| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is brnQ [H]
Identifier: 157369288
GI number: 157369288
Start: 1149404
End: 1150723
Strand: Direct
Name: brnQ [H]
Synonym: Spro_1045
Alternate gene names: 157369288
Gene position: 1149404-1150723 (Clockwise)
Preceding gene: 157369287
Following gene: 157369289
Centisome position: 21.09
GC content: 58.79
Gene sequence:
>1320_bases ATGAGTCATCGTTTAACGTCAAAAGATATTATTGCACTGGGTTTTATGACCTTTGCCTTATTCGTCGGCGCCGGGAATAT CATTTTCCCGCCGATGGTCGGTTTACAGTCCGGTGAACACGTCTGGACTGCAGCTATCGGCTTCCTGATCACTGCCGTCG GTCTACCGGTGATGACGGTGATCGCGTTGGCTCGTGTCGGTGGCGGCATTGACGCCCTGAGCACGCCAATTGGTCGTCGC GCCGGCCTGCTGCTGGCGACCGTCTGCTATCTGGCCGTCGGCCCACTATTCGCCACCCCGCGCACCGCGACCGTCTCCTT CGAAGTGGGCATTGCACCGCTGACCGGTGACGGTGCCATGCCGCTGTTTATTTACAGCCTGGTGTATTTCGCACTGGTGA TCGGCATCTCTCTGTATCCGGGCCGCTTGCTCGATACCGTCGGCCACGTACTGGCGCCGCTGAAAATTGTTGCGCTGGGC GCATTGGGTATTGCCGCGCTGGCCTGGCCTGCGGGCACGCCAATTCCGGCCACCGAGGTCTATCAGAACGTTCCATTCTC TACCGGCTTCGTTAACGGCTATCTGACCATGGATACGCTGGGCGCGCTGGTCTTCGGCATCGTCATCGTTAACGCCGCGC GTTCCCGTGGCGTGAAGGATGCCAAATTGCTGACGCGTTACACCATTCTGGCGGGTCTGATCGCCGGTGTCGGCCTGACG CTGGTTTACCTGAGCCTGTTCAAGCTGGGTTCCGGCAGCGGTGTGCTGGTGCCGGACGCCACCAACGGCGCGGTGATCTT GCATGCTTACGTACAGAACACTTTCGGTGGATTGGGCAGCTTCTTCCTGGCCGCGCTGATCTTCATTGCCTGTATGGTGA CTGCGGTTGGCCTGACCTGCGCCTGTGCCGAGTTCTTTGCCCAATACCTGCCGTTCTCTTACAAGACGCTGGTGTTCATT TTGGGTCTGTTCTCGATGCTGGTTTCCAACCTGGGCCTGAGCCATCTGATCCAGATCTCTATCCCGGTGCTGACCGCGAT TTATCCGCCGTGTATCGTGCTGGTGGTGCTGAGTTTCACTCAGCGCTGGTGGAACAGCGCGCCGCGTATCATCGCGCCGG TGATGTTAGTCAGCCTGTTGTTTGGTATCCTTGACGCGGTGAAAGCGTCCACCTTCCAGCACTTCCTGCCGGAGTGGACC AATCACCTGCCATTGGCGGATCAAGGGCTGGCATGGTTGCCGCCGTCGCTGCTGATGCTGGTGCTGGTCGCAATTTATGA CCGGGTTTGTTCGCGCTCCGAAGTGACCGCGCACTCTTAA
Upstream 100 bases:
>100_bases TTTGGTCTCGCGATGAAATGGCAAGCCGGCAACCGGGTGGGGCATAACGCCACCACGTATCGGACACTTTTTTTCATTTG AACAGGCAACACGACATCGT
Downstream 100 bases:
>100_bases TTCCCCGGCTAAATTTTGGGCCACGGACTTGTCCGTGGCTTTTTTACGTTTAAAAAACACGGGTTATCTTCATGCAACAA CAGTCACCCGCCGCTCCTGC
Product: branched-chain amino acid transport system II carrier protein
Products: L-leucine [Cytoplasm]; L-valine [Cytoplasm]; Na (I) [Cytoplasm]; L-iso-leucine [Cytoplasm] [C]
Alternate protein names: LIV-II [H]
Number of amino acids: Translated: 439; Mature: 438
Protein sequence:
>439_residues MSHRLTSKDIIALGFMTFALFVGAGNIIFPPMVGLQSGEHVWTAAIGFLITAVGLPVMTVIALARVGGGIDALSTPIGRR AGLLLATVCYLAVGPLFATPRTATVSFEVGIAPLTGDGAMPLFIYSLVYFALVIGISLYPGRLLDTVGHVLAPLKIVALG ALGIAALAWPAGTPIPATEVYQNVPFSTGFVNGYLTMDTLGALVFGIVIVNAARSRGVKDAKLLTRYTILAGLIAGVGLT LVYLSLFKLGSGSGVLVPDATNGAVILHAYVQNTFGGLGSFFLAALIFIACMVTAVGLTCACAEFFAQYLPFSYKTLVFI LGLFSMLVSNLGLSHLIQISIPVLTAIYPPCIVLVVLSFTQRWWNSAPRIIAPVMLVSLLFGILDAVKASTFQHFLPEWT NHLPLADQGLAWLPPSLLMLVLVAIYDRVCSRSEVTAHS
Sequences:
>Translated_439_residues MSHRLTSKDIIALGFMTFALFVGAGNIIFPPMVGLQSGEHVWTAAIGFLITAVGLPVMTVIALARVGGGIDALSTPIGRR AGLLLATVCYLAVGPLFATPRTATVSFEVGIAPLTGDGAMPLFIYSLVYFALVIGISLYPGRLLDTVGHVLAPLKIVALG ALGIAALAWPAGTPIPATEVYQNVPFSTGFVNGYLTMDTLGALVFGIVIVNAARSRGVKDAKLLTRYTILAGLIAGVGLT LVYLSLFKLGSGSGVLVPDATNGAVILHAYVQNTFGGLGSFFLAALIFIACMVTAVGLTCACAEFFAQYLPFSYKTLVFI LGLFSMLVSNLGLSHLIQISIPVLTAIYPPCIVLVVLSFTQRWWNSAPRIIAPVMLVSLLFGILDAVKASTFQHFLPEWT NHLPLADQGLAWLPPSLLMLVLVAIYDRVCSRSEVTAHS >Mature_438_residues SHRLTSKDIIALGFMTFALFVGAGNIIFPPMVGLQSGEHVWTAAIGFLITAVGLPVMTVIALARVGGGIDALSTPIGRRA GLLLATVCYLAVGPLFATPRTATVSFEVGIAPLTGDGAMPLFIYSLVYFALVIGISLYPGRLLDTVGHVLAPLKIVALGA LGIAALAWPAGTPIPATEVYQNVPFSTGFVNGYLTMDTLGALVFGIVIVNAARSRGVKDAKLLTRYTILAGLIAGVGLTL VYLSLFKLGSGSGVLVPDATNGAVILHAYVQNTFGGLGSFFLAALIFIACMVTAVGLTCACAEFFAQYLPFSYKTLVFIL GLFSMLVSNLGLSHLIQISIPVLTAIYPPCIVLVVLSFTQRWWNSAPRIIAPVMLVSLLFGILDAVKASTFQHFLPEWTN HLPLADQGLAWLPPSLLMLVLVAIYDRVCSRSEVTAHS
Specific function: Component of the LIV-II transport system for branched- chain amino acids. This LIV-II transport system may be H(+)- coupled [H]
COG id: COG1114
COG function: function code E; Branched-chain amino acid permeases
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the branched chain amino acid transporter family [H]
Homologues:
Organism=Escherichia coli, GI1786601, Length=439, Percent_Identity=76.3097949886105, Blast_Score=672, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004685 [H]
Pfam domain/function: PF05525 Branch_AA_trans [H]
EC number: NA
Molecular weight: Translated: 46370; Mature: 46239
Theoretical pI: Translated: 8.56; Mature: 8.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHRLTSKDIIALGFMTFALFVGAGNIIFPPMVGLQSGEHVWTAAIGFLITAVGLPVMTV CCCCCCCHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH IALARVGGGIDALSTPIGRRAGLLLATVCYLAVGPLFATPRTATVSFEVGIAPLTGDGAM HHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCCH PLFIYSLVYFALVIGISLYPGRLLDTVGHVLAPLKIVALGALGIAALAWPAGTPIPATEV HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH YQNVPFSTGFVNGYLTMDTLGALVFGIVIVNAARSRGVKDAKLLTRYTILAGLIAGVGLT HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH LVYLSLFKLGSGSGVLVPDATNGAVILHAYVQNTFGGLGSFFLAALIFIACMVTAVGLTC HHHHHHHHCCCCCEEEEECCCCCEEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH ACAEFFAQYLPFSYKTLVFILGLFSMLVSNLGLSHLIQISIPVLTAIYPPCIVLVVLSFT HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH QRWWNSAPRIIAPVMLVSLLFGILDAVKASTFQHFLPEWTNHLPLADQGLAWLPPSLLML HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH VLVAIYDRVCSRSEVTAHS HHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SHRLTSKDIIALGFMTFALFVGAGNIIFPPMVGLQSGEHVWTAAIGFLITAVGLPVMTV CCCCCCHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH IALARVGGGIDALSTPIGRRAGLLLATVCYLAVGPLFATPRTATVSFEVGIAPLTGDGAM HHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCCH PLFIYSLVYFALVIGISLYPGRLLDTVGHVLAPLKIVALGALGIAALAWPAGTPIPATEV HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH YQNVPFSTGFVNGYLTMDTLGALVFGIVIVNAARSRGVKDAKLLTRYTILAGLIAGVGLT HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH LVYLSLFKLGSGSGVLVPDATNGAVILHAYVQNTFGGLGSFFLAALIFIACMVTAVGLTC HHHHHHHHCCCCCEEEEECCCCCEEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH ACAEFFAQYLPFSYKTLVFILGLFSMLVSNLGLSHLIQISIPVLTAIYPPCIVLVVLSFT HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH QRWWNSAPRIIAPVMLVSLLFGILDAVKASTFQHFLPEWTNHLPLADQGLAWLPPSLLML HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH VLVAIYDRVCSRSEVTAHS HHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-leucine [Periplasm]; L-valine [Periplasm]; Na (I) [Periplasm]; L-iso-leucine [Periplasm] [C]
Specific reaction: Na (I) [Periplasm] + L-leucine [Periplasm] = Na (I) [Cytoplasm] + L-leucine [Cytoplasm] Na (I) [Periplasm] + L-valine [Periplasm] = Na (I) [Cytoplasm] + L-valine [Cytoplasm] Na (I) [Periplasm] + L-iso-leucine [Periplasm] = Na (I) [Cytoplasm] + L-iso-leuci
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]