| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is hel [H]
Identifier: 157369699
GI number: 157369699
Start: 1588133
End: 1588963
Strand: Reverse
Name: hel [H]
Synonym: Spro_1456
Alternate gene names: 157369699
Gene position: 1588963-1588133 (Counterclockwise)
Preceding gene: 157369700
Following gene: 157369695
Centisome position: 29.16
GC content: 58.36
Gene sequence:
>831_bases ATGGCAGGAATAAATAAACAGAAAATGGCCCTTGGCACGGCGATCGGTATGGCGCTACTGACTCTGGCCGGCTGCGCGCA GCCACCAAAAACCGATCTGCAGGCCCAGCAACGCCTGGCAGATCAGTCCGTGCTGGCACTGAACTGGTTCCAGCAGTCCG GAGAATATCAGGCGCTGTCGCACCAGGCGTTCAACAGCGCCAAACTGGCCTTTGATCAGGCCAAGACCACGCCGGGCAAA AAGAAAGCCGTGGTGGTAGATCTGGACGAAACCATGCTGGACAACAGCCCGTATTCCGGCTGGCAGGCGCAGCAGGGCCA GCCTTTCGCCGCAGCCACCTGGGCCAAATGGTCGCAGGCAGAGCAAGCCGGTGCGGTTCCGGGTGCCGTGCAATTTGCCC GTTACGTCAACAGCCATCAGGGCACCATGTTCTACGTTTCCAACCGCAAGCAGTCTGAATACGCCGCCACGGTGGCTAAT ATGCAGAAACTGGGCTTTACCGGCATGTCGGAAAAAACCGTGCTGCTCAGTGGTGATACCTCCAACAAGCAGCCACGCTT CGACGCCATCAAAAACGCGGGTTACGATATTGTGGTCTACGCCGGTGACAACCTGAACGACTTCGGGGCCGCGACCTACC ACAAGGATAACGCACAGCGCCGCGCGTTTGTCGCCGACAACCAAAGCAAGTTCGGCACCGAATACATCGTGCTGCCGAAC CCGCTGTACGGCGACTGGGAAAGTGGCATGGCGCCGGACTATAACAAGCTGACGCCGGAGCAAAAACTGCAGATACGCCA ACAGGCTATCAAGACCTGGAACGGGCAGTGA
Upstream 100 bases:
>100_bases CTTCTTCGCCAGGCTCGGCTGGCAGCAGGATGCGTTACGCCAGTTTGAAATGACGATGACCTTAGGCACACCACAATAAC AAGCAGAGAGTGATTCATTT
Downstream 100 bases:
>100_bases TCCCTGCTCACCCGCTAATCTTGTAGGGGCGCCGCATGCTGCGCCCGGTATTCGCCCCAACGGACGACGGGGAAAGTTAC AGCAACTTATACATATAACT
Product: 5'-nucleotidase
Products: NA
Alternate protein names: Outer membrane protein P4; OMP P4 [H]
Number of amino acids: Translated: 276; Mature: 275
Protein sequence:
>276_residues MAGINKQKMALGTAIGMALLTLAGCAQPPKTDLQAQQRLADQSVLALNWFQQSGEYQALSHQAFNSAKLAFDQAKTTPGK KKAVVVDLDETMLDNSPYSGWQAQQGQPFAAATWAKWSQAEQAGAVPGAVQFARYVNSHQGTMFYVSNRKQSEYAATVAN MQKLGFTGMSEKTVLLSGDTSNKQPRFDAIKNAGYDIVVYAGDNLNDFGAATYHKDNAQRRAFVADNQSKFGTEYIVLPN PLYGDWESGMAPDYNKLTPEQKLQIRQQAIKTWNGQ
Sequences:
>Translated_276_residues MAGINKQKMALGTAIGMALLTLAGCAQPPKTDLQAQQRLADQSVLALNWFQQSGEYQALSHQAFNSAKLAFDQAKTTPGK KKAVVVDLDETMLDNSPYSGWQAQQGQPFAAATWAKWSQAEQAGAVPGAVQFARYVNSHQGTMFYVSNRKQSEYAATVAN MQKLGFTGMSEKTVLLSGDTSNKQPRFDAIKNAGYDIVVYAGDNLNDFGAATYHKDNAQRRAFVADNQSKFGTEYIVLPN PLYGDWESGMAPDYNKLTPEQKLQIRQQAIKTWNGQ >Mature_275_residues AGINKQKMALGTAIGMALLTLAGCAQPPKTDLQAQQRLADQSVLALNWFQQSGEYQALSHQAFNSAKLAFDQAKTTPGKK KAVVVDLDETMLDNSPYSGWQAQQGQPFAAATWAKWSQAEQAGAVPGAVQFARYVNSHQGTMFYVSNRKQSEYAATVANM QKLGFTGMSEKTVLLSGDTSNKQPRFDAIKNAGYDIVVYAGDNLNDFGAATYHKDNAQRRAFVADNQSKFGTEYIVLPNP LYGDWESGMAPDYNKLTPEQKLQIRQQAIKTWNGQ
Specific function: Unknown
COG id: COG2503
COG function: function code R; Predicted secreted acid phosphatase
Gene ontology:
Cell location: Cell outer membrane; Lipid-anchor [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005519 - InterPro: IPR023214 - InterPro: IPR006423 [H]
Pfam domain/function: PF03767 Acid_phosphat_B [H]
EC number: NA
Molecular weight: Translated: 30277; Mature: 30146
Theoretical pI: Translated: 9.12; Mature: 9.12
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGINKQKMALGTAIGMALLTLAGCAQPPKTDLQAQQRLADQSVLALNWFQQSGEYQALS CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHEEEHHHHHCCCHHHHH HQAFNSAKLAFDQAKTTPGKKKAVVVDLDETMLDNSPYSGWQAQQGQPFAAATWAKWSQA HHHCCCHHHHHHHHCCCCCCCEEEEEECHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH EQAGAVPGAVQFARYVNSHQGTMFYVSNRKQSEYAATVANMQKLGFTGMSEKTVLLSGDT HHHCCCCHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCC SNKQPRFDAIKNAGYDIVVYAGDNLNDFGAATYHKDNAQRRAFVADNQSKFGTEYIVLPN CCCCCCHHHHHCCCCEEEEEECCCCCCCCCCEEECCCCCCEEEEECCCCCCCCEEEEECC PLYGDWESGMAPDYNKLTPEQKLQIRQQAIKTWNGQ CCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure AGINKQKMALGTAIGMALLTLAGCAQPPKTDLQAQQRLADQSVLALNWFQQSGEYQALS CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHEEEHHHHHCCCHHHHH HQAFNSAKLAFDQAKTTPGKKKAVVVDLDETMLDNSPYSGWQAQQGQPFAAATWAKWSQA HHHCCCHHHHHHHHCCCCCCCEEEEEECHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH EQAGAVPGAVQFARYVNSHQGTMFYVSNRKQSEYAATVANMQKLGFTGMSEKTVLLSGDT HHHCCCCHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCC SNKQPRFDAIKNAGYDIVVYAGDNLNDFGAATYHKDNAQRRAFVADNQSKFGTEYIVLPN CCCCCCHHHHHCCCCEEEEEECCCCCCCCCCEEECCCCCCEEEEECCCCCCCCEEEEECC PLYGDWESGMAPDYNKLTPEQKLQIRQQAIKTWNGQ CCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1715322; 7542800 [H]