| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is tgt [H]
Identifier: 157369304
GI number: 157369304
Start: 1167916
End: 1169040
Strand: Direct
Name: tgt [H]
Synonym: Spro_1061
Alternate gene names: 157369304
Gene position: 1167916-1169040 (Clockwise)
Preceding gene: 157369303
Following gene: 157369305
Centisome position: 21.43
GC content: 53.07
Gene sequence:
>1125_bases GTGAAGTACGAATTAGACACAACCGATGGCCGCGCCCGCCGTGGCCGCCTGATTTTTGAACGTGGCGTGGTGGAAACCCC AGCCTTTATGCCGGTCGGCACCTACGGCACGGTAAAGGGCATGACGCCGGAAGAAGTGAAAGAGACCGGTGCGCAGATCC TGCTGGGCAACACCTTCCACCTGTGGCTGCGCCCAGGGCAGGAGATCATGAAGCTGCATGGCGATCTGCATGATTTCATG CAGTGGCATGGCCCGATCCTCACCGATTCAGGCGGCTTCCAGGTGTTCAGCCTGGGCGCGATGCGCAAGATTAAAGAGGA AGGCGTACATTTCCGTAACCCGATTAACGGCGATAAAGTGTTCCTCAGCCCGGAAAAATCGATGGAAATCCAGTATGACC TGGGGTCTGACATCGTGATGATCTTCGACGAATGTACGCCGTACCCGGCAGACTGGGACTACGCCAAAAGCTCGATGGAA ATGTCTCTGCGCTGGGCGCAGCGCAGCCGTCAGCGTTTTGACGAACTGAATAACAAGAACGCTTTATTCGGCATTATTCA GGGCGGTGTTTACGAAGATTTACGTGATGTATCAGTAAAAGGGCTGGTGGATATCGGTTTTGATGGTTACGCTGTGGGCG GCTTGGCAGTAGGTGAGCCAAAAGAGGATATGCATCGCATTCTTGAACATGTTTGCCCGCAAATTCCGGAAGATAAGCCA CGTTACCTGATGGGCGTTGGCAAACCGGAAGATCTGGTTGAAGGCGTGCGCCGCGGTATCGATATGTTCGACTGCGTGAT GCCAACGCGTAATGCCCGTAACGGCCATCTGTTCGTGACTGACGGTGTGGTAAAAATCCGTAATGCCAAGCACAAGGATG ATACTTCTCCGCTGGATAAAGACTGTGATTGCTACACGTGTCGCAATTACAGCCGCGCCTACTTGCATCATCTCGATCGT TGCAACGAAATACTCGGTGCCCGATTGAACACCATTCATAACCTGCGTCACTACCAACGCCTGATGGCGGGTTTACGCGA GGCCATTGAACAGGGTAAATTAGAGCTGTTTGTTGCGGATTTCTACGGTCGGATCGGTAAACCGGTTCCACCTTTAAACG CTTGA
Upstream 100 bases:
>100_bases GGCGGAGCAAGAGTCCGTCGGCGCCTGATTTCCTGGGCTGCGCATCTGGCGCAACCCTGTTTTAACGACATCAGACTGTT TCTCTGATGCTGGAGGCTTT
Downstream 100 bases:
>100_bases ATTAATAATTGATAACTTAATGAGGGAATTTCAATGAGCTTTTTCATTTCTGACGCCGTCGCATCCGCAGGAGCTCCGTC TCAGGGAAGCCCGTACTCTC
Product: queuine tRNA-ribosyltransferase
Products: NA
Alternate protein names: Guanine insertion enzyme; tRNA-guanine transglycosylase [H]
Number of amino acids: Translated: 374; Mature: 374
Protein sequence:
>374_residues MKYELDTTDGRARRGRLIFERGVVETPAFMPVGTYGTVKGMTPEEVKETGAQILLGNTFHLWLRPGQEIMKLHGDLHDFM QWHGPILTDSGGFQVFSLGAMRKIKEEGVHFRNPINGDKVFLSPEKSMEIQYDLGSDIVMIFDECTPYPADWDYAKSSME MSLRWAQRSRQRFDELNNKNALFGIIQGGVYEDLRDVSVKGLVDIGFDGYAVGGLAVGEPKEDMHRILEHVCPQIPEDKP RYLMGVGKPEDLVEGVRRGIDMFDCVMPTRNARNGHLFVTDGVVKIRNAKHKDDTSPLDKDCDCYTCRNYSRAYLHHLDR CNEILGARLNTIHNLRHYQRLMAGLREAIEQGKLELFVADFYGRIGKPVPPLNA
Sequences:
>Translated_374_residues MKYELDTTDGRARRGRLIFERGVVETPAFMPVGTYGTVKGMTPEEVKETGAQILLGNTFHLWLRPGQEIMKLHGDLHDFM QWHGPILTDSGGFQVFSLGAMRKIKEEGVHFRNPINGDKVFLSPEKSMEIQYDLGSDIVMIFDECTPYPADWDYAKSSME MSLRWAQRSRQRFDELNNKNALFGIIQGGVYEDLRDVSVKGLVDIGFDGYAVGGLAVGEPKEDMHRILEHVCPQIPEDKP RYLMGVGKPEDLVEGVRRGIDMFDCVMPTRNARNGHLFVTDGVVKIRNAKHKDDTSPLDKDCDCYTCRNYSRAYLHHLDR CNEILGARLNTIHNLRHYQRLMAGLREAIEQGKLELFVADFYGRIGKPVPPLNA >Mature_374_residues MKYELDTTDGRARRGRLIFERGVVETPAFMPVGTYGTVKGMTPEEVKETGAQILLGNTFHLWLRPGQEIMKLHGDLHDFM QWHGPILTDSGGFQVFSLGAMRKIKEEGVHFRNPINGDKVFLSPEKSMEIQYDLGSDIVMIFDECTPYPADWDYAKSSME MSLRWAQRSRQRFDELNNKNALFGIIQGGVYEDLRDVSVKGLVDIGFDGYAVGGLAVGEPKEDMHRILEHVCPQIPEDKP RYLMGVGKPEDLVEGVRRGIDMFDCVMPTRNARNGHLFVTDGVVKIRNAKHKDDTSPLDKDCDCYTCRNYSRAYLHHLDR CNEILGARLNTIHNLRHYQRLMAGLREAIEQGKLELFVADFYGRIGKPVPPLNA
Specific function: Exchanges the guanine residue with 7-aminomethyl-7- deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). After this exchange, a cyclopentendiol moiety is attached to the 7-aminomethyl group of 7-deazaguanine, resulting in the hyper
COG id: COG0343
COG function: function code J; Queuine/archaeosine tRNA-ribosyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the queuine tRNA-ribosyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI13654276, Length=368, Percent_Identity=42.3913043478261, Blast_Score=300, Evalue=1e-81, Organism=Homo sapiens, GI13375872, Length=227, Percent_Identity=27.3127753303965, Blast_Score=103, Evalue=3e-22, Organism=Escherichia coli, GI1786607, Length=374, Percent_Identity=89.572192513369, Blast_Score=707, Evalue=0.0, Organism=Caenorhabditis elegans, GI17544680, Length=375, Percent_Identity=42.1333333333333, Blast_Score=295, Evalue=3e-80, Organism=Caenorhabditis elegans, GI25146502, Length=171, Percent_Identity=32.1637426900585, Blast_Score=91, Evalue=8e-19, Organism=Drosophila melanogaster, GI19920510, Length=371, Percent_Identity=45.2830188679245, Blast_Score=321, Evalue=6e-88, Organism=Drosophila melanogaster, GI21355311, Length=253, Percent_Identity=29.6442687747036, Blast_Score=101, Evalue=8e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004803 - InterPro: IPR002616 [H]
Pfam domain/function: PF01702 TGT [H]
EC number: =2.4.2.29 [H]
Molecular weight: Translated: 42494; Mature: 42494
Theoretical pI: Translated: 6.57; Mature: 6.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYELDTTDGRARRGRLIFERGVVETPAFMPVGTYGTVKGMTPEEVKETGAQILLGNTFH CCEECCCCCCCHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCEEEECCEEE LWLRPGQEIMKLHGDLHDFMQWHGPILTDSGGFQVFSLGAMRKIKEEGVHFRNPINGDKV EEECCCHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEHHHHHHHHHCCCEECCCCCCCEE FLSPEKSMEIQYDLGSDIVMIFDECTPYPADWDYAKSSMEMSLRWAQRSRQRFDELNNKN EECCCCCCEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC ALFGIIQGGVYEDLRDVSVKGLVDIGFDGYAVGGLAVGEPKEDMHRILEHVCPQIPEDKP EEEEEECCCHHHHHHHCCCCEEEEECCCCEEECCEECCCCHHHHHHHHHHHCCCCCCCCC RYLMGVGKPEDLVEGVRRGIDMFDCVMPTRNARNGHLFVTDGVVKIRNAKHKDDTSPLDK CEEEECCCHHHHHHHHHHCCHHHHHHCCCCCCCCCEEEEECCEEEECCCCCCCCCCCCCC DCDCYTCRNYSRAYLHHLDRCNEILGARLNTIHNLRHYQRLMAGLREAIEQGKLELFVAD CCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEH FYGRIGKPVPPLNA HHHHCCCCCCCCCC >Mature Secondary Structure MKYELDTTDGRARRGRLIFERGVVETPAFMPVGTYGTVKGMTPEEVKETGAQILLGNTFH CCEECCCCCCCHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCEEEECCEEE LWLRPGQEIMKLHGDLHDFMQWHGPILTDSGGFQVFSLGAMRKIKEEGVHFRNPINGDKV EEECCCHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEHHHHHHHHHCCCEECCCCCCCEE FLSPEKSMEIQYDLGSDIVMIFDECTPYPADWDYAKSSMEMSLRWAQRSRQRFDELNNKN EECCCCCCEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC ALFGIIQGGVYEDLRDVSVKGLVDIGFDGYAVGGLAVGEPKEDMHRILEHVCPQIPEDKP EEEEEECCCHHHHHHHCCCCEEEEECCCCEEECCEECCCCHHHHHHHHHHHCCCCCCCCC RYLMGVGKPEDLVEGVRRGIDMFDCVMPTRNARNGHLFVTDGVVKIRNAKHKDDTSPLDK CEEEECCCHHHHHHHHHHCCHHHHHHCCCCCCCCCEEEEECCEEEECCCCCCCCCCCCCC DCDCYTCRNYSRAYLHHLDRCNEILGARLNTIHNLRHYQRLMAGLREAIEQGKLELFVAD CCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEH FYGRIGKPVPPLNA HHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA