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The map label for this gene is tse [H]

Identifier: 157369658

GI number: 157369658

Start: 1541308

End: 1542948

Strand: Reverse

Name: tse [H]

Synonym: Spro_1415

Alternate gene names: 157369658

Gene position: 1542948-1541308 (Counterclockwise)

Preceding gene: 157369659

Following gene: 157369651

Centisome position: 28.32

GC content: 50.4

Gene sequence:

>1641_bases
ATGTTTGAACGATTAAAAATCTCCCACGGATTAATGGGGATTTTAACCCTGTTCTGTATTATTCAGATATTCTCCGGCGC
GTGGAGCATTCTGGATGCCTCCGGTACCAATAACCGCCTTACACAAATATCCTCCGGCTTTAATCAAATCATGGCAATGG
ATAATGCCTACGCTTCCGTTACCGAACTCCGCGAAGAAGTGCTTAAAGACGCACTGATGCTCACCACGCAGCCGCAAAGT
AACGATACCAAAAAATCCCTTGGTGAACTTCGTCAGCGCCTCGCAGAGGTGGATAAACTGATGGAAAAATTTTATCGGCT
GTCACAGTCTGAGCAGAGTGAAAACGAGCGCACCAAGAACGTCAAAAATCTGTATGAAAAAGCGCGCGGCGATCTGCTTC
AATTAATTATCAGCCTGGAAGATGGCGATATCACCCGTTTCCAGTCAATTATGCACAATAGCTCGTCAACATATTTTATG
TCTGCGCTTGATGATACTTCGGCCTACGTTGCCAACGATATTATTACTCCAGCAGCCGCTGCGGCACAGACCAGCTATCG
CCAAATGGTGCCTTTATCGCTCGCGTTCATTTTCATCTTTATTCTGCTGACCGGTGCGGTTCTGGTGTGGATCAGAAAAT
ATGTGCTGAACAAGATAAACCAGATTATCGACTATCAGGCCGAAATTTCGAACAGGAATTTGGATATTGAAATTAATGCC
GGTGGAAATAACGAAATAGGCCGACTGATTAACGGTCTCATCAATATGCGTAATGAGCTGGCTAATACCGTCTGCACCGT
CCGTGCAGGAACGCAAAACATTTATACCGGCGTGCAGGAAATTGCAGCAGGTAACAATGACCTTTCAAGCCGCACAGAAG
AACAGGCGAGTTCGCTGGAAGAAACGGCGGCCAGCATGGAGCAACTCTCTGCGACGGTGAAAAACAACGCAGATAGCGCC
GCGGCTGCCACCTCGTTGGTGAAACGCGCTTCGCAAAGTGCAATCAACGGCGGTGAGATCACGCGCAAAATGGTCGTCAC
CATGAGCGATATCGCCGATAGCTCACGCAAAATTGGTGATATCACCAGCGTCATCGACGGCATCGCCTTCCAAACCAATA
TTTTGGCACTGAATGCCGCGGTGGAGGCGGCTCGCGCTGGTGAACAAGGCCGCGGCTTTGCCGTTGTCGCCGGCGAAGTG
CGTAATCTTGCTCAGCGCAGCGCTCAGGCGGCCAAAGAGATTAAAACGCTGATTGATACATCGGTGCTGCGTGTCGATCA
GGGCAACGATCTGGTGGAAAACGTGAGCGGAGCCATGACGGAAATTGTTACCGCCATCGGTCAGGTAACGGAAACCATGC
AAGAGATCTCAAGTGCTTCTGAAGAGCAGAGCCGTGGAATTGCACAAATTGCGCAGGCAGTTAACGAAATGGATAAGGTG
ACCCAGCAGAACGCCGCGCTGGTCGAACAATCGGCTTCGGCCGCCAGTGCGCTGGAAGATCAGGCCAATCACTTGAATCA
AACCGTCTCCCTTTTCAAACTCGCCACACACGCGTCCGCCGGGGTCCACGTTCAGCCACAGGCGATAGCCGCACCGAAAG
TGGTTGCTGATGATAACGGTGAGAATTGGAGCCGTTTTTGA

Upstream 100 bases:

>100_bases
CTAAAGTTTTAGCTCAGCCTGCCGAAAACAAACAGCACTTCTCGCGGCAAAAAAATGCTATTTGCCGCACTGGCATCTCA
TTGAAATTTCAGGTTGTACT

Downstream 100 bases:

>100_bases
GGCGCTAATAGATAAGATTTGAGTTTGATTTGTTGGCACCGTGCAGGTTTCGTTTACCTGCCCCGCCTAACGGCACTGAT
GGGTTAACGTCGCTGGTAGA

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 546; Mature: 546

Protein sequence:

>546_residues
MFERLKISHGLMGILTLFCIIQIFSGAWSILDASGTNNRLTQISSGFNQIMAMDNAYASVTELREEVLKDALMLTTQPQS
NDTKKSLGELRQRLAEVDKLMEKFYRLSQSEQSENERTKNVKNLYEKARGDLLQLIISLEDGDITRFQSIMHNSSSTYFM
SALDDTSAYVANDIITPAAAAAQTSYRQMVPLSLAFIFIFILLTGAVLVWIRKYVLNKINQIIDYQAEISNRNLDIEINA
GGNNEIGRLINGLINMRNELANTVCTVRAGTQNIYTGVQEIAAGNNDLSSRTEEQASSLEETAASMEQLSATVKNNADSA
AAATSLVKRASQSAINGGEITRKMVVTMSDIADSSRKIGDITSVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEV
RNLAQRSAQAAKEIKTLIDTSVLRVDQGNDLVENVSGAMTEIVTAIGQVTETMQEISSASEEQSRGIAQIAQAVNEMDKV
TQQNAALVEQSASAASALEDQANHLNQTVSLFKLATHASAGVHVQPQAIAAPKVVADDNGENWSRF

Sequences:

>Translated_546_residues
MFERLKISHGLMGILTLFCIIQIFSGAWSILDASGTNNRLTQISSGFNQIMAMDNAYASVTELREEVLKDALMLTTQPQS
NDTKKSLGELRQRLAEVDKLMEKFYRLSQSEQSENERTKNVKNLYEKARGDLLQLIISLEDGDITRFQSIMHNSSSTYFM
SALDDTSAYVANDIITPAAAAAQTSYRQMVPLSLAFIFIFILLTGAVLVWIRKYVLNKINQIIDYQAEISNRNLDIEINA
GGNNEIGRLINGLINMRNELANTVCTVRAGTQNIYTGVQEIAAGNNDLSSRTEEQASSLEETAASMEQLSATVKNNADSA
AAATSLVKRASQSAINGGEITRKMVVTMSDIADSSRKIGDITSVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEV
RNLAQRSAQAAKEIKTLIDTSVLRVDQGNDLVENVSGAMTEIVTAIGQVTETMQEISSASEEQSRGIAQIAQAVNEMDKV
TQQNAALVEQSASAASALEDQANHLNQTVSLFKLATHASAGVHVQPQAIAAPKVVADDNGENWSRF
>Mature_546_residues
MFERLKISHGLMGILTLFCIIQIFSGAWSILDASGTNNRLTQISSGFNQIMAMDNAYASVTELREEVLKDALMLTTQPQS
NDTKKSLGELRQRLAEVDKLMEKFYRLSQSEQSENERTKNVKNLYEKARGDLLQLIISLEDGDITRFQSIMHNSSSTYFM
SALDDTSAYVANDIITPAAAAAQTSYRQMVPLSLAFIFIFILLTGAVLVWIRKYVLNKINQIIDYQAEISNRNLDIEINA
GGNNEIGRLINGLINMRNELANTVCTVRAGTQNIYTGVQEIAAGNNDLSSRTEEQASSLEETAASMEQLSATVKNNADSA
AAATSLVKRASQSAINGGEITRKMVVTMSDIADSSRKIGDITSVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEV
RNLAQRSAQAAKEIKTLIDTSVLRVDQGNDLVENVSGAMTEIVTAIGQVTETMQEISSASEEQSRGIAQIAQAVNEMDKV
TQQNAALVEQSASAASALEDQANHLNQTVSLFKLATHASAGVHVQPQAIAAPKVVADDNGENWSRF

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788194, Length=534, Percent_Identity=42.5093632958801, Blast_Score=352, Evalue=4e-98,
Organism=Escherichia coli, GI1788195, Length=567, Percent_Identity=42.6807760141093, Blast_Score=334, Evalue=8e-93,
Organism=Escherichia coli, GI2367378, Length=560, Percent_Identity=42.3214285714286, Blast_Score=330, Evalue=1e-91,
Organism=Escherichia coli, GI1787690, Length=338, Percent_Identity=52.3668639053254, Blast_Score=319, Evalue=3e-88,
Organism=Escherichia coli, GI1789453, Length=321, Percent_Identity=39.2523364485981, Blast_Score=210, Evalue=2e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 59114; Mature: 59114

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFERLKISHGLMGILTLFCIIQIFSGAWSILDASGTNNRLTQISSGFNQIMAMDNAYASV
CCCCHHHHCCHHHHHHHHHHHHHHHCHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
TELREEVLKDALMLTTQPQSNDTKKSLGELRQRLAEVDKLMEKFYRLSQSEQSENERTKN
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
VKNLYEKARGDLLQLIISLEDGDITRFQSIMHNSSSTYFMSALDDTSAYVANDIITPAAA
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEHHCCHHHHHHHHHCCCHHH
AAQTSYRQMVPLSLAFIFIFILLTGAVLVWIRKYVLNKINQIIDYQAEISNRNLDIEINA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEC
GGNNEIGRLINGLINMRNELANTVCTVRAGTQNIYTGVQEIAAGNNDLSSRTEEQASSLE
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
ETAASMEQLSATVKNNADSAAAATSLVKRASQSAINGGEITRKMVVTMSDIADSSRKIGD
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
ITSVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRNLAQRSAQAAKEIKTLIDT
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHH
SVLRVDQGNDLVENVSGAMTEIVTAIGQVTETMQEISSASEEQSRGIAQIAQAVNEMDKV
HHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHH
TQQNAALVEQSASAASALEDQANHLNQTVSLFKLATHASAGVHVQPQAIAAPKVVADDNG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCHHHCCCCEEECCCC
ENWSRF
CCCCCC
>Mature Secondary Structure
MFERLKISHGLMGILTLFCIIQIFSGAWSILDASGTNNRLTQISSGFNQIMAMDNAYASV
CCCCHHHHCCHHHHHHHHHHHHHHHCHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
TELREEVLKDALMLTTQPQSNDTKKSLGELRQRLAEVDKLMEKFYRLSQSEQSENERTKN
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
VKNLYEKARGDLLQLIISLEDGDITRFQSIMHNSSSTYFMSALDDTSAYVANDIITPAAA
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEHHCCHHHHHHHHHCCCHHH
AAQTSYRQMVPLSLAFIFIFILLTGAVLVWIRKYVLNKINQIIDYQAEISNRNLDIEINA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEC
GGNNEIGRLINGLINMRNELANTVCTVRAGTQNIYTGVQEIAAGNNDLSSRTEEQASSLE
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
ETAASMEQLSATVKNNADSAAAATSLVKRASQSAINGGEITRKMVVTMSDIADSSRKIGD
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
ITSVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRNLAQRSAQAAKEIKTLIDT
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHH
SVLRVDQGNDLVENVSGAMTEIVTAIGQVTETMQEISSASEEQSRGIAQIAQAVNEMDKV
HHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHH
TQQNAALVEQSASAASALEDQANHLNQTVSLFKLATHASAGVHVQPQAIAAPKVVADDNG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCHHHCCCCEEECCCC
ENWSRF
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2496104 [H]