| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is yjjX [C]
Identifier: 157368922
GI number: 157368922
Start: 745379
End: 745918
Strand: Reverse
Name: yjjX [C]
Synonym: Spro_0677
Alternate gene names: 157368922
Gene position: 745918-745379 (Counterclockwise)
Preceding gene: 157368924
Following gene: 157368919
Centisome position: 13.69
GC content: 56.85
Gene sequence:
>540_bases ATGTATCATGTTGTCGCTGCAACTACCAACCCGGCAAAGATCAAGGCTATTCAACTGGCCTTTGAGGACACTTTTGGCCA GGACCAATGCCGCATTGAATCGGTCGACGTCGCCAGTGGCGTTTCACTGCAACCCATAGGTAATCACGAAACCCGCACCG GTGCACGCCAGCGTGTTATGGAAGCGCGGCAGGTACGCCCTGAGGCCGACTTTTGGGTCGGCGTTGAGGCTGGAATCGAA GAGAATATGACTTTCGCCTGGATGACGGTGGAAAACCCGCAGACCCGTGGCGAATCGCGCTCAGCCAGCCTGATGCTGCC GGAGACGATTTTACAGGGAATTCGCGCCGGCCGCGAATTGGGCAGTGAAATGGCAACCATCACCGGCAATGCCGAAGTGA AACGCCAGGGCGGCGCTATTGGCATCTTTACCGATGGGCGGTTGAGCCGCACCAGCGTTTACCATCAGGCTCTGCTGCTG GCGCTGGTGCCTTTCCACAACCCGATCTACCAGAACCATAACAACGCGGCACAGAAATAA
Upstream 100 bases:
>100_bases GTTATACTGCGTGAAACCTGAGTTTATCGTCGTCAGATGCCGCTTGCGCAAACGCCTGACGTAGTGAATAGGCTCTTAGC TTAAGGATGCCAAACCCGTT
Downstream 100 bases:
>100_bases CCTTCGGTGGGCGCGGCGCTACTGCGCATCGCCCAGCAACTGCTGTTCCAGCCACTGTTTCAGCGCAGGCGTCGCCGCCT TCAGGCTGTTCGAACCGCGA
Product: NTPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 179; Mature: 179
Protein sequence:
>179_residues MYHVVAATTNPAKIKAIQLAFEDTFGQDQCRIESVDVASGVSLQPIGNHETRTGARQRVMEARQVRPEADFWVGVEAGIE ENMTFAWMTVENPQTRGESRSASLMLPETILQGIRAGRELGSEMATITGNAEVKRQGGAIGIFTDGRLSRTSVYHQALLL ALVPFHNPIYQNHNNAAQK
Sequences:
>Translated_179_residues MYHVVAATTNPAKIKAIQLAFEDTFGQDQCRIESVDVASGVSLQPIGNHETRTGARQRVMEARQVRPEADFWVGVEAGIE ENMTFAWMTVENPQTRGESRSASLMLPETILQGIRAGRELGSEMATITGNAEVKRQGGAIGIFTDGRLSRTSVYHQALLL ALVPFHNPIYQNHNNAAQK >Mature_179_residues MYHVVAATTNPAKIKAIQLAFEDTFGQDQCRIESVDVASGVSLQPIGNHETRTGARQRVMEARQVRPEADFWVGVEAGIE ENMTFAWMTVENPQTRGESRSASLMLPETILQGIRAGRELGSEMATITGNAEVKRQGGAIGIFTDGRLSRTSVYHQALLL ALVPFHNPIYQNHNNAAQK
Specific function: Unknown
COG id: COG1986
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0244 family
Homologues:
Organism=Escherichia coli, GI87082442, Length=170, Percent_Identity=57.0588235294118, Blast_Score=204, Evalue=4e-54,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y677_SERP5 (A8G9J3)
Other databases:
- EMBL: CP000826 - RefSeq: YP_001476911.1 - ProteinModelPortal: A8G9J3 - SMR: A8G9J3 - STRING: A8G9J3 - GeneID: 5605632 - GenomeReviews: CP000826_GR - KEGG: spe:Spro_0677 - eggNOG: COG1986 - HOGENOM: HBG541017 - OMA: ATFAYIA - ProtClustDB: PRK05074 - BioCyc: SPRO399741:SPRO_0677-MONOMER - HAMAP: MF_00648 - InterPro: IPR002786 - TIGRFAMs: TIGR00258
Pfam domain/function: PF01931 DUF84
EC number: NA
Molecular weight: Translated: 19663; Mature: 19663
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYHVVAATTNPAKIKAIQLAFEDTFGQDQCRIESVDVASGVSLQPIGNHETRTGARQRVM CEEEEEECCCCCEEEEEEEEECCCCCCCCEEEEEEECCCCCEECCCCCCCCHHHHHHHHH EARQVRPEADFWVGVEAGIEENMTFAWMTVENPQTRGESRSASLMLPETILQGIRAGREL HHHHCCCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCEEECHHHHHHHHHHHHHH GSEMATITGNAEVKRQGGAIGIFTDGRLSRTSVYHQALLLALVPFHNPIYQNHNNAAQK CCCEEEEECCCEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCC >Mature Secondary Structure MYHVVAATTNPAKIKAIQLAFEDTFGQDQCRIESVDVASGVSLQPIGNHETRTGARQRVM CEEEEEECCCCCEEEEEEEEECCCCCCCCEEEEEEECCCCCEECCCCCCCCHHHHHHHHH EARQVRPEADFWVGVEAGIEENMTFAWMTVENPQTRGESRSASLMLPETILQGIRAGREL HHHHCCCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCEEECHHHHHHHHHHHHHH GSEMATITGNAEVKRQGGAIGIFTDGRLSRTSVYHQALLLALVPFHNPIYQNHNNAAQK CCCEEEEECCCEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA