| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157368850
Identifier: 157368850
GI number: 157368850
Start: 670567
End: 671676
Strand: Reverse
Name: 157368850
Synonym: Spro_0605
Alternate gene names: NA
Gene position: 671676-670567 (Counterclockwise)
Preceding gene: 157368851
Following gene: 157368841
Centisome position: 12.33
GC content: 64.59
Gene sequence:
>1110_bases ATGTCGCAGCGCGCTCAGGATTTGGGCATTAAAATCGGCCACGGCGTTGCCGGCCCGCTGAACGCCATCACCGACGTGCC CGGCGTCCGCGTCGGCCACGCCAGCATCCACGCCGATCTGGCCGACGGCCGCAGCGTACGCACCGGCGTCACGGTGATCG AGCCACGGGCCGGACAGGCCCGGCAGTCACCCTGCTTTGCCGGGGTGCACGTACTCAACGGCAACGGCGACGCCACCGGG TTGGAGTGGATCCGTGAAGCCGGCCTGCTCACCAGCCCCATTGCCTTTACCAACACCCACAGCGTCGGCGTGGTGCGCGA CAGCCTGATCGCGCTGGAGCGCGAAACGCTACCCGCCGACGATAAGGCGGTGTACTGGAATATGCCGGTGGTGATGGAAA CCTTCGACGGCCTGCTCAACGACATCAACGGCTTTCACGTCAAGCCCGAGCATGTACGGCAGGCGCTGCAGGCAGCACAT AACGGTTTGCCACAGGAAGGTGCGGTCGGCGGCGGCAGCGGTATGATCTGCCATGAGTTTAAGGGCGGTATCGGCACCGC ATCCCGCCGTCTGCCTGCAGACCGTGGCGGTTGGACGGTCGGGGCCATCGTGCAGGCCAACCACGGCAAACGTACGTCGC TGCTGGTTGGCGGCTATCCGGTCGGTCGCCATCTGGGGCATATTCACTCGCCATTCACCCCGCAACTGCCACATCCGGGC ATGGGGTCAATTGTCGTCACGCTGGCCACCGACGCCCCGCTGTTGCCACACCAATGTACGCGTTTGGCCCAACGCGCCAG CATCGGCATTGCACGCACCGGCGGCGGTACCGAGGATTCGAGCGGCGATATTTTTATCGCCTTCGCCACCGGCAACGACG GGCTGCCGCCAGCCGACTACGCCGACAAAGGGGCCTTCACCACCGCACTGCGCATGGTGAATAACGATTATATCTCCGAG CTGTTTGCGGCGGCGGCCGAAGCGGTGGAGGAGGCAATTATCAATGCCCTGCTGGCGGCCAATACCCTTTCCGGTAACGG CCACCGGGCAGAAGGACTAAGTGCCGGGCAGTTGCTGACCGCGCTGGAACAAGCCGGCTGGCGAGCATAA
Upstream 100 bases:
>100_bases AATTCAAAGGCAATCTCAGCGTCCTCGACGTGGTGCTGAGCTACATGCGCAACCGGCAGGCCGTCCCGCTGGTTGAACCC TCAATTGAAGGAGAATAACC
Downstream 100 bases:
>100_bases GAGTAGAGGCGCGGCATGCCGCGCCCTGTATCAGTCAGGACTCACCACCCGGTTTGGGGGCCGGGTAGTCATAATCGAGC TTGATCGGTTCGGCGTAAAC
Product: peptidase S58 DmpA
Products: NA
Alternate protein names: D-Aminopeptidase; Aminopeptidase DmpA; L-Aminopeptidase/D-Esterase; Aminopeptidase; Peptidase S; T4 Family Peptidase; Peptidase T4 Family; Family; Aminopeptidase-Like Protein; L-Aminopeptidase DmpA; S58 Family Peptidase; D-Aminopeptidease; D-Amino Peptidase Dmpa Family; Serine Peptidase; D-AMINO PEPTIDASE DmpA Family; L-Aminopeptidase Dmpa; Aminopeptidase DpmA; D-Alanine-D-Alanine Ligase / Aminopeptidase; Peptidase Family; L-Aminopeptidase D-Ala-Esterase/Amidase
Number of amino acids: Translated: 369; Mature: 368
Protein sequence:
>369_residues MSQRAQDLGIKIGHGVAGPLNAITDVPGVRVGHASIHADLADGRSVRTGVTVIEPRAGQARQSPCFAGVHVLNGNGDATG LEWIREAGLLTSPIAFTNTHSVGVVRDSLIALERETLPADDKAVYWNMPVVMETFDGLLNDINGFHVKPEHVRQALQAAH NGLPQEGAVGGGSGMICHEFKGGIGTASRRLPADRGGWTVGAIVQANHGKRTSLLVGGYPVGRHLGHIHSPFTPQLPHPG MGSIVVTLATDAPLLPHQCTRLAQRASIGIARTGGGTEDSSGDIFIAFATGNDGLPPADYADKGAFTTALRMVNNDYISE LFAAAAEAVEEAIINALLAANTLSGNGHRAEGLSAGQLLTALEQAGWRA
Sequences:
>Translated_369_residues MSQRAQDLGIKIGHGVAGPLNAITDVPGVRVGHASIHADLADGRSVRTGVTVIEPRAGQARQSPCFAGVHVLNGNGDATG LEWIREAGLLTSPIAFTNTHSVGVVRDSLIALERETLPADDKAVYWNMPVVMETFDGLLNDINGFHVKPEHVRQALQAAH NGLPQEGAVGGGSGMICHEFKGGIGTASRRLPADRGGWTVGAIVQANHGKRTSLLVGGYPVGRHLGHIHSPFTPQLPHPG MGSIVVTLATDAPLLPHQCTRLAQRASIGIARTGGGTEDSSGDIFIAFATGNDGLPPADYADKGAFTTALRMVNNDYISE LFAAAAEAVEEAIINALLAANTLSGNGHRAEGLSAGQLLTALEQAGWRA >Mature_368_residues SQRAQDLGIKIGHGVAGPLNAITDVPGVRVGHASIHADLADGRSVRTGVTVIEPRAGQARQSPCFAGVHVLNGNGDATGL EWIREAGLLTSPIAFTNTHSVGVVRDSLIALERETLPADDKAVYWNMPVVMETFDGLLNDINGFHVKPEHVRQALQAAHN GLPQEGAVGGGSGMICHEFKGGIGTASRRLPADRGGWTVGAIVQANHGKRTSLLVGGYPVGRHLGHIHSPFTPQLPHPGM GSIVVTLATDAPLLPHQCTRLAQRASIGIARTGGGTEDSSGDIFIAFATGNDGLPPADYADKGAFTTALRMVNNDYISEL FAAAAEAVEEAIINALLAANTLSGNGHRAEGLSAGQLLTALEQAGWRA
Specific function: Unknown
COG id: COG3191
COG function: function code EQ; L-aminopeptidase/D-esterase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38376; Mature: 38245
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQRAQDLGIKIGHGVAGPLNAITDVPGVRVGHASIHADLADGRSVRTGVTVIEPRAGQA CCCCCCCCCEEECCCCCCCHHHHHCCCCCEECCCEEEEECCCCCEEECCEEEECCCCCCC RQSPCFAGVHVLNGNGDATGLEWIREAGLLTSPIAFTNTHSVGVVRDSLIALERETLPAD CCCCCEEEEEEEECCCCCHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCC DKAVYWNMPVVMETFDGLLNDINGFHVKPEHVRQALQAAHNGLPQEGAVGGGSGMICHEF CCEEEECCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEC KGGIGTASRRLPADRGGWTVGAIVQANHGKRTSLLVGGYPVGRHLGHIHSPFTPQLPHPG CCCCCCHHHCCCCCCCCEEEEEEEECCCCCCEEEEECCCCHHHHHCCCCCCCCCCCCCCC MGSIVVTLATDAPLLPHQCTRLAQRASIGIARTGGGTEDSSGDIFIAFATGNDGLPPADY CCCEEEEEECCCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCEEEEEECCCCCCCCCCC ADKGAFTTALRMVNNDYISELFAAAAEAVEEAIINALLAANTLSGNGHRAEGLSAGQLLT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH ALEQAGWRA HHHHCCCCC >Mature Secondary Structure SQRAQDLGIKIGHGVAGPLNAITDVPGVRVGHASIHADLADGRSVRTGVTVIEPRAGQA CCCCCCCCEEECCCCCCCHHHHHCCCCCEECCCEEEEECCCCCEEECCEEEECCCCCCC RQSPCFAGVHVLNGNGDATGLEWIREAGLLTSPIAFTNTHSVGVVRDSLIALERETLPAD CCCCCEEEEEEEECCCCCHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCC DKAVYWNMPVVMETFDGLLNDINGFHVKPEHVRQALQAAHNGLPQEGAVGGGSGMICHEF CCEEEECCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEC KGGIGTASRRLPADRGGWTVGAIVQANHGKRTSLLVGGYPVGRHLGHIHSPFTPQLPHPG CCCCCCHHHCCCCCCCCEEEEEEEECCCCCCEEEEECCCCHHHHHCCCCCCCCCCCCCCC MGSIVVTLATDAPLLPHQCTRLAQRASIGIARTGGGTEDSSGDIFIAFATGNDGLPPADY CCCEEEEEECCCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCEEEEEECCCCCCCCCCC ADKGAFTTALRMVNNDYISELFAAAAEAVEEAIINALLAANTLSGNGHRAEGLSAGQLLT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH ALEQAGWRA HHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA