Definition | Serratia proteamaculans 568 chromosome, complete genome. |
---|---|
Accession | NC_009832 |
Length | 5,448,853 |
Click here to switch to the map view.
The map label for this gene is wrbA [H]
Identifier: 157369423
GI number: 157369423
Start: 1297673
End: 1298224
Strand: Direct
Name: wrbA [H]
Synonym: Spro_1180
Alternate gene names: 157369423
Gene position: 1297673-1298224 (Clockwise)
Preceding gene: 157369422
Following gene: 157369424
Centisome position: 23.82
GC content: 56.34
Gene sequence:
>552_bases ATGGCGAAGACAGTGGTTATTTTTCATTCCGGCTACGGCCACACCGAGCGTTTGGCAAAGGTTGTTGCCGAAGGCGCGGC AGCGGAACTGATCGCTATCGATCAGGAAGGCAATATCAGCGATGAAGCCTGGCAGAAACTCGATGAGGCGGATGCTATTA TTTTTGGTTCGCCGACCTATATGGGTGGCCCGTCCTGGCAGTTCAAAAAGTTTGCCGATGCCAGTTCTAAAGCCTGGTTT GGCCGTAAGTGGCAGGACAAGGTTTTCGGTGGGTTCACCAACAGCGCCAGCCTGAACGGTGACAAGCAGGTTACGCTGAT CGCTCTGCAAACTCTGGCCTCGCAGCATGGTGGCCTGTGGGTCAGCCTGGGGCTGATGCCCGCGAATACCAAGTCGGCGC AGCGTACCGATATAAACAACCTGGGCGGTTCGGTAGGGTTATTGGTGCAGACACCCGCCGATGCCGGTGTGGATGAAATG CTGTCGGGTGATTTGGAAACCGCCAGCCTTTACGGCCAGCGCGTGGCGGGCTTTGCTGCCAAACTGGCTTAA
Upstream 100 bases:
>100_bases CAGATAAATTTGGTATTCACCCCAGGGTCAGTTGATTAGATTGGATAAGAATATCCTCGGGTGCCGTCGGCACTCTACTG CAACGATCTGGGAGTTCCTA
Downstream 100 bases:
>100_bases TAGCCATTCCCCATTCGCTCATTTTTTCTACACAATTGCAGCGTAAAGTGGGGAATGTTATTAGCCTGCTTGGGCTAACA CTGCATTTCGTACAAACATT
Product: flavodoxin/nitric oxide synthase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 183; Mature: 182
Protein sequence:
>183_residues MAKTVVIFHSGYGHTERLAKVVAEGAAAELIAIDQEGNISDEAWQKLDEADAIIFGSPTYMGGPSWQFKKFADASSKAWF GRKWQDKVFGGFTNSASLNGDKQVTLIALQTLASQHGGLWVSLGLMPANTKSAQRTDINNLGGSVGLLVQTPADAGVDEM LSGDLETASLYGQRVAGFAAKLA
Sequences:
>Translated_183_residues MAKTVVIFHSGYGHTERLAKVVAEGAAAELIAIDQEGNISDEAWQKLDEADAIIFGSPTYMGGPSWQFKKFADASSKAWF GRKWQDKVFGGFTNSASLNGDKQVTLIALQTLASQHGGLWVSLGLMPANTKSAQRTDINNLGGSVGLLVQTPADAGVDEM LSGDLETASLYGQRVAGFAAKLA >Mature_182_residues AKTVVIFHSGYGHTERLAKVVAEGAAAELIAIDQEGNISDEAWQKLDEADAIIFGSPTYMGGPSWQFKKFADASSKAWFG RKWQDKVFGGFTNSASLNGDKQVTLIALQTLASQHGGLWVSLGLMPANTKSAQRTDINNLGGSVGLLVQTPADAGVDEML SGDLETASLYGQRVAGFAAKLA
Specific function: Seems To Enhance The Formation And/Or Stability Of Noncovalent Complexes Between The Trp Repressor Protein And Operator-Bearing DNA. However, Wrba Does Not Specifically Influence The Affinity Or Mode Of Binding Of Trpr To Its Operator. It Seems Possible T
COG id: COG0655
COG function: function code R; Multimeric flavodoxin WrbA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 flavodoxin-like domain [H]
Homologues:
Organism=Escherichia coli, GI1787239, Length=202, Percent_Identity=29.2079207920792, Blast_Score=66, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008254 - InterPro: IPR010089 - InterPro: IPR005025 [H]
Pfam domain/function: PF03358 FMN_red [H]
EC number: NA
Molecular weight: Translated: 19365; Mature: 19234
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: PS00201 FLAVODOXIN ; PS50902 FLAVODOXIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKTVVIFHSGYGHTERLAKVVAEGAAAELIAIDQEGNISDEAWQKLDEADAIIFGSPTY CCEEEEEEECCCCCHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHCCEEEECCCCC MGGPSWQFKKFADASSKAWFGRKWQDKVFGGFTNSASLNGDKQVTLIALQTLASQHGGLW CCCCCCCHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCEEEHHHHHHHHHCCCCEE VSLGLMPANTKSAQRTDINNLGGSVGLLVQTPADAGVDEMLSGDLETASLYGQRVAGFAA EEEEEEECCCCCCCCCCHHHCCCCEEEEEECCCCCCHHHHHCCCCHHHHHHHHHHHHHHH KLA HCC >Mature Secondary Structure AKTVVIFHSGYGHTERLAKVVAEGAAAELIAIDQEGNISDEAWQKLDEADAIIFGSPTY CEEEEEEECCCCCHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHCCEEEECCCCC MGGPSWQFKKFADASSKAWFGRKWQDKVFGGFTNSASLNGDKQVTLIALQTLASQHGGLW CCCCCCCHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCEEEHHHHHHHHHCCCCEE VSLGLMPANTKSAQRTDINNLGGSVGLLVQTPADAGVDEMLSGDLETASLYGQRVAGFAA EEEEEEECCCCCCCCCCHHHCCCCEEEEEECCCCCCHHHHHCCCCHHHHHHHHHHHHHHH KLA HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA