTGCTGACACTATTGAAAACCCG CGGCCCACAGCAAGCGTCTGATGCAGGAAAAGTCCTTGGTACCACCGGCGAGGCCGCGCGCCAGCAGTTCGTCAAGCTGG CGAAAGATGGGCTGGTTGAAGCCGTGGCGGAAACCCGTGGCGTCGGCCGACCAGTGCAGCTCTGGCACCTGACTGCCGCA GGCAATGCACGCTTTCCGGACACCCATTCCGAACTGACGGTACAACTGCTGCGCACCGTTCGCGACAAGCTGGGCGAACA GGCCATCGAGCTGTTGATCGACACCCGCGAGCAGGAAACGCGCATTAACTACAAGCAGGCGATGGTCGGCGCCACCGATT TGCAGGAACGCGTAGCGCGCCTGACGGCGATCCGTTGTCGCGAAGGCTACATGGCCGAGTCGCGCCTGCAGGAAGACGGT TCTTTTCTGCTGGTAGAAAACCACTGCCCTATTTGCGCCGCCGCCACCGTTTGTCAGGGGTTCTGCCGCGCGGAACTGAG TGTTTTTACCGAGGTGCTGCAGGCTCAGGTTGAACGCTCAGAGCATATTCTGGCCGGTGCGCGCCGCTGCGCCTACCGTA TTTCACTGCTGTAA
Upstream 100 bases:
>100_bases GTCGTCCTGTTTTCAGAGGAATGGCATTGAGTTAAGGGTGATATTGCGTTAAATTTAACAAGAATTATCTTGGAATAAGA GTAGGGCGAGGCGGAGAAAT
Downstream 100 bases:
>100_bases CCGACATCCGGCACAAGGCAGCCCACCGGCTGGCGTCATCCGATGAGTCACCACCGGAAAGCCAGCCCATTGTTCGCTTA AAAAAGTACTGAAAAGCGTT
Product: putative transcriptional regulator
Products: NA
Alternate protein names: ArsR Family Transcriptional Regulator; HTH Domain Family; Regulatory Protein ArsR; Transcriptional Regulatory Protein; DeoR Family Transcriptional Regulator; Transcription Regulator Protein; MarR Family Transcriptional Regulator; SufR Family Transcriptional Regulator; Regulatory Proteins AsnC Family Protein; Transcriptional Regulator DeoR Family; Transcriptional Regulator Protein; Iron-Sulfur Cluster Biosynthesis Transcriptional Regulator; Helix-Turn-Helix Type; Sugar-Specific Transcriptional Regulator TrmB; HTH Domain Family Protein; Transcriptional Regulator TrmB
Number of amino acids: Translated: 217; Mature: 216
Protein sequence:
>217_residues MSRINLENGGSPAQSVSDRLLTLLKTRGPQQASDAGKVLGTTGEAARQQFVKLAKDGLVEAVAETRGVGRPVQLWHLTAA GNARFPDTHSELTVQLLRTVRDKLGEQAIELLIDTREQETRINYKQAMVGATDLQERVARLTAIRCREGYMAESRLQEDG SFLLVENHCPICAAATVCQGFCRAELSVFTEVLQAQVERSEHILAGARRCAYRISLL
Sequences:
>Translated_217_residues MSRINLENGGSPAQSVSDRLLTLLKTRGPQQASDAGKVLGTTGEAARQQFVKLAKDGLVEAVAETRGVGRPVQLWHLTAA GNARFPDTHSELTVQLLRTVRDKLGEQAIELLIDTREQETRINYKQAMVGATDLQERVARLTAIRCREGYMAESRLQEDG SFLLVENHCPICAAATVCQGFCRAELSVFTEVLQAQVERSEHILAGARRCAYRISLL >Mature_216_residues SRINLENGGSPAQSVSDRLLTLLKTRGPQQASDAGKVLGTTGEAARQQFVKLAKDGLVEAVAETRGVGRPVQLWHLTAAG NARFPDTHSELTVQLLRTVRDKLGEQAIELLIDTREQETRINYKQAMVGATDLQERVARLTAIRCREGYMAESRLQEDGS FLLVENHCPICAAATVCQGFCRAELSVFTEVLQAQVERSEHILAGARRCAYRISLL
Specific function: Unknown
COG id: COG2345
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23861; Mature: 23729
Theoretical pI: Translated: 7.81; Mature: 7.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRINLENGGSPAQSVSDRLLTLLKTRGPQQASDAGKVLGTTGEAARQQFVKLAKDGLVE CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHH AVAETRGVGRPVQLWHLTAAGNARFPDTHSELTVQLLRTVRDKLGEQAIELLIDTREQET HHHHHCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH RINYKQAMVGATDLQERVARLTAIRCREGYMAESRLQEDGSFLLVENHCPICAAATVCQG HHHHHHHHHCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEECCCCHHHHHHHHHH FCRAELSVFTEVLQAQVERSEHILAGARRCAYRISLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SRINLENGGSPAQSVSDRLLTLLKTRGPQQASDAGKVLGTTGEAARQQFVKLAKDGLVE CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHH AVAETRGVGRPVQLWHLTAAGNARFPDTHSELTVQLLRTVRDKLGEQAIELLIDTREQET HHHHHCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH RINYKQAMVGATDLQERVARLTAIRCREGYMAESRLQEDGSFLLVENHCPICAAATVCQG HHHHHHHHHCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEECCCCHHHHHHHHHH FCRAELSVFTEVLQAQVERSEHILAGARRCAYRISLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA