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The map label for this gene is yjjM [H]

Identifier: 157369651

GI number: 157369651

Start: 1534607

End: 1535512

Strand: Reverse

Name: yjjM [H]

Synonym: Spro_1408

Alternate gene names: 157369651

Gene position: 1535512-1534607 (Counterclockwise)

Preceding gene: 157369658

Following gene: 157369650

Centisome position: 28.18

GC content: 54.53

Gene sequence:

>906_bases
ATGAGCAGAACCCAGAACCTGCGCCACAATGTGGTTAACCAGATGATTGACGGTATCAATAATAACCACCTGCGCTCGCC
GCTGCCGTCCCAGGCCGCATTGGCCGAAATGTACAACATCAGCCGCACCACGGTGCGCCATACGTTGACGCATCTGTTCC
AACGCGGCGTGCTGGAAAAGGTCGGCGACGACTATGTGATTTTACGCCAGCCACAGCCGGAAGACGGTTTCGACTGCCAA
AGCCCTTCCCTGGACGAGCAGGGAAAAAGGTTCGAAAAAGCGTTCTACCAGATGATTAATCAGAAACAGCTGCGCGCCGG
GGACAGCTTCAGCGAGCTGCAACTGGCGCGCGCGGTCAATGTAAGCCCGGTGGTGGTGCGGGAATTTCTGCTGCACTTCA
GCCGTTACAATCTGATCGAAAGCAGCAAGCGCGGGCAATGGCGTATGAAGCAGTTTGACCAGCGTTATGCCGAACAGCTG
TTCGAGCTGCGCCAGATGCTGGAAACGCACGCCCTGTCCCACTTTATCAATCTGCCGGCGCATGACCCACGCTGGCTGCA
GGCCAGGGAACTGCTGAGCCGCCACCGCCAATTACGGGAAGACATCAGCGACAATTATCGCCTGTTTTCCCAGTTGGATC
GCGACTTCCACCTGCTGATCCTTTCCGCCGCCAATAACCCTTTTTTCAATCAGTCGCTGGAGATCATTTCGGTGATTTTC
CACTTCCATTATCAGTGGGATGAGACCGATCTTAAACAGCGTAATATCATTGCCATTGAAGAACACATGACCATTCTCAG
CGCGCTGATTTGCCGTAACGATCAGGAAGCCATCAACGCGCTGCACCGCCATTTGGATACCGCCAAACAGTCGATGATCC
GCTCACTCAATCAGACCATCGCCTGA

Upstream 100 bases:

>100_bases
AGCGCCGCCAAGCATGAAGTCGGAAGCGAGATCTGTGAAGCAGTACAAAATAAACCGCTTTAAATTGGTTTTAAATAGAT
AAAAAACATCCGAGGCTCGC

Downstream 100 bases:

>100_bases
GCCGCAGGGTGTTTTTAATCGATAAAAAACACCCTACCGTCATTTAAAACCGATAAAAAGCAGCAAAATACTGGCTGTCG
CACGGAACCGTAACAAAACC

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 300

Protein sequence:

>301_residues
MSRTQNLRHNVVNQMIDGINNNHLRSPLPSQAALAEMYNISRTTVRHTLTHLFQRGVLEKVGDDYVILRQPQPEDGFDCQ
SPSLDEQGKRFEKAFYQMINQKQLRAGDSFSELQLARAVNVSPVVVREFLLHFSRYNLIESSKRGQWRMKQFDQRYAEQL
FELRQMLETHALSHFINLPAHDPRWLQARELLSRHRQLREDISDNYRLFSQLDRDFHLLILSAANNPFFNQSLEIISVIF
HFHYQWDETDLKQRNIIAIEEHMTILSALICRNDQEAINALHRHLDTAKQSMIRSLNQTIA

Sequences:

>Translated_301_residues
MSRTQNLRHNVVNQMIDGINNNHLRSPLPSQAALAEMYNISRTTVRHTLTHLFQRGVLEKVGDDYVILRQPQPEDGFDCQ
SPSLDEQGKRFEKAFYQMINQKQLRAGDSFSELQLARAVNVSPVVVREFLLHFSRYNLIESSKRGQWRMKQFDQRYAEQL
FELRQMLETHALSHFINLPAHDPRWLQARELLSRHRQLREDISDNYRLFSQLDRDFHLLILSAANNPFFNQSLEIISVIF
HFHYQWDETDLKQRNIIAIEEHMTILSALICRNDQEAINALHRHLDTAKQSMIRSLNQTIA
>Mature_300_residues
SRTQNLRHNVVNQMIDGINNNHLRSPLPSQAALAEMYNISRTTVRHTLTHLFQRGVLEKVGDDYVILRQPQPEDGFDCQS
PSLDEQGKRFEKAFYQMINQKQLRAGDSFSELQLARAVNVSPVVVREFLLHFSRYNLIESSKRGQWRMKQFDQRYAEQLF
ELRQMLETHALSHFINLPAHDPRWLQARELLSRHRQLREDISDNYRLFSQLDRDFHLLILSAANNPFFNQSLEIISVIFH
FHYQWDETDLKQRNIIAIEEHMTILSALICRNDQEAINALHRHLDTAKQSMIRSLNQTIA

Specific function: May be a positive transcriptional regulator for yjjM and/or yjjN. Is essential for growth on L-galactonate as the sole carbon source [H]

COG id: COG1802

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI48995005, Length=298, Percent_Identity=71.8120805369127, Blast_Score=455, Evalue=1e-129,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011711
- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07729 FCD; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 35487; Mature: 35356

Theoretical pI: Translated: 7.88; Mature: 7.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRTQNLRHNVVNQMIDGINNNHLRSPLPSQAALAEMYNISRTTVRHTLTHLFQRGVLEK
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGDDYVILRQPQPEDGFDCQSPSLDEQGKRFEKAFYQMINQKQLRAGDSFSELQLARAVN
CCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC
VSPVVVREFLLHFSRYNLIESSKRGQWRMKQFDQRYAEQLFELRQMLETHALSHFINLPA
CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
HDPRWLQARELLSRHRQLREDISDNYRLFSQLDRDFHLLILSAANNPFFNQSLEIISVIF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHH
HFHYQWDETDLKQRNIIAIEEHMTILSALICRNDQEAINALHRHLDTAKQSMIRSLNQTI
HHHHCCCCCCHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
A
C
>Mature Secondary Structure 
SRTQNLRHNVVNQMIDGINNNHLRSPLPSQAALAEMYNISRTTVRHTLTHLFQRGVLEK
CCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGDDYVILRQPQPEDGFDCQSPSLDEQGKRFEKAFYQMINQKQLRAGDSFSELQLARAVN
CCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC
VSPVVVREFLLHFSRYNLIESSKRGQWRMKQFDQRYAEQLFELRQMLETHALSHFINLPA
CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
HDPRWLQARELLSRHRQLREDISDNYRLFSQLDRDFHLLILSAANNPFFNQSLEIISVIF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHH
HFHYQWDETDLKQRNIIAIEEHMTILSALICRNDQEAINALHRHLDTAKQSMIRSLNQTI
HHHHCCCCCCHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
A
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]